RNA–Protein interactions for RNA: ENST00000443037.1

SOX9-AS1-206, SOX9 antisense RNA 1, humanhuman

TSL 2

Gene SOX9-AS1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-206ENST00000443037 ARHGAP27Q6ZUM4 889 aa18.49■□□□□ 0.55
SOX9-AS1-206ENST00000443037 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
SOX9-AS1-206ENST00000443037 LAMB4A4D0S4 1761 aa18.49■□□□□ 0.55
SOX9-AS1-206ENST00000443037 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
SOX9-AS1-206ENST00000443037 FXR2P51116 673 aaKnown RBP eCLIP18.48■□□□□ 0.55
SOX9-AS1-206ENST00000443037 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
SOX9-AS1-206ENST00000443037 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
SOX9-AS1-206ENST00000443037 BRIP1Q9BX63 1249 aa18.48■□□□□ 0.55
SOX9-AS1-206ENST00000443037 H0YIN7 160 aa18.47■□□□□ 0.55
SOX9-AS1-206ENST00000443037 PRR29P0C7W0 189 aa18.47■□□□□ 0.55
SOX9-AS1-206ENST00000443037 CHRNA5P30532 468 aa18.47■□□□□ 0.55
SOX9-AS1-206ENST00000443037 PDE6BP35913 854 aa18.47■□□□□ 0.55
SOX9-AS1-206ENST00000443037 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
SOX9-AS1-206ENST00000443037 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
SOX9-AS1-206ENST00000443037 ANKRD31Q8N7Z5 1873 aa18.47■□□□□ 0.55
SOX9-AS1-206ENST00000443037 ZNF330Q9Y3S2 320 aaPredicted RBP18.46■□□□□ 0.55
SOX9-AS1-206ENST00000443037 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
SOX9-AS1-206ENST00000443037 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
SOX9-AS1-206ENST00000443037 LMOD3Q0VAK6 560 aa18.45■□□□□ 0.54
SOX9-AS1-206ENST00000443037 TTLL6Q8N841 843 aa18.45■□□□□ 0.54
SOX9-AS1-206ENST00000443037 CCDC88AQ3V6T2 1871 aa18.44■□□□□ 0.54
SOX9-AS1-206ENST00000443037 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
SOX9-AS1-206ENST00000443037 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
SOX9-AS1-206ENST00000443037 POTEHQ6S545 545 aa18.44■□□□□ 0.54
SOX9-AS1-206ENST00000443037 BICDL1Q6ZP65 573 aa18.44■□□□□ 0.54
SOX9-AS1-206ENST00000443037 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
SOX9-AS1-206ENST00000443037 NUP98P52948 1817 aa18.44■□□□□ 0.54
SOX9-AS1-206ENST00000443037 RIPK4P57078 832 aa18.43■□□□□ 0.54
SOX9-AS1-206ENST00000443037 PRR5LQ6MZQ0 368 aa18.43■□□□□ 0.54
SOX9-AS1-206ENST00000443037 C2CD5Q86YS7 1000 aa18.43■□□□□ 0.54
SOX9-AS1-206ENST00000443037 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
SOX9-AS1-206ENST00000443037 ERBB4Q15303 1308 aa18.43■□□□□ 0.54
SOX9-AS1-206ENST00000443037 ZC3H4Q9UPT8 1303 aaKnown RBP18.43■□□□□ 0.54
SOX9-AS1-206ENST00000443037 ERVV-1B6SEH8 477 aa18.42■□□□□ 0.54
SOX9-AS1-206ENST00000443037 TMPOP42166 694 aaKnown RBP18.42■□□□□ 0.54
SOX9-AS1-206ENST00000443037 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
SOX9-AS1-206ENST00000443037 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
SOX9-AS1-206ENST00000443037 ST5P78524 1137 aa18.41■□□□□ 0.54
SOX9-AS1-206ENST00000443037 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
SOX9-AS1-206ENST00000443037 C9orf131Q5VYM1 1079 aa18.4■□□□□ 0.54
SOX9-AS1-206ENST00000443037 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
SOX9-AS1-206ENST00000443037 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
SOX9-AS1-206ENST00000443037 DICER1Q9UPY3 1922 aaKnown RBP18.4■□□□□ 0.54
SOX9-AS1-206ENST00000443037 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
SOX9-AS1-206ENST00000443037 FER1L6Q2WGJ9 1857 aa18.39■□□□□ 0.54
SOX9-AS1-206ENST00000443037 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.53
SOX9-AS1-206ENST00000443037 STYK1Q6J9G0 422 aa18.39■□□□□ 0.53
SOX9-AS1-206ENST00000443037 CNKSR1Q969H4 720 aa18.39■□□□□ 0.53
SOX9-AS1-206ENST00000443037 KIF3CO14782 793 aa18.38■□□□□ 0.53
SOX9-AS1-206ENST00000443037 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
SOX9-AS1-206ENST00000443037 THUMPD2Q9BTF0 503 aaKnown RBP18.38■□□□□ 0.53
SOX9-AS1-206ENST00000443037 NPHP1O15259 732 aa18.37■□□□□ 0.53
SOX9-AS1-206ENST00000443037 SRGNP10124 158 aa18.37■□□□□ 0.53
SOX9-AS1-206ENST00000443037 LMNB1P20700 586 aa18.37■□□□□ 0.53
SOX9-AS1-206ENST00000443037 PIP4K2AP48426 406 aaPredicted RBP18.37■□□□□ 0.53
SOX9-AS1-206ENST00000443037 WDR43Q15061 677 aaKnown RBP eCLIP18.37■□□□□ 0.53
SOX9-AS1-206ENST00000443037 MASTLQ96GX5 879 aa18.37■□□□□ 0.53
SOX9-AS1-206ENST00000443037 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
SOX9-AS1-206ENST00000443037 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 COL11A2P13942 1736 aaPredicted RBP18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 SOGA3Q5TF21 947 aa18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 SLX4Q8IY92 1834 aa18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 KDM2BQ8NHM5 1336 aa18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 ZNF526Q8TF50 670 aaPredicted RBP18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 CEP350Q5VT06 3117 aa18.36■□□□□ 0.53
SOX9-AS1-206ENST00000443037 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
SOX9-AS1-206ENST00000443037 TOMM70O94826 608 aa18.35■□□□□ 0.53
SOX9-AS1-206ENST00000443037 CHADLQ6NUI6 762 aa18.35■□□□□ 0.53
SOX9-AS1-206ENST00000443037 ZNF622Q969S3 477 aaKnown RBP eCLIP18.35■□□□□ 0.53
SOX9-AS1-206ENST00000443037 RNF181Q9P0P0 153 aa18.35■□□□□ 0.53
SOX9-AS1-206ENST00000443037 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
SOX9-AS1-206ENST00000443037 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
SOX9-AS1-206ENST00000443037 CHL1O00533 1208 aa18.34■□□□□ 0.53
SOX9-AS1-206ENST00000443037 HLFQ16534 295 aa18.34■□□□□ 0.53
SOX9-AS1-206ENST00000443037 KIF6Q6ZMV9 814 aa18.34■□□□□ 0.53
SOX9-AS1-206ENST00000443037 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
SOX9-AS1-206ENST00000443037 CACNA1SQ13698 1873 aa18.33■□□□□ 0.53
SOX9-AS1-206ENST00000443037 IBTKQ9P2D0 1353 aaPredicted RBP18.33■□□□□ 0.53
SOX9-AS1-206ENST00000443037 PRKAR2AP13861 404 aaKnown RBP18.33■□□□□ 0.52
SOX9-AS1-206ENST00000443037 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
SOX9-AS1-206ENST00000443037 TNRC6CQ9HCJ0 1690 aaKnown RBP18.32■□□□□ 0.52
SOX9-AS1-206ENST00000443037 NPR1P16066 1061 aa18.32■□□□□ 0.52
SOX9-AS1-206ENST00000443037 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
SOX9-AS1-206ENST00000443037 NFKBIEO00221 500 aa18.31■□□□□ 0.52
SOX9-AS1-206ENST00000443037 HOXB7P09629 217 aa18.31■□□□□ 0.52
SOX9-AS1-206ENST00000443037 HSPA6P17066 643 aa18.31■□□□□ 0.52
SOX9-AS1-206ENST00000443037 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
SOX9-AS1-206ENST00000443037 LRP10Q7Z4F1 713 aa18.31■□□□□ 0.52
SOX9-AS1-206ENST00000443037 RIC1Q4ADV7 1423 aa18.31■□□□□ 0.52
SOX9-AS1-206ENST00000443037 ALDH1B1P30837 517 aa18.3■□□□□ 0.52
SOX9-AS1-206ENST00000443037 PDIA6Q15084 440 aa18.3■□□□□ 0.52
SOX9-AS1-206ENST00000443037 ZNF34Q8IZ26 560 aa18.3■□□□□ 0.52
SOX9-AS1-206ENST00000443037 CCDC24Q8N4L8 307 aa18.3■□□□□ 0.52
SOX9-AS1-206ENST00000443037 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
SOX9-AS1-206ENST00000443037 GLTPD2A6NH11 291 aa18.29■□□□□ 0.52
SOX9-AS1-206ENST00000443037 C21orf2O43822 256 aa18.29■□□□□ 0.52
SOX9-AS1-206ENST00000443037 MYL6BP14649 208 aa18.29■□□□□ 0.52
SOX9-AS1-206ENST00000443037 GTF2E1P29083 439 aaPredicted RBP18.29■□□□□ 0.52
SOX9-AS1-206ENST00000443037 CRY2Q49AN0 593 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms