RNA–Protein interactions for RNA: ENST00000441400.5

AFF3-212, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-212ENST00000441400 C9orf131Q5VYM1 1079 aa35.14■■■■□ 3.22
AFF3-212ENST00000441400 NPHP1O15259 732 aa35.13■■■■□ 3.21
AFF3-212ENST00000441400 ADAMTS8Q9UP79 889 aa35.13■■■■□ 3.21
AFF3-212ENST00000441400 ERBB4Q15303 1308 aa35.12■■■■□ 3.21
AFF3-212ENST00000441400 NBPF5PQ86XG9 351 aaPredicted RBP35.11■■■■□ 3.21
AFF3-212ENST00000441400 CCDC24Q8N4L8 307 aa35.11■■■■□ 3.21
AFF3-212ENST00000441400 RRP7AQ9Y3A4 280 aaKnown RBP35.11■■■■□ 3.21
AFF3-212ENST00000441400 NIP7Q9Y221 180 aaKnown RBP eCLIP35.1■■■■□ 3.21
AFF3-212ENST00000441400 NUP98P52948 1817 aa35.1■■■■□ 3.21
AFF3-212ENST00000441400 ERVV-1B6SEH8 477 aa35.09■■■■□ 3.21
AFF3-212ENST00000441400 NEUROD2Q15784 382 aa35.08■■■■□ 3.21
AFF3-212ENST00000441400 ZNF622Q969S3 477 aaKnown RBP eCLIP35.08■■■■□ 3.21
AFF3-212ENST00000441400 HLFQ16534 295 aa35.07■■■■□ 3.2
AFF3-212ENST00000441400 RNF181Q9P0P0 153 aa35.07■■■■□ 3.2
AFF3-212ENST00000441400 ARFGEF2Q9Y6D5 1785 aa35.07■■■■□ 3.2
AFF3-212ENST00000441400 MAP3K15Q6ZN16 1313 aa35.06■■■■□ 3.2
AFF3-212ENST00000441400 TPTE2Q6XPS3 522 aa35.06■■■■□ 3.2
AFF3-212ENST00000441400 TRIM35Q9UPQ4 493 aa35.06■■■■□ 3.2
AFF3-212ENST00000441400 KIF3CO14782 793 aa35.05■■■■□ 3.2
AFF3-212ENST00000441400 SRGNP10124 158 aa35.05■■■■□ 3.2
AFF3-212ENST00000441400 STYK1Q6J9G0 422 aa35.05■■■■□ 3.2
AFF3-212ENST00000441400 SENP3-EIF4A1A0A087X0R7 540 aa35.04■■■■□ 3.2
AFF3-212ENST00000441400 KIF6Q6ZMV9 814 aa35.04■■■■□ 3.2
AFF3-212ENST00000441400 NGEFQ8N5V2 710 aa35.04■■■■□ 3.2
AFF3-212ENST00000441400 CHL1O00533 1208 aa35.03■■■■□ 3.2
AFF3-212ENST00000441400 MYL6BP14649 208 aa35.03■■■■□ 3.2
AFF3-212ENST00000441400 CNKSR1Q969H4 720 aa35.03■■■■□ 3.2
AFF3-212ENST00000441400 ZC3H4Q9UPT8 1303 aaKnown RBP35.03■■■■□ 3.2
AFF3-212ENST00000441400 LMNB1P20700 586 aa35.02■■■■□ 3.2
AFF3-212ENST00000441400 RASSF7Q02833 373 aa35.02■■■■□ 3.2
AFF3-212ENST00000441400 TTLL7Q6ZT98 887 aa35.02■■■■□ 3.2
AFF3-212ENST00000441400 MASTLQ96GX5 879 aa35.02■■■■□ 3.2
AFF3-212ENST00000441400 CACNA1SQ13698 1873 aa35.01■■■■□ 3.2
AFF3-212ENST00000441400 FER1L6Q2WGJ9 1857 aa35.01■■■■□ 3.2
AFF3-212ENST00000441400 KLRG2A4D1S0 409 aaPredicted RBP35.01■■■■□ 3.2
AFF3-212ENST00000441400 SLX4Q8IY92 1834 aa35.01■■■■□ 3.19
AFF3-212ENST00000441400 CCDC88AQ3V6T2 1871 aa35.01■■■■□ 3.19
AFF3-212ENST00000441400 LRP10Q7Z4F1 713 aa34.99■■■■□ 3.19
AFF3-212ENST00000441400 NFKBIEO00221 500 aa34.98■■■■□ 3.19
AFF3-212ENST00000441400 PDIA6Q15084 440 aa34.98■■■■□ 3.19
AFF3-212ENST00000441400 IBTKQ9P2D0 1353 aaPredicted RBP34.98■■■■□ 3.19
AFF3-212ENST00000441400 C21orf2O43822 256 aa34.97■■■■□ 3.19
AFF3-212ENST00000441400 EIF2S2P20042 333 aaKnown RBP34.97■■■■□ 3.19
AFF3-212ENST00000441400 NYXQ9GZU5 481 aa34.97■■■■□ 3.19
AFF3-212ENST00000441400 PRELPP51888 382 aa34.96■■■■□ 3.19
AFF3-212ENST00000441400 PRPF40BQ6NWY9 871 aaKnown RBP34.96■■■■□ 3.19
AFF3-212ENST00000441400 KDM2BQ8NHM5 1336 aa34.96■■■■□ 3.19
AFF3-212ENST00000441400 TIAM2Q8IVF5 1701 aa34.95■■■■□ 3.19
AFF3-212ENST00000441400 NPR1P16066 1061 aa34.95■■■■□ 3.19
AFF3-212ENST00000441400 ZBTB3Q9H5J0 574 aa34.95■■■■□ 3.19
AFF3-212ENST00000441400 NMRK2Q9NPI5 230 aa34.95■■■■□ 3.19
AFF3-212ENST00000441400 TNRC6CQ9HCJ0 1690 aaKnown RBP34.95■■■■□ 3.18
AFF3-212ENST00000441400 FAM177BA6PVY3 158 aa34.94■■■■□ 3.18
AFF3-212ENST00000441400 SOGA3Q5TF21 947 aa34.94■■■■□ 3.18
AFF3-212ENST00000441400 GIGYF2Q6Y7W6 1299 aaKnown RBP34.94■■■■□ 3.18
AFF3-212ENST00000441400 DICER1Q9UPY3 1922 aaKnown RBP34.94■■■■□ 3.18
AFF3-212ENST00000441400 LTBP3Q9NS15 1303 aa34.93■■■■□ 3.18
AFF3-212ENST00000441400 GTF2E1P29083 439 aaPredicted RBP34.93■■■■□ 3.18
AFF3-212ENST00000441400 ZNF34Q8IZ26 560 aa34.92■■■■□ 3.18
AFF3-212ENST00000441400 CFAP44Q96MT7 982 aa34.92■■■■□ 3.18
AFF3-212ENST00000441400 LAS1LQ9Y4W2 734 aaKnown RBP34.92■■■■□ 3.18
AFF3-212ENST00000441400 RIC1Q4ADV7 1423 aa34.91■■■■□ 3.18
AFF3-212ENST00000441400 UBN2Q6ZU65 1347 aa34.91■■■■□ 3.18
AFF3-212ENST00000441400 PROSER3Q2NL68 480 aa34.91■■■■□ 3.18
AFF3-212ENST00000441400 ZNF219Q9P2Y4 722 aaPredicted RBP34.91■■■■□ 3.18
AFF3-212ENST00000441400 TOMM70O94826 608 aa34.9■■■■□ 3.18
AFF3-212ENST00000441400 HOXB7P09629 217 aa34.9■■■■□ 3.18
AFF3-212ENST00000441400 ABCC12Q96J65 1359 aa34.89■■■■□ 3.18
AFF3-212ENST00000441400 APAF1O14727 1248 aa34.89■■■■□ 3.18
AFF3-212ENST00000441400 GPTP24298 496 aa34.88■■■■□ 3.17
AFF3-212ENST00000441400 KRT24Q2M2I5 525 aa34.88■■■■□ 3.17
AFF3-212ENST00000441400 C7orf43Q8WVR3 580 aa34.88■■■■□ 3.17
AFF3-212ENST00000441400 TAOK3Q9H2K8 898 aa34.88■■■■□ 3.17
AFF3-212ENST00000441400 ANKRD36CQ5JPF3 1778 aa34.87■■■■□ 3.17
AFF3-212ENST00000441400 ANXA1P04083 346 aa34.87■■■■□ 3.17
AFF3-212ENST00000441400 CRY2Q49AN0 593 aa34.87■■■■□ 3.17
AFF3-212ENST00000441400 DDX21Q9NR30 783 aaKnown RBP eCLIP34.87■■■■□ 3.17
AFF3-212ENST00000441400 HSPA6P17066 643 aa34.86■■■■□ 3.17
AFF3-212ENST00000441400 PARP10Q53GL7 1025 aa34.86■■■■□ 3.17
AFF3-212ENST00000441400 NUTM1Q86Y26 1132 aa34.86■■■■□ 3.17
AFF3-212ENST00000441400 ZNF316A6NFI3 1004 aaPredicted RBP34.85■■■■□ 3.17
AFF3-212ENST00000441400 ZNF853P0CG23 659 aa34.85■■■■□ 3.17
AFF3-212ENST00000441400 CALD1Q05682 793 aaKnown RBP34.85■■■■□ 3.17
AFF3-212ENST00000441400 ERFEQ4G0M1 354 aa34.85■■■■□ 3.17
AFF3-212ENST00000441400 SUSD4Q5VX71 490 aa34.85■■■■□ 3.17
AFF3-212ENST00000441400 NECTIN2Q92692 538 aa34.85■■■■□ 3.17
AFF3-212ENST00000441400 GLTPD2A6NH11 291 aa34.84■■■■□ 3.17
AFF3-212ENST00000441400 ALDH1B1P30837 517 aa34.84■■■■□ 3.17
AFF3-212ENST00000441400 NTSR2O95665 410 aa34.83■■■■□ 3.17
AFF3-212ENST00000441400 COPS6Q7L5N1 327 aa34.83■■■■□ 3.17
AFF3-212ENST00000441400 PPP1R42Q7Z4L9 355 aa34.83■■■■□ 3.17
AFF3-212ENST00000441400 MBIPQ9NS73 344 aa34.83■■■■□ 3.17
AFF3-212ENST00000441400 CCDC93Q567U6 631 aa34.82■■■■□ 3.16
AFF3-212ENST00000441400 XAGE3Q8WTP9 111 aa34.82■■■■□ 3.16
AFF3-212ENST00000441400 IFT57Q9NWB7 429 aa34.82■■■■□ 3.16
AFF3-212ENST00000441400 HSP90AB3PQ58FF7 597 aa34.81■■■■□ 3.16
AFF3-212ENST00000441400 HDGFL1Q5TGJ6 251 aa34.81■■■■□ 3.16
AFF3-212ENST00000441400 RBM46Q8TBY0 533 aaKnown RBP34.81■■■■□ 3.16
AFF3-212ENST00000441400 CCDC184Q52MB2 194 aa34.8■■■■□ 3.16
AFF3-212ENST00000441400 C16orf71Q8IYS4 520 aaPredicted RBP34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms