RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 DDX17Q92841 729 aaKnown RBP18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 SURF6O75683 361 aaKnown RBP18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 SYT1P21579 422 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 TAF7Q15545 349 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 KIF1BPQ96EK5 621 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 USP25Q9UHP3 1055 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 CNTROBQ8N137 903 aa18.33■□□□□ 0.53
CDC42EP4-202ENST00000439510 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
CDC42EP4-202ENST00000439510 RASEFQ8IZ41 740 aa18.33■□□□□ 0.52
CDC42EP4-202ENST00000439510 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
CDC42EP4-202ENST00000439510 ATP6V1DQ9Y5K8 247 aa18.33■□□□□ 0.52
CDC42EP4-202ENST00000439510 F13A1P00488 732 aa18.32■□□□□ 0.52
CDC42EP4-202ENST00000439510 ADCY5O95622 1261 aa18.32■□□□□ 0.52
CDC42EP4-202ENST00000439510 MAP4K4O95819 1239 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP4-202ENST00000439510 PRIMPOLQ96LW4 560 aa18.32■□□□□ 0.52
CDC42EP4-202ENST00000439510 FUCA2Q9BTY2 467 aa18.32■□□□□ 0.52
CDC42EP4-202ENST00000439510 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
CDC42EP4-202ENST00000439510 HCLS1P14317 486 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP4-202ENST00000439510 PSME1Q06323 249 aa18.31■□□□□ 0.52
CDC42EP4-202ENST00000439510 PHAXQ9H814 394 aaKnown RBP18.31■□□□□ 0.52
CDC42EP4-202ENST00000439510 NOLC1Q14978 699 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDC42EP4-202ENST00000439510 SPTLC3Q9NUV7 552 aa18.3■□□□□ 0.52
CDC42EP4-202ENST00000439510 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
CDC42EP4-202ENST00000439510 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP4-202ENST00000439510 SRGAP3O43295 1099 aa18.3■□□□□ 0.52
CDC42EP4-202ENST00000439510 KDM4AO75164 1064 aa18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 TTC41PQ6P2S7 1318 aa18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 HOXC9P31274 260 aa18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 GTF2F1P35269 517 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 C1orf167Q5SNV9 1468 aa18.29■□□□□ 0.52
CDC42EP4-202ENST00000439510 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
CDC42EP4-202ENST00000439510 ABTB2Q8N961 1025 aa18.28■□□□□ 0.52
CDC42EP4-202ENST00000439510 NLRP6P59044 892 aa18.28■□□□□ 0.52
CDC42EP4-202ENST00000439510 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
CDC42EP4-202ENST00000439510 KCNB2Q92953 911 aa18.28■□□□□ 0.52
CDC42EP4-202ENST00000439510 ZNF830Q96NB3 372 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP4-202ENST00000439510 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
CDC42EP4-202ENST00000439510 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.52
CDC42EP4-202ENST00000439510 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.52
CDC42EP4-202ENST00000439510 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
CDC42EP4-202ENST00000439510 TM6SF1Q9BZW5 370 aa18.27■□□□□ 0.52
CDC42EP4-202ENST00000439510 TTC12Q9H892 705 aaPredicted RBP18.27■□□□□ 0.52
CDC42EP4-202ENST00000439510 FIBPO43427 364 aa18.27■□□□□ 0.51
CDC42EP4-202ENST00000439510 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.51
CDC42EP4-202ENST00000439510 LARGE1O95461 756 aa18.27■□□□□ 0.51
CDC42EP4-202ENST00000439510 NBPF7P0C2Y1 421 aaPredicted RBP18.27■□□□□ 0.51
CDC42EP4-202ENST00000439510 SPG7Q9UQ90 795 aa18.27■□□□□ 0.51
CDC42EP4-202ENST00000439510 MTMR6Q9Y217 621 aa18.27■□□□□ 0.51
CDC42EP4-202ENST00000439510 MST1RQ04912 1400 aa18.26■□□□□ 0.51
CDC42EP4-202ENST00000439510 DNTTIP2Q5QJE6 756 aaKnown RBP18.26■□□□□ 0.51
CDC42EP4-202ENST00000439510 BEND3Q5T5X7 828 aa18.26■□□□□ 0.51
CDC42EP4-202ENST00000439510 ZSCAN31Q96LW9 406 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP4-202ENST00000439510 SH2B1Q9NRF2 756 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP4-202ENST00000439510 HOXB7P09629 217 aa18.26■□□□□ 0.51
CDC42EP4-202ENST00000439510 LARP6Q9BRS8 491 aaKnown RBP18.26■□□□□ 0.51
CDC42EP4-202ENST00000439510 GJB2P29033 226 aa18.25■□□□□ 0.51
CDC42EP4-202ENST00000439510 RUFY2Q8WXA3 655 aa18.25■□□□□ 0.51
CDC42EP4-202ENST00000439510 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
CDC42EP4-202ENST00000439510 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
CDC42EP4-202ENST00000439510 MTX1Q13505 466 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 MPNDQ8N594 471 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 CPA1P15085 419 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 DNM1Q05193 864 aaKnown RBP18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 GIMAP6Q6P9H5 292 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 DNAAF4Q8WXU2 420 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 DIAPH3Q9NSV4 1193 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 CCDC83Q8IWF9 413 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 PDRG1Q9NUG6 133 aa18.24■□□□□ 0.51
CDC42EP4-202ENST00000439510 PTH1RQ03431 593 aa18.23■□□□□ 0.51
CDC42EP4-202ENST00000439510 EIF4A1P60842 406 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-202ENST00000439510 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
CDC42EP4-202ENST00000439510 ST3GAL1Q11201 340 aa18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 CCDC94Q9BW85 323 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 CYP46A1Q9Y6A2 500 aa18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 LTN1O94822 1766 aa18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 AP5Z1O43299 807 aa18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 TPM3P06753 285 aa18.22■□□□□ 0.51
CDC42EP4-202ENST00000439510 ZBTB7CA1YPR0 619 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 C17orf53Q8N3J3 647 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 NECTIN1Q15223 517 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 KRT28Q7Z3Y7 464 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 ZNF710Q8N1W2 664 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 KIAA1524Q8TCG1 905 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 ADCY9O60503 1353 aa18.21■□□□□ 0.51
CDC42EP4-202ENST00000439510 PRPF40BQ6NWY9 871 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-202ENST00000439510 CLASRPQ8N2M8 674 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-202ENST00000439510 LMO7Q8WWI1 1683 aa18.2■□□□□ 0.5
CDC42EP4-202ENST00000439510 PRDM4Q9UKN5 801 aa18.2■□□□□ 0.5
CDC42EP4-202ENST00000439510 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms