RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SYT17Q9BSW7 474 aa16.71■□□□□ 0.27
PDLIM2-212ENST00000443561 CHPF2Q9P2E5 772 aa16.71■□□□□ 0.27
PDLIM2-212ENST00000443561 CACNA1FO60840 1977 aa16.7■□□□□ 0.26
PDLIM2-212ENST00000443561 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
PDLIM2-212ENST00000443561 POLD1P28340 1107 aa16.7■□□□□ 0.26
PDLIM2-212ENST00000443561 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
PDLIM2-212ENST00000443561 NGEFQ8N5V2 710 aa16.7■□□□□ 0.26
PDLIM2-212ENST00000443561 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
PDLIM2-212ENST00000443561 A0A087WZG4 1122 aa16.69■□□□□ 0.26
PDLIM2-212ENST00000443561 ZPR1O75312 459 aa16.69■□□□□ 0.26
PDLIM2-212ENST00000443561 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDLIM2-212ENST00000443561 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-212ENST00000443561 EXOSC9Q06265 439 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-212ENST00000443561 ATP10DQ9P241 1426 aa16.68■□□□□ 0.26
PDLIM2-212ENST00000443561 MAP3K15Q6ZN16 1313 aa16.68■□□□□ 0.26
PDLIM2-212ENST00000443561 TRMT2AQ8IZ69 625 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-212ENST00000443561 XAGE3Q8WTP9 111 aa16.67■□□□□ 0.26
PDLIM2-212ENST00000443561 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
PDLIM2-212ENST00000443561 LAMB2P55268 1798 aa16.66■□□□□ 0.26
PDLIM2-212ENST00000443561 VAMP4O75379 141 aa16.66■□□□□ 0.26
PDLIM2-212ENST00000443561 SLFN5Q08AF3 891 aa16.66■□□□□ 0.26
PDLIM2-212ENST00000443561 ZBTB3Q9H5J0 574 aa16.66■□□□□ 0.26
PDLIM2-212ENST00000443561 PHAXQ9H814 394 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-212ENST00000443561 TCERG1O14776 1098 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-212ENST00000443561 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-212ENST00000443561 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
PDLIM2-212ENST00000443561 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
PDLIM2-212ENST00000443561 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
PDLIM2-212ENST00000443561 RGL2O15211 777 aa16.64■□□□□ 0.25
PDLIM2-212ENST00000443561 SERPINB2P05120 415 aa16.64■□□□□ 0.25
PDLIM2-212ENST00000443561 CACNA1SQ13698 1873 aa16.64■□□□□ 0.25
PDLIM2-212ENST00000443561 DDX60Q8IY21 1712 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-212ENST00000443561 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 CLEC4GQ6UXB4 293 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 GIGYF2Q6Y7W6 1299 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 G2E3Q7L622 706 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 KLHL34Q8N239 644 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 CCDC24Q8N4L8 307 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
PDLIM2-212ENST00000443561 KCNA3P22001 575 aa16.62■□□□□ 0.25
PDLIM2-212ENST00000443561 AIMP1Q12904 312 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-212ENST00000443561 PRR5LQ6MZQ0 368 aa16.62■□□□□ 0.25
PDLIM2-212ENST00000443561 ZNF34Q8IZ26 560 aa16.62■□□□□ 0.25
PDLIM2-212ENST00000443561 MYH16Q9H6N6 1097 aa16.61■□□□□ 0.25
PDLIM2-212ENST00000443561 ADCY9O60503 1353 aa16.61■□□□□ 0.25
PDLIM2-212ENST00000443561 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-212ENST00000443561 E9PSI1 815 aa16.6■□□□□ 0.25
PDLIM2-212ENST00000443561 COL4A1P02462 1669 aa16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 GPTP24298 496 aa16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 KIF6Q6ZMV9 814 aa16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 HYPKQ9NX55 129 aa16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 NIP7Q9Y221 180 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM2-212ENST00000443561 NTSR2O95665 410 aa16.58■□□□□ 0.24
PDLIM2-212ENST00000443561 DPEP1P16444 411 aa16.58■□□□□ 0.24
PDLIM2-212ENST00000443561 SUSD4Q5VX71 490 aa16.58■□□□□ 0.24
PDLIM2-212ENST00000443561 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.24
PDLIM2-212ENST00000443561 IBTKQ9P2D0 1353 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-212ENST00000443561 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
PDLIM2-212ENST00000443561 A0A0G2JLW4 131 aa16.57■□□□□ 0.24
PDLIM2-212ENST00000443561 CHRNA5P30532 468 aa16.57■□□□□ 0.24
PDLIM2-212ENST00000443561 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
PDLIM2-212ENST00000443561 WWC3Q9ULE0 1092 aa16.57■□□□□ 0.24
PDLIM2-212ENST00000443561 ZNF652Q9Y2D9 606 aa16.57■□□□□ 0.24
PDLIM2-212ENST00000443561 TAF1P21675 1872 aa16.56■□□□□ 0.24
PDLIM2-212ENST00000443561 RIC1Q4ADV7 1423 aa16.56■□□□□ 0.24
PDLIM2-212ENST00000443561 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
PDLIM2-212ENST00000443561 ZNF428Q96B54 188 aa16.56■□□□□ 0.24
PDLIM2-212ENST00000443561 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
PDLIM2-212ENST00000443561 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 TCIRG1Q13488 830 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 NLRP10Q86W26 655 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 CHD4Q14839 1912 aa16.55■□□□□ 0.24
PDLIM2-212ENST00000443561 UTRNP46939 3433 aa16.54■□□□□ 0.24
PDLIM2-212ENST00000443561 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
PDLIM2-212ENST00000443561 TGFB2P61812 414 aa16.54■□□□□ 0.24
PDLIM2-212ENST00000443561 ATP5J2-PTCD1G3V325 749 aa16.53■□□□□ 0.24
PDLIM2-212ENST00000443561 FLIIQ13045 1269 aa16.53■□□□□ 0.24
PDLIM2-212ENST00000443561 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
PDLIM2-212ENST00000443561 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
PDLIM2-212ENST00000443561 NBPF5PQ86XG9 351 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-212ENST00000443561 KLRG2A4D1S0 409 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-212ENST00000443561 IGKV5-2P06315 115 aa16.52■□□□□ 0.24
PDLIM2-212ENST00000443561 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.24
PDLIM2-212ENST00000443561 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
PDLIM2-212ENST00000443561 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
PDLIM2-212ENST00000443561 MYH3P11055 1940 aa16.51■□□□□ 0.23
PDLIM2-212ENST00000443561 SBF1O95248 1867 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms