RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDCA3-203ENST00000446553 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
CDCA3-203ENST00000446553 KIF3CO14782 793 aa14.81□□□□□ -0.04
CDCA3-203ENST00000446553 SRGNP10124 158 aa14.81□□□□□ -0.04
CDCA3-203ENST00000446553 STYK1Q6J9G0 422 aa14.81□□□□□ -0.04
CDCA3-203ENST00000446553 TPTE2Q6XPS3 522 aa14.81□□□□□ -0.04
CDCA3-203ENST00000446553 NBPF5PQ86XG9 351 aaPredicted RBP14.81□□□□□ -0.04
CDCA3-203ENST00000446553 CNKSR1Q969H4 720 aa14.81□□□□□ -0.04
CDCA3-203ENST00000446553 COL11A2P13942 1736 aaPredicted RBP14.8□□□□□ -0.04
CDCA3-203ENST00000446553 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDCA3-203ENST00000446553 MAP3K15Q6ZN16 1313 aa14.8□□□□□ -0.04
CDCA3-203ENST00000446553 ARFGEF2Q9Y6D5 1785 aa14.8□□□□□ -0.04
CDCA3-203ENST00000446553 NUP98P52948 1817 aa14.8□□□□□ -0.04
CDCA3-203ENST00000446553 CHL1O00533 1208 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 NPHP1O15259 732 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 LMNB1P20700 586 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 SOGA3Q5TF21 947 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
CDCA3-203ENST00000446553 MASTLQ96GX5 879 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 LTBP3Q9NS15 1303 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 RNF181Q9P0P0 153 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 IBTKQ9P2D0 1353 aaPredicted RBP14.79□□□□□ -0.04
CDCA3-203ENST00000446553 ADAMTS8Q9UP79 889 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 CEP350Q5VT06 3117 aa14.79□□□□□ -0.04
CDCA3-203ENST00000446553 FER1L6Q2WGJ9 1857 aa14.78□□□□□ -0.04
CDCA3-203ENST00000446553 RIC1Q4ADV7 1423 aa14.78□□□□□ -0.04
CDCA3-203ENST00000446553 KDM2BQ8NHM5 1336 aa14.78□□□□□ -0.04
CDCA3-203ENST00000446553 SENP3-EIF4A1A0A087X0R7 540 aa14.78□□□□□ -0.04
CDCA3-203ENST00000446553 HLFQ16534 295 aa14.78□□□□□ -0.04
CDCA3-203ENST00000446553 ZNF622Q969S3 477 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDCA3-203ENST00000446553 NYXQ9GZU5 481 aa14.78□□□□□ -0.04
CDCA3-203ENST00000446553 TRIM35Q9UPQ4 493 aa14.78□□□□□ -0.04
CDCA3-203ENST00000446553 NFKBIEO00221 500 aa14.77□□□□□ -0.05
CDCA3-203ENST00000446553 NPR1P16066 1061 aa14.77□□□□□ -0.05
CDCA3-203ENST00000446553 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.05
CDCA3-203ENST00000446553 LRP10Q7Z4F1 713 aa14.77□□□□□ -0.05
CDCA3-203ENST00000446553 RRP7AQ9Y3A4 280 aaKnown RBP14.77□□□□□ -0.05
CDCA3-203ENST00000446553 DICER1Q9UPY3 1922 aaKnown RBP14.76□□□□□ -0.05
CDCA3-203ENST00000446553 SLX4Q8IY92 1834 aa14.76□□□□□ -0.05
CDCA3-203ENST00000446553 TOMM70O94826 608 aa14.76□□□□□ -0.05
CDCA3-203ENST00000446553 HOXB7P09629 217 aa14.76□□□□□ -0.05
CDCA3-203ENST00000446553 PDIA6Q15084 440 aa14.76□□□□□ -0.05
CDCA3-203ENST00000446553 GIGYF2Q6Y7W6 1299 aaKnown RBP14.76□□□□□ -0.05
CDCA3-203ENST00000446553 CCDC146Q8IYE0 955 aa14.76□□□□□ -0.05
CDCA3-203ENST00000446553 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
CDCA3-203ENST00000446553 TNRC6CQ9HCJ0 1690 aaKnown RBP14.75□□□□□ -0.05
CDCA3-203ENST00000446553 RASSF7Q02833 373 aa14.75□□□□□ -0.05
CDCA3-203ENST00000446553 PRPF40BQ6NWY9 871 aaKnown RBP14.75□□□□□ -0.05
CDCA3-203ENST00000446553 TTLL7Q6ZT98 887 aa14.75□□□□□ -0.05
CDCA3-203ENST00000446553 CCDC24Q8N4L8 307 aa14.75□□□□□ -0.05
CDCA3-203ENST00000446553 C7orf43Q8WVR3 580 aa14.75□□□□□ -0.05
CDCA3-203ENST00000446553 C21orf2O43822 256 aa14.74□□□□□ -0.05
CDCA3-203ENST00000446553 MYL6BP14649 208 aa14.74□□□□□ -0.05
CDCA3-203ENST00000446553 HSPA6P17066 643 aa14.74□□□□□ -0.05
CDCA3-203ENST00000446553 CRY2Q49AN0 593 aa14.74□□□□□ -0.05
CDCA3-203ENST00000446553 PARP10Q53GL7 1025 aa14.74□□□□□ -0.05
CDCA3-203ENST00000446553 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
CDCA3-203ENST00000446553 CFAP44Q96MT7 982 aa14.74□□□□□ -0.05
CDCA3-203ENST00000446553 GLTPD2A6NH11 291 aa14.73□□□□□ -0.05
CDCA3-203ENST00000446553 ALDH1B1P30837 517 aa14.73□□□□□ -0.05
CDCA3-203ENST00000446553 PRELPP51888 382 aa14.73□□□□□ -0.05
CDCA3-203ENST00000446553 NEUROD2Q15784 382 aa14.73□□□□□ -0.05
CDCA3-203ENST00000446553 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
CDCA3-203ENST00000446553 RBM46Q8TBY0 533 aaKnown RBP14.73□□□□□ -0.05
CDCA3-203ENST00000446553 NMRK2Q9NPI5 230 aa14.73□□□□□ -0.05
CDCA3-203ENST00000446553 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
CDCA3-203ENST00000446553 EIF2S2P20042 333 aaKnown RBP14.72□□□□□ -0.05
CDCA3-203ENST00000446553 GTF2E1P29083 439 aaPredicted RBP14.72□□□□□ -0.05
CDCA3-203ENST00000446553 CALD1Q05682 793 aaKnown RBP14.72□□□□□ -0.05
CDCA3-203ENST00000446553 TAOK3Q9H2K8 898 aa14.72□□□□□ -0.05
CDCA3-203ENST00000446553 DDX21Q9NR30 783 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDCA3-203ENST00000446553 CACNA1SQ13698 1873 aa14.72□□□□□ -0.05
CDCA3-203ENST00000446553 UBN2Q6ZU65 1347 aa14.71□□□□□ -0.05
CDCA3-203ENST00000446553 ZNF853P0CG23 659 aa14.71□□□□□ -0.05
CDCA3-203ENST00000446553 HOXA10P31260 410 aaPredicted RBP14.71□□□□□ -0.05
CDCA3-203ENST00000446553 CCDC93Q567U6 631 aa14.71□□□□□ -0.05
CDCA3-203ENST00000446553 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.05
CDCA3-203ENST00000446553 PPP1R42Q7Z4L9 355 aa14.71□□□□□ -0.05
CDCA3-203ENST00000446553 ZBTB3Q9H5J0 574 aa14.71□□□□□ -0.05
CDCA3-203ENST00000446553 TIAM2Q8IVF5 1701 aa14.71□□□□□ -0.05
CDCA3-203ENST00000446553 NTSR2O95665 410 aa14.7□□□□□ -0.06
CDCA3-203ENST00000446553 FSTL1Q12841 308 aa14.7□□□□□ -0.06
CDCA3-203ENST00000446553 GRIPAP1Q4V328 841 aa14.7□□□□□ -0.06
CDCA3-203ENST00000446553 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
CDCA3-203ENST00000446553 CC2D2BQ6DHV5 1058 aa14.7□□□□□ -0.06
CDCA3-203ENST00000446553 C16orf71Q8IYS4 520 aaPredicted RBP14.7□□□□□ -0.06
CDCA3-203ENST00000446553 ABCC12Q96J65 1359 aa14.7□□□□□ -0.06
CDCA3-203ENST00000446553 PROSER3Q2NL68 480 aa14.69□□□□□ -0.06
CDCA3-203ENST00000446553 SLC10A5Q5PT55 438 aa14.69□□□□□ -0.06
CDCA3-203ENST00000446553 SUSD4Q5VX71 490 aa14.69□□□□□ -0.06
CDCA3-203ENST00000446553 DPY19L2Q6NUT2 758 aa14.69□□□□□ -0.06
CDCA3-203ENST00000446553 RTKN2Q8IZC4 609 aa14.69□□□□□ -0.06
CDCA3-203ENST00000446553 IFT57Q9NWB7 429 aa14.69□□□□□ -0.06
CDCA3-203ENST00000446553 ANKRD36CQ5JPF3 1778 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 APAF1O14727 1248 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 VEGFAP15692 232 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-203ENST00000446553 GPTP24298 496 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 GNAI1P63096 354 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 FKBP4Q02790 459 aaKnown RBP eCLIP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms