RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 C9orf131Q5VYM1 1079 aa20.77■□□□□ 0.92
NUP50-210ENST00000434760 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
NUP50-210ENST00000434760 PRELPP51888 382 aa20.76■□□□□ 0.91
NUP50-210ENST00000434760 CCDC146Q8IYE0 955 aa20.76■□□□□ 0.91
NUP50-210ENST00000434760 TTLL6Q8N841 843 aa20.76■□□□□ 0.91
NUP50-210ENST00000434760 ZNF652Q9Y2D9 606 aa20.76■□□□□ 0.91
NUP50-210ENST00000434760 H0YIN7 160 aa20.75■□□□□ 0.91
NUP50-210ENST00000434760 RRP7AQ9Y3A4 280 aaKnown RBP20.75■□□□□ 0.91
NUP50-210ENST00000434760 SENP3-EIF4A1A0A087X0R7 540 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 NFKBIEO00221 500 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 PDE6BP35913 854 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 LMOD3Q0VAK6 560 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 HLFQ16534 295 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 LRP10Q7Z4F1 713 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 TSPYL4Q9UJ04 414 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 PDZRN3Q9UPQ7 1066 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 ERBB4Q15303 1308 aa20.74■□□□□ 0.91
NUP50-210ENST00000434760 ABCC12Q96J65 1359 aa20.73■□□□□ 0.91
NUP50-210ENST00000434760 RIC1Q4ADV7 1423 aa20.73■□□□□ 0.91
NUP50-210ENST00000434760 BABAM1Q9NWV8 329 aa20.73■□□□□ 0.91
NUP50-210ENST00000434760 RNF181Q9P0P0 153 aa20.73■□□□□ 0.91
NUP50-210ENST00000434760 TRIM35Q9UPQ4 493 aa20.73■□□□□ 0.91
NUP50-210ENST00000434760 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
NUP50-210ENST00000434760 LAMB2P55268 1798 aa20.72■□□□□ 0.91
NUP50-210ENST00000434760 ST5P78524 1137 aa20.72■□□□□ 0.91
NUP50-210ENST00000434760 NBPF5PQ86XG9 351 aaPredicted RBP20.72■□□□□ 0.91
NUP50-210ENST00000434760 RUNDC1Q96C34 613 aa20.72■□□□□ 0.91
NUP50-210ENST00000434760 ADAMTS8Q9UP79 889 aa20.72■□□□□ 0.91
NUP50-210ENST00000434760 MAP3K15Q6ZN16 1313 aa20.72■□□□□ 0.91
NUP50-210ENST00000434760 SRGNP10124 158 aa20.71■□□□□ 0.91
NUP50-210ENST00000434760 WDR43Q15061 677 aaKnown RBP eCLIP20.71■□□□□ 0.91
NUP50-210ENST00000434760 TTLL7Q6ZT98 887 aa20.71■□□□□ 0.91
NUP50-210ENST00000434760 NIP7Q9Y221 180 aaKnown RBP eCLIP20.71■□□□□ 0.91
NUP50-210ENST00000434760 ZC3H4Q9UPT8 1303 aaKnown RBP20.71■□□□□ 0.91
NUP50-210ENST00000434760 NMRK2Q9NPI5 230 aa20.7■□□□□ 0.9
NUP50-210ENST00000434760 UBN2Q6ZU65 1347 aa20.7■□□□□ 0.9
NUP50-210ENST00000434760 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
NUP50-210ENST00000434760 ERVV-1B6SEH8 477 aa20.69■□□□□ 0.9
NUP50-210ENST00000434760 PDIA6Q15084 440 aa20.69■□□□□ 0.9
NUP50-210ENST00000434760 STYK1Q6J9G0 422 aa20.69■□□□□ 0.9
NUP50-210ENST00000434760 ZNF622Q969S3 477 aaKnown RBP eCLIP20.69■□□□□ 0.9
NUP50-210ENST00000434760 SNED1Q8TER0 1413 aa20.69■□□□□ 0.9
NUP50-210ENST00000434760 WDR90Q96KV7 1748 aa20.68■□□□□ 0.9
NUP50-210ENST00000434760 MYL6BP14649 208 aa20.68■□□□□ 0.9
NUP50-210ENST00000434760 LMNB1P20700 586 aa20.68■□□□□ 0.9
NUP50-210ENST00000434760 PROSER3Q2NL68 480 aa20.68■□□□□ 0.9
NUP50-210ENST00000434760 CHL1O00533 1208 aa20.67■□□□□ 0.9
NUP50-210ENST00000434760 NPHP1O15259 732 aa20.67■□□□□ 0.9
NUP50-210ENST00000434760 NEUROD2Q15784 382 aa20.67■□□□□ 0.9
NUP50-210ENST00000434760 PRPF40BQ6NWY9 871 aaKnown RBP20.67■□□□□ 0.9
NUP50-210ENST00000434760 NGEFQ8N5V2 710 aa20.67■□□□□ 0.9
NUP50-210ENST00000434760 LTBP3Q9NS15 1303 aa20.67■□□□□ 0.9
NUP50-210ENST00000434760 C21orf2O43822 256 aa20.66■□□□□ 0.9
NUP50-210ENST00000434760 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
NUP50-210ENST00000434760 KIF6Q6ZMV9 814 aa20.66■□□□□ 0.9
NUP50-210ENST00000434760 MASTLQ96GX5 879 aa20.66■□□□□ 0.9
NUP50-210ENST00000434760 ZBTB3Q9H5J0 574 aa20.66■□□□□ 0.9
NUP50-210ENST00000434760 CNKSR1Q969H4 720 aa20.65■□□□□ 0.9
NUP50-210ENST00000434760 TPTE2Q6XPS3 522 aa20.64■□□□□ 0.89
NUP50-210ENST00000434760 C7orf43Q8WVR3 580 aa20.64■□□□□ 0.89
NUP50-210ENST00000434760 DDX60Q8IY21 1712 aaKnown RBP20.64■□□□□ 0.89
NUP50-210ENST00000434760 KDM2BQ8NHM5 1336 aa20.63■□□□□ 0.89
NUP50-210ENST00000434760 FAM177BA6PVY3 158 aa20.63■□□□□ 0.89
NUP50-210ENST00000434760 ANXA1P04083 346 aa20.63■□□□□ 0.89
NUP50-210ENST00000434760 CRY2Q49AN0 593 aa20.63■□□□□ 0.89
NUP50-210ENST00000434760 ZNF34Q8IZ26 560 aa20.63■□□□□ 0.89
NUP50-210ENST00000434760 NTSR2O95665 410 aa20.62■□□□□ 0.89
NUP50-210ENST00000434760 NPR1P16066 1061 aa20.62■□□□□ 0.89
NUP50-210ENST00000434760 HSPA6P17066 643 aa20.62■□□□□ 0.89
NUP50-210ENST00000434760 GIGYF2Q6Y7W6 1299 aaKnown RBP20.62■□□□□ 0.89
NUP50-210ENST00000434760 ZNF219Q9P2Y4 722 aaPredicted RBP20.62■□□□□ 0.89
NUP50-210ENST00000434760 TOMM70O94826 608 aa20.61■□□□□ 0.89
NUP50-210ENST00000434760 EIF2S2P20042 333 aaKnown RBP20.61■□□□□ 0.89
NUP50-210ENST00000434760 GPTP24298 496 aa20.61■□□□□ 0.89
NUP50-210ENST00000434760 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
NUP50-210ENST00000434760 NUTM1Q86Y26 1132 aa20.61■□□□□ 0.89
NUP50-210ENST00000434760 NYXQ9GZU5 481 aa20.61■□□□□ 0.89
NUP50-210ENST00000434760 TAOK3Q9H2K8 898 aa20.61■□□□□ 0.89
NUP50-210ENST00000434760 ERFEQ4G0M1 354 aa20.6■□□□□ 0.89
NUP50-210ENST00000434760 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
NUP50-210ENST00000434760 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
NUP50-210ENST00000434760 SOGA3Q5TF21 947 aa20.59■□□□□ 0.89
NUP50-210ENST00000434760 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
NUP50-210ENST00000434760 GLTPD2A6NH11 291 aa20.58■□□□□ 0.89
NUP50-210ENST00000434760 APAF1O14727 1248 aa20.58■□□□□ 0.89
NUP50-210ENST00000434760 HOXB7P09629 217 aa20.58■□□□□ 0.89
NUP50-210ENST00000434760 NECTIN2Q92692 538 aa20.58■□□□□ 0.89
NUP50-210ENST00000434760 CFAP44Q96MT7 982 aa20.58■□□□□ 0.89
NUP50-210ENST00000434760 MBIPQ9NS73 344 aa20.58■□□□□ 0.89
NUP50-210ENST00000434760 LRRC37AA6NMS7 1700 aa20.58■□□□□ 0.88
NUP50-210ENST00000434760 COL4A5P29400 1685 aa20.58■□□□□ 0.88
NUP50-210ENST00000434760 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
NUP50-210ENST00000434760 OLFM4Q6UX06 510 aa20.57■□□□□ 0.88
NUP50-210ENST00000434760 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
NUP50-210ENST00000434760 DDX21Q9NR30 783 aaKnown RBP eCLIP20.57■□□□□ 0.88
NUP50-210ENST00000434760 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
NUP50-210ENST00000434760 TAF1P21675 1872 aa20.56■□□□□ 0.88
NUP50-210ENST00000434760 SCN4AP35499 1836 aa20.56■□□□□ 0.88
NUP50-210ENST00000434760 C3orf67Q6ZVT6 689 aa20.56■□□□□ 0.88
NUP50-210ENST00000434760 XAGE3Q8WTP9 111 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms