RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RPLP1P05386 114 aaKnown RBP7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 EAPPQ56P03 285 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 COX20Q5RI15 118 aa7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 ALDH16A1Q8IZ83 802 aa7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 GIPC2Q8TF65 315 aa7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 RBCK1Q9BYM8 510 aa7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 NEUROD4Q9HD90 331 aa7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 IQSEC3Q9UPP2 1182 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P45-201ENST00000435986 EML1O00423 815 aa7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 TERTO14746 1132 aaKnown RBP7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 TATP17735 454 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 EIF1AXP47813 144 aaKnown RBP7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 FHDC1Q9C0D6 1143 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 POLMQ9NP87 494 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 DNMT3LQ9UJW3 386 aa7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 GPC6Q9Y625 555 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P45-201ENST00000435986 NEFLP07196 543 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 RNF144AP50876 292 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 POTEAQ6S8J7 498 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 NPAS4Q8IUM7 802 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 ZNF428Q96B54 188 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 SAP130Q9H0E3 1048 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 QTRT2Q9H974 415 aaKnown RBP7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
HMGB1P45-201ENST00000435986 TTLL8A6PVC2 850 aa7.38□□□□□ -1.23
HMGB1P45-201ENST00000435986 ZNF16P17020 682 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P45-201ENST00000435986 ATP2B2Q01814 1243 aa7.38□□□□□ -1.23
HMGB1P45-201ENST00000435986 PLCB3Q01970 1234 aa7.38□□□□□ -1.23
HMGB1P45-201ENST00000435986 EHHADHQ08426 723 aa7.38□□□□□ -1.23
HMGB1P45-201ENST00000435986 IFT43Q96FT9 208 aa7.38□□□□□ -1.23
HMGB1P45-201ENST00000435986 NXF1Q9UBU9 619 aaKnown RBP7.38□□□□□ -1.23
HMGB1P45-201ENST00000435986 MAN1A2O60476 641 aa7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 CTSOP43234 321 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 PLA2G4AP47712 749 aa7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 DGKZQ13574 1117 aa7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 RHPN1Q8TCX5 695 aa7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 MRRFQ96E11 262 aaKnown RBP7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 INSM2Q96T92 566 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 GRIP2Q9C0E4 1043 aa7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 ZDHHC3Q9NYG2 299 aa7.37□□□□□ -1.23
HMGB1P45-201ENST00000435986 MZF1P28698 734 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P45-201ENST00000435986 ECM1Q16610 540 aa7.36□□□□□ -1.23
HMGB1P45-201ENST00000435986 WDR44Q5JSH3 913 aa7.36□□□□□ -1.23
HMGB1P45-201ENST00000435986 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
HMGB1P45-201ENST00000435986 NPAS3Q8IXF0 933 aa7.36□□□□□ -1.23
HMGB1P45-201ENST00000435986 PARP3Q9Y6F1 533 aa7.36□□□□□ -1.23
HMGB1P45-201ENST00000435986 SPATA31C2B4DYI2 1134 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 H3BM21 787 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 TNFRSF10BO14763 440 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 TMC7Q7Z402 723 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 RNF217Q8TC41 542 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 ZDHHC1Q8WTX9 485 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 LRFN2Q9ULH4 789 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 USP3Q9Y6I4 520 aa7.35□□□□□ -1.23
HMGB1P45-201ENST00000435986 ERBB4Q15303 1308 aa7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 ZAP70P43403 619 aa7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 NBPF10Q6P3W6 841 aaKnown RBP7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 LYSMD3Q7Z3D4 306 aa7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 PIK3R5Q8WYR1 880 aa7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 FNDC3AQ9Y2H6 1198 aaKnown RBP7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 GJA3Q9Y6H8 435 aa7.34□□□□□ -1.23
HMGB1P45-201ENST00000435986 FIGNL2A6NMB9 653 aa7.33□□□□□ -1.24
HMGB1P45-201ENST00000435986 TREHO43280 583 aa7.33□□□□□ -1.24
HMGB1P45-201ENST00000435986 FZD6O60353 706 aa7.33□□□□□ -1.24
HMGB1P45-201ENST00000435986 C4orf17Q53FE4 359 aa7.33□□□□□ -1.24
HMGB1P45-201ENST00000435986 KLK14Q9P0G3 267 aa7.33□□□□□ -1.24
HMGB1P45-201ENST00000435986 A0A1B0GTH6 734 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 TGFBR3LH3BV60 316 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 EPB42P16452 691 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 MAPK8P45983 427 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 EDEM1Q92611 657 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 ALKBH8Q96BT7 664 aaKnown RBP7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 CCDC87Q9NVE4 849 aa7.32□□□□□ -1.24
HMGB1P45-201ENST00000435986 WIPF1O43516 503 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 MICAL2O94851 1124 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 VAMP1P23763 118 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 TXLNAP40222 546 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 PHKA2P46019 1235 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 PTSQ03393 145 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 ARSJQ5FYB0 599 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 SH3PXD2AQ5TCZ1 1133 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 IER5Q5VY09 327 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 ALG1LQ6GMV1 187 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 PRICKLE2Q7Z3G6 844 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 FBXO33Q7Z6M2 555 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 PGBD3Q8N328 593 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 FAM129BQ96TA1 746 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 POLIQ9UNA4 740 aa7.31□□□□□ -1.24
HMGB1P45-201ENST00000435986 UNCXA6NJT0 531 aa7.3□□□□□ -1.24
HMGB1P45-201ENST00000435986 PDGFAP04085 211 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms