RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 TMEM88BA6NKF7 163 aa6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 H7C1W4 665 aa6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 PRMT3O60678 531 aa6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 CSB-PGBD3P0DP91 1061 aa6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 KRT76Q01546 638 aa6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 CLP1Q92989 425 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 GTPBP3Q969Y2 492 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 SCARF2Q96GP6 870 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-204ENST00000438419 A0A1W2PNR3 127 aa6.98□□□□□ -1.29
TRAPPC13-204ENST00000438419 CARNS1A5YM72 827 aa6.98□□□□□ -1.29
TRAPPC13-204ENST00000438419 TATP17735 454 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-204ENST00000438419 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
TRAPPC13-204ENST00000438419 ZNF385CQ66K41 422 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-204ENST00000438419 PHACTR1Q9C0D0 580 aa6.98□□□□□ -1.29
TRAPPC13-204ENST00000438419 GPR25O00155 361 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 PDE4CQ08493 712 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 FKBP5Q13451 457 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 GAS6Q14393 721 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 LBRQ14739 615 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 ARSJQ5FYB0 599 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 C1orf53Q5VUE5 145 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 ALDH16A1Q8IZ83 802 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 PGBD3Q8N328 593 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 GALNT6Q8NCL4 622 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 COL25A1Q9BXS0 654 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 USTQ9Y2C2 406 aa6.97□□□□□ -1.29
TRAPPC13-204ENST00000438419 K7ELQ4 463 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC13-204ENST00000438419 FOXO3O43524 673 aa6.96□□□□□ -1.3
TRAPPC13-204ENST00000438419 ZCCHC2Q9C0B9 1178 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-204ENST00000438419 NDFIP2Q9NV92 336 aa6.96□□□□□ -1.3
TRAPPC13-204ENST00000438419 HCN2Q9UL51 889 aa6.96□□□□□ -1.3
TRAPPC13-204ENST00000438419 CHMP3Q9Y3E7 222 aa6.96□□□□□ -1.3
TRAPPC13-204ENST00000438419 EFHC2Q5JST6 749 aa6.95□□□□□ -1.3
TRAPPC13-204ENST00000438419 NLRP8Q86W28 1048 aa6.95□□□□□ -1.3
TRAPPC13-204ENST00000438419 RETREG2Q8NC44 543 aa6.95□□□□□ -1.3
TRAPPC13-204ENST00000438419 NGLY1Q96IV0 654 aa6.95□□□□□ -1.3
TRAPPC13-204ENST00000438419 CXXC1Q9P0U4 656 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC13-204ENST00000438419 BNIP3LO60238 219 aa6.94□□□□□ -1.3
TRAPPC13-204ENST00000438419 PLA2G4EQ3MJ16 856 aa6.94□□□□□ -1.3
TRAPPC13-204ENST00000438419 BICDL1Q6ZP65 573 aa6.94□□□□□ -1.3
TRAPPC13-204ENST00000438419 CAPN12Q6ZSI9 719 aa6.94□□□□□ -1.3
TRAPPC13-204ENST00000438419 LRRC69Q6ZNQ3 347 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 ZNF280CQ8ND82 737 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 RHPN1Q8TCX5 695 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 CFHR5Q9BXR6 569 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 QTRT2Q9H974 415 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 GPC6Q9Y625 555 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 ATP2B4P23634 1241 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 FOXR1Q6PIV2 292 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 HOMEZQ8IX15 550 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 ABHD17AQ96GS6 310 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 HSH2DQ96JZ2 352 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 BCS1LQ9Y276 419 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 PCDHGC4Q9Y5F7 938 aa6.93□□□□□ -1.3
TRAPPC13-204ENST00000438419 ATXN7O15265 892 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 SSFA2P28290 1259 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 SCNN1AP37088 669 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 TNP2Q05952 138 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 RTN1Q16799 776 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 SAMD5Q5TGI4 173 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 SUSD3Q96L08 255 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 TRERF1Q96PN7 1200 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 LRFN2Q9ULH4 789 aa6.92□□□□□ -1.3
TRAPPC13-204ENST00000438419 ARHGEF15O94989 841 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 PHLDB3Q6NSJ2 640 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 FIGNL1Q6PIW4 674 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 MYO19Q96H55 970 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 MKNK1Q9BUB5 465 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 SAP130Q9H0E3 1048 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 KLK14Q9P0G3 267 aa6.91□□□□□ -1.3
TRAPPC13-204ENST00000438419 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 EFSO43281 561 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 FAM157BP0CG42 384 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 MAPTP10636 758 aaKnown RBP6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 COX20Q5RI15 118 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 WHAMMQ8TF30 809 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 COL26A1Q96A83 441 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 VTI1AQ96AJ9 217 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 KRTAP9-4Q9BYQ2 154 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 STRN4Q9NRL3 753 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 DMGDHQ9UI17 866 aaKnown RBP6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 ATXN7L1Q9ULK2 861 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.31
TRAPPC13-204ENST00000438419 C2CD2LO14523 706 aa6.89□□□□□ -1.31
TRAPPC13-204ENST00000438419 CTBSQ01459 385 aa6.89□□□□□ -1.31
TRAPPC13-204ENST00000438419 B4GALNT3Q6L9W6 998 aa6.89□□□□□ -1.31
TRAPPC13-204ENST00000438419 MBIPQ9NS73 344 aa6.89□□□□□ -1.31
TRAPPC13-204ENST00000438419 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
TRAPPC13-204ENST00000438419 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 SLURP2P0DP57 97 aa6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 FGFR3P22607 806 aa6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 DGKZQ13574 1117 aa6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 NAA30Q147X3 362 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 NEUROD4Q9HD90 331 aa6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 ANKIB1Q9P2G1 1089 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms