RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
UBE2F-214ENST00000440223 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
UBE2F-214ENST00000440223 HOXB7P09629 217 aa20.46■□□□□ 0.87
UBE2F-214ENST00000440223 ERICH6BQ5W0A0 696 aa20.46■□□□□ 0.87
UBE2F-214ENST00000440223 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
UBE2F-214ENST00000440223 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
UBE2F-214ENST00000440223 C10orf71Q711Q0 1435 aa20.45■□□□□ 0.86
UBE2F-214ENST00000440223 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
UBE2F-214ENST00000440223 BCAR3O75815 825 aa20.45■□□□□ 0.86
UBE2F-214ENST00000440223 MS4A1P11836 297 aa20.45■□□□□ 0.86
UBE2F-214ENST00000440223 TSPYL6Q8N831 410 aa20.45■□□□□ 0.86
UBE2F-214ENST00000440223 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
UBE2F-214ENST00000440223 AFDNP55196 1824 aaKnown RBP20.45■□□□□ 0.86
UBE2F-214ENST00000440223 IPO8O15397 1037 aaKnown RBP20.44■□□□□ 0.86
UBE2F-214ENST00000440223 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
UBE2F-214ENST00000440223 TM4SF1P30408 202 aa20.44■□□□□ 0.86
UBE2F-214ENST00000440223 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
UBE2F-214ENST00000440223 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
UBE2F-214ENST00000440223 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
UBE2F-214ENST00000440223 NRXN2Q9P2S2 1712 aa20.44■□□□□ 0.86
UBE2F-214ENST00000440223 POLRMTO00411 1230 aaKnown RBP20.43■□□□□ 0.86
UBE2F-214ENST00000440223 CAMTA2O94983 1202 aa20.43■□□□□ 0.86
UBE2F-214ENST00000440223 DDR1Q08345 913 aa20.43■□□□□ 0.86
UBE2F-214ENST00000440223 NFIXQ14938 502 aa20.43■□□□□ 0.86
UBE2F-214ENST00000440223 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
UBE2F-214ENST00000440223 STK31Q9BXU1 1019 aa20.43■□□□□ 0.86
UBE2F-214ENST00000440223 RGL2O15211 777 aa20.42■□□□□ 0.86
UBE2F-214ENST00000440223 MYL6BP14649 208 aa20.42■□□□□ 0.86
UBE2F-214ENST00000440223 CCDC30Q5VVM6 783 aa20.42■□□□□ 0.86
UBE2F-214ENST00000440223 FRAT1Q92837 279 aaPredicted RBP20.42■□□□□ 0.86
UBE2F-214ENST00000440223 BRPF1P55201 1214 aaPredicted RBP20.41■□□□□ 0.86
UBE2F-214ENST00000440223 IRX6P78412 446 aaPredicted RBP20.41■□□□□ 0.86
UBE2F-214ENST00000440223 KRT24Q2M2I5 525 aa20.41■□□□□ 0.86
UBE2F-214ENST00000440223 ZKSCAN2Q63HK3 967 aa20.41■□□□□ 0.86
UBE2F-214ENST00000440223 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
UBE2F-214ENST00000440223 CARMIL3Q8ND23 1372 aa20.41■□□□□ 0.86
UBE2F-214ENST00000440223 KIAA1551Q9HCM1 1747 aa20.41■□□□□ 0.86
UBE2F-214ENST00000440223 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
UBE2F-214ENST00000440223 CLEC4GQ6UXB4 293 aa20.4■□□□□ 0.86
UBE2F-214ENST00000440223 BICDL1Q6ZP65 573 aa20.4■□□□□ 0.86
UBE2F-214ENST00000440223 NUP98P52948 1817 aa20.39■□□□□ 0.86
UBE2F-214ENST00000440223 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
UBE2F-214ENST00000440223 PLIN1O60240 522 aa20.39■□□□□ 0.85
UBE2F-214ENST00000440223 PDE3AQ14432 1141 aa20.39■□□□□ 0.85
UBE2F-214ENST00000440223 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
UBE2F-214ENST00000440223 PXDNLA1KZ92 1463 aa20.38■□□□□ 0.85
UBE2F-214ENST00000440223 SERPINB2P05120 415 aa20.38■□□□□ 0.85
UBE2F-214ENST00000440223 TGFB2P61812 414 aa20.38■□□□□ 0.85
UBE2F-214ENST00000440223 MRPL50Q8N5N7 158 aaKnown RBP20.38■□□□□ 0.85
UBE2F-214ENST00000440223 NECTIN2Q92692 538 aa20.38■□□□□ 0.85
UBE2F-214ENST00000440223 SETDB2Q96T68 719 aa20.38■□□□□ 0.85
UBE2F-214ENST00000440223 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
UBE2F-214ENST00000440223 ERVV-1B6SEH8 477 aa20.37■□□□□ 0.85
UBE2F-214ENST00000440223 GPR162Q16538 588 aa20.37■□□□□ 0.85
UBE2F-214ENST00000440223 FTSJ3Q8IY81 847 aaKnown RBP20.37■□□□□ 0.85
UBE2F-214ENST00000440223 PELP1Q8IZL8 1130 aaKnown RBP20.37■□□□□ 0.85
UBE2F-214ENST00000440223 DDX21Q9NR30 783 aaKnown RBP eCLIP20.37■□□□□ 0.85
UBE2F-214ENST00000440223 PDIA6Q15084 440 aa20.36■□□□□ 0.85
UBE2F-214ENST00000440223 NPHP1O15259 732 aa20.35■□□□□ 0.85
UBE2F-214ENST00000440223 TTLL7Q6ZT98 887 aa20.35■□□□□ 0.85
UBE2F-214ENST00000440223 ARHGAP45Q92619 1136 aa20.35■□□□□ 0.85
UBE2F-214ENST00000440223 API5Q9BZZ5 524 aaKnown RBP20.35■□□□□ 0.85
UBE2F-214ENST00000440223 DBF4Q9UBU7 674 aaPredicted RBP20.35■□□□□ 0.85
UBE2F-214ENST00000440223 NOB1Q9ULX3 412 aaKnown RBP20.35■□□□□ 0.85
UBE2F-214ENST00000440223 BRCA1P38398 1863 aaKnown RBP20.35■□□□□ 0.85
UBE2F-214ENST00000440223 PROSER3Q2NL68 480 aa20.34■□□□□ 0.85
UBE2F-214ENST00000440223 ATF7IPQ6VMQ6 1270 aa20.34■□□□□ 0.85
UBE2F-214ENST00000440223 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
UBE2F-214ENST00000440223 ATP10DQ9P241 1426 aa20.34■□□□□ 0.85
UBE2F-214ENST00000440223 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
UBE2F-214ENST00000440223 PTPRCP08575 1304 aa20.33■□□□□ 0.85
UBE2F-214ENST00000440223 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.85
UBE2F-214ENST00000440223 ANXA1P04083 346 aa20.33■□□□□ 0.85
UBE2F-214ENST00000440223 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.85
UBE2F-214ENST00000440223 DZIP1LQ8IYY4 767 aaKnown RBP20.33■□□□□ 0.85
UBE2F-214ENST00000440223 CNBD1Q8NA66 436 aa20.33■□□□□ 0.85
UBE2F-214ENST00000440223 ZBTB3Q9H5J0 574 aa20.33■□□□□ 0.85
UBE2F-214ENST00000440223 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.85
UBE2F-214ENST00000440223 DLEC1Q9Y238 1755 aa20.33■□□□□ 0.84
UBE2F-214ENST00000440223 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
UBE2F-214ENST00000440223 HLFQ16534 295 aa20.32■□□□□ 0.84
UBE2F-214ENST00000440223 ANKRD31Q8N7Z5 1873 aa20.32■□□□□ 0.84
UBE2F-214ENST00000440223 CHD4Q14839 1912 aa20.31■□□□□ 0.84
UBE2F-214ENST00000440223 ST5P78524 1137 aa20.31■□□□□ 0.84
UBE2F-214ENST00000440223 NBPF5PQ86XG9 351 aaPredicted RBP20.31■□□□□ 0.84
UBE2F-214ENST00000440223 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
UBE2F-214ENST00000440223 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
UBE2F-214ENST00000440223 GRIN3BO60391 1043 aa20.3■□□□□ 0.84
UBE2F-214ENST00000440223 DPEP1P16444 411 aa20.3■□□□□ 0.84
UBE2F-214ENST00000440223 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
UBE2F-214ENST00000440223 PRR5LQ6MZQ0 368 aa20.3■□□□□ 0.84
UBE2F-214ENST00000440223 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
UBE2F-214ENST00000440223 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
UBE2F-214ENST00000440223 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
UBE2F-214ENST00000440223 CRBNQ96SW2 442 aa20.3■□□□□ 0.84
UBE2F-214ENST00000440223 TRIM27P14373 513 aa20.29■□□□□ 0.84
UBE2F-214ENST00000440223 PPP4R2Q9NY27 417 aa20.29■□□□□ 0.84
UBE2F-214ENST00000440223 ARFGEF1Q9Y6D6 1849 aa20.28■□□□□ 0.84
UBE2F-214ENST00000440223 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.842e-7■□□□□ 11.3
UBE2F-214ENST00000440223 HSP90AB3PQ58FF7 597 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms