RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
CDCA4P3-201ENST00000442572 DDX21Q9NR30 783 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDCA4P3-201ENST00000442572 CCER2I3L3R5 266 aa16.28■□□□□ 0.2
CDCA4P3-201ENST00000442572 MYL6BP14649 208 aa16.28■□□□□ 0.2
CDCA4P3-201ENST00000442572 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDCA4P3-201ENST00000442572 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
CDCA4P3-201ENST00000442572 PDIA6Q15084 440 aa16.28■□□□□ 0.2
CDCA4P3-201ENST00000442572 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
CDCA4P3-201ENST00000442572 ATP10DQ9P241 1426 aa16.28■□□□□ 0.2
CDCA4P3-201ENST00000442572 DUSP27Q5VZP5 1158 aa16.27■□□□□ 0.2
CDCA4P3-201ENST00000442572 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
CDCA4P3-201ENST00000442572 LRP10Q7Z4F1 713 aa16.27■□□□□ 0.2
CDCA4P3-201ENST00000442572 WDR63Q8IWG1 891 aa16.27■□□□□ 0.2
CDCA4P3-201ENST00000442572 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.2
CDCA4P3-201ENST00000442572 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.2
CDCA4P3-201ENST00000442572 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
CDCA4P3-201ENST00000442572 DPEP1P16444 411 aa16.26■□□□□ 0.19
CDCA4P3-201ENST00000442572 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
CDCA4P3-201ENST00000442572 BRIP1Q9BX63 1249 aa16.26■□□□□ 0.19
CDCA4P3-201ENST00000442572 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
CDCA4P3-201ENST00000442572 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
CDCA4P3-201ENST00000442572 IBTKQ9P2D0 1353 aaPredicted RBP16.26■□□□□ 0.19
CDCA4P3-201ENST00000442572 KCNA3P22001 575 aa16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 YY1P25490 414 aa16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 PDE6BP35913 854 aa16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 ST5P78524 1137 aa16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 PRR5LQ6MZQ0 368 aa16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 GIGYF2Q6Y7W6 1299 aaKnown RBP16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 CNBD1Q8NA66 436 aa16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
CDCA4P3-201ENST00000442572 HLFQ16534 295 aa16.24■□□□□ 0.19
CDCA4P3-201ENST00000442572 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
CDCA4P3-201ENST00000442572 TPTE2Q6XPS3 522 aa16.24■□□□□ 0.19
CDCA4P3-201ENST00000442572 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
CDCA4P3-201ENST00000442572 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
CDCA4P3-201ENST00000442572 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
CDCA4P3-201ENST00000442572 CACNA1SQ13698 1873 aa16.23■□□□□ 0.19
CDCA4P3-201ENST00000442572 H0YIN7 160 aa16.23■□□□□ 0.19
CDCA4P3-201ENST00000442572 NPHP1O15259 732 aa16.23■□□□□ 0.19
CDCA4P3-201ENST00000442572 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
CDCA4P3-201ENST00000442572 NBPF5PQ86XG9 351 aaPredicted RBP16.23■□□□□ 0.19
CDCA4P3-201ENST00000442572 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
CDCA4P3-201ENST00000442572 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
CDCA4P3-201ENST00000442572 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
CDCA4P3-201ENST00000442572 CHPF2Q9P2E5 772 aa16.22■□□□□ 0.19
CDCA4P3-201ENST00000442572 BCS1LQ9Y276 419 aa16.22■□□□□ 0.19
CDCA4P3-201ENST00000442572 RIC1Q4ADV7 1423 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 SBF1O95248 1867 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 ZNF34Q8IZ26 560 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.19
CDCA4P3-201ENST00000442572 RNF123Q5XPI4 1314 aa16.2■□□□□ 0.18
CDCA4P3-201ENST00000442572 CHRNA5P30532 468 aa16.2■□□□□ 0.18
CDCA4P3-201ENST00000442572 C2CD5Q86YS7 1000 aa16.2■□□□□ 0.18
CDCA4P3-201ENST00000442572 C8orf58Q8NAV2 365 aa16.2■□□□□ 0.18
CDCA4P3-201ENST00000442572 XAGE3Q8WTP9 111 aa16.2■□□□□ 0.18
CDCA4P3-201ENST00000442572 ANXA1P04083 346 aa16.19■□□□□ 0.18
CDCA4P3-201ENST00000442572 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
CDCA4P3-201ENST00000442572 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
CDCA4P3-201ENST00000442572 PLBD2Q8NHP8 589 aa16.19■□□□□ 0.18
CDCA4P3-201ENST00000442572 MYH16Q9H6N6 1097 aa16.19■□□□□ 0.18
CDCA4P3-201ENST00000442572 CCDC88AQ3V6T2 1871 aa16.18■□□□□ 0.18
CDCA4P3-201ENST00000442572 KLRG2A4D1S0 409 aaPredicted RBP16.18■□□□□ 0.18
CDCA4P3-201ENST00000442572 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
CDCA4P3-201ENST00000442572 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
CDCA4P3-201ENST00000442572 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
CDCA4P3-201ENST00000442572 TSR2Q969E8 191 aaKnown RBP16.18■□□□□ 0.18
CDCA4P3-201ENST00000442572 FER1L6Q2WGJ9 1857 aa16.18■□□□□ 0.18
CDCA4P3-201ENST00000442572 ELL2O00472 640 aaPredicted RBP16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 SRGNP10124 158 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 GOLGA2Q08379 1002 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 CNKSR1Q969H4 720 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 SLX4Q8IY92 1834 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 UBN2Q6ZU65 1347 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 ZNF521Q96K83 1311 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
CDCA4P3-201ENST00000442572 LAMB2P55268 1798 aa16.16■□□□□ 0.18
CDCA4P3-201ENST00000442572 TNRC6CQ9HCJ0 1690 aaKnown RBP16.16■□□□□ 0.18
CDCA4P3-201ENST00000442572 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
CDCA4P3-201ENST00000442572 MASTLQ96GX5 879 aa16.16■□□□□ 0.18
CDCA4P3-201ENST00000442572 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
CDCA4P3-201ENST00000442572 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
CDCA4P3-201ENST00000442572 UTRNP46939 3433 aa16.16■□□□□ 0.18
CDCA4P3-201ENST00000442572 DICER1Q9UPY3 1922 aaKnown RBP16.15■□□□□ 0.18
CDCA4P3-201ENST00000442572 NTSR2O95665 410 aa16.15■□□□□ 0.18
CDCA4P3-201ENST00000442572 NPR1P16066 1061 aa16.15■□□□□ 0.18
CDCA4P3-201ENST00000442572 GPTP24298 496 aa16.15■□□□□ 0.18
CDCA4P3-201ENST00000442572 SUSD4Q5VX71 490 aa16.15■□□□□ 0.18
CDCA4P3-201ENST00000442572 TSPYL6Q8N831 410 aa16.15■□□□□ 0.18
CDCA4P3-201ENST00000442572 WWC3Q9ULE0 1092 aa16.15■□□□□ 0.18
CDCA4P3-201ENST00000442572 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
CDCA4P3-201ENST00000442572 TRIM28Q13263 835 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms