RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 FAM13AO94988 1023 aa11.11□□□□□ -0.63
PTPRK-212ENST00000434424 IGFBP4P22692 258 aa11.11□□□□□ -0.63
PTPRK-212ENST00000434424 GPC1P35052 558 aa11.11□□□□□ -0.63
PTPRK-212ENST00000434424 ZC3H6P61129 1189 aaKnown RBP11.11□□□□□ -0.63
PTPRK-212ENST00000434424 NAA30Q147X3 362 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-212ENST00000434424 ZNF358Q9NW07 568 aa11.11□□□□□ -0.63
PTPRK-212ENST00000434424 TSNAXIP1Q2TAA8 658 aa11.1□□□□□ -0.63
PTPRK-212ENST00000434424 SREK1Q8WXA9 508 aaKnown RBP11.1□□□□□ -0.63
PTPRK-212ENST00000434424 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
PTPRK-212ENST00000434424 SCTRP47872 440 aa11.09□□□□□ -0.63
PTPRK-212ENST00000434424 POU4F2Q12837 409 aa11.09□□□□□ -0.63
PTPRK-212ENST00000434424 CC2D2BQ6DHV5 1058 aa11.09□□□□□ -0.63
PTPRK-212ENST00000434424 GPAT2Q6NUI2 795 aa11.09□□□□□ -0.63
PTPRK-212ENST00000434424 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
PTPRK-212ENST00000434424 NPR3P17342 541 aa11.08□□□□□ -0.64
PTPRK-212ENST00000434424 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
PTPRK-212ENST00000434424 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
PTPRK-212ENST00000434424 SCARF2Q96GP6 870 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-212ENST00000434424 GMCL1Q96IK5 515 aa11.08□□□□□ -0.64
PTPRK-212ENST00000434424 RBCK1Q9BYM8 510 aa11.08□□□□□ -0.64
PTPRK-212ENST00000434424 MAP3K10Q02779 954 aa11.07□□□□□ -0.64
PTPRK-212ENST00000434424 RIPOR1Q6ZS17 1223 aa11.07□□□□□ -0.64
PTPRK-212ENST00000434424 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
PTPRK-212ENST00000434424 GRIP2Q9C0E4 1043 aa11.07□□□□□ -0.64
PTPRK-212ENST00000434424 DYRK1BQ9Y463 629 aa11.07□□□□□ -0.64
PTPRK-212ENST00000434424 IGF1RP08069 1367 aa11.06□□□□□ -0.64
PTPRK-212ENST00000434424 MYO15BQ96JP2 1530 aa11.06□□□□□ -0.64
PTPRK-212ENST00000434424 BACH1O14867 736 aa11.06□□□□□ -0.64
PTPRK-212ENST00000434424 NDUFB5O43674 189 aa11.06□□□□□ -0.64
PTPRK-212ENST00000434424 SCG3Q8WXD2 468 aaKnown RBP11.06□□□□□ -0.64
PTPRK-212ENST00000434424 CLN3Q13286 438 aa11.05□□□□□ -0.64
PTPRK-212ENST00000434424 NBPF10Q6P3W6 841 aaKnown RBP11.05□□□□□ -0.64
PTPRK-212ENST00000434424 TMC7Q7Z402 723 aa11.05□□□□□ -0.64
PTPRK-212ENST00000434424 NBPF15Q8N660 670 aa11.05□□□□□ -0.64
PTPRK-212ENST00000434424 GTPBP3Q969Y2 492 aaKnown RBP11.05□□□□□ -0.64
PTPRK-212ENST00000434424 OSBPL3Q9H4L5 887 aa11.05□□□□□ -0.64
PTPRK-212ENST00000434424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPRK-212ENST00000434424 TMEM229AB2RXF0 380 aa11.04□□□□□ -0.64
PTPRK-212ENST00000434424 P4HBP07237 508 aaKnown RBP11.04□□□□□ -0.64
PTPRK-212ENST00000434424 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
PTPRK-212ENST00000434424 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
PTPRK-212ENST00000434424 PUS7Q96PZ0 661 aaKnown RBP11.04□□□□□ -0.64
PTPRK-212ENST00000434424 BRPF3Q9ULD4 1205 aa11.04□□□□□ -0.64
PTPRK-212ENST00000434424 CNTNAP5Q8WYK1 1306 aa11.04□□□□□ -0.64
PTPRK-212ENST00000434424 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 MPSTP25325 297 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 NAALADL2Q58DX5 795 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 SLC27A3Q5K4L6 730 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 ACDQ96AP0 544 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 NLRP3Q96P20 1036 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 GAS2L1Q99501 681 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-212ENST00000434424 BACH2Q9BYV9 841 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 BICRAQ9NZM4 1560 aa11.03□□□□□ -0.64
PTPRK-212ENST00000434424 SPATA31C2B4DYI2 1134 aa11.02□□□□□ -0.65
PTPRK-212ENST00000434424 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-212ENST00000434424 FGD1P98174 961 aa11.02□□□□□ -0.65
PTPRK-212ENST00000434424 TNS4Q8IZW8 715 aa11.02□□□□□ -0.65
PTPRK-212ENST00000434424 TMC1Q8TDI8 760 aa11.02□□□□□ -0.65
PTPRK-212ENST00000434424 CITED4Q96RK1 184 aa11.02□□□□□ -0.65
PTPRK-212ENST00000434424 SCAMP3O14828 347 aaKnown RBP11.01□□□□□ -0.65
PTPRK-212ENST00000434424 IGHA1P01876 353 aa11.01□□□□□ -0.65
PTPRK-212ENST00000434424 THBS1P07996 1170 aa11.01□□□□□ -0.65
PTPRK-212ENST00000434424 GDF10P55107 478 aa11.01□□□□□ -0.65
PTPRK-212ENST00000434424 MRPL58Q14197 206 aaKnown RBP11.01□□□□□ -0.65
PTPRK-212ENST00000434424 C16orf46Q6P387 395 aa11.01□□□□□ -0.65
PTPRK-212ENST00000434424 FOXR1Q6PIV2 292 aa11.01□□□□□ -0.65
PTPRK-212ENST00000434424 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
PTPRK-212ENST00000434424 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-212ENST00000434424 ARHGEF10LQ9HCE6 1279 aa11.01□□□□□ -0.65
PTPRK-212ENST00000434424 H7C1W4 665 aa11□□□□□ -0.65
PTPRK-212ENST00000434424 WASLO00401 505 aaPredicted RBP11□□□□□ -0.65
PTPRK-212ENST00000434424 TREHO43280 583 aa11□□□□□ -0.65
PTPRK-212ENST00000434424 ITGB2P05107 769 aa11□□□□□ -0.65
PTPRK-212ENST00000434424 BCRP11274 1271 aa11□□□□□ -0.65
PTPRK-212ENST00000434424 SCNN1DP51172 638 aa11□□□□□ -0.65
PTPRK-212ENST00000434424 FOXK2Q01167 660 aa11□□□□□ -0.65
PTPRK-212ENST00000434424 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
PTPRK-212ENST00000434424 SF3A1Q15459 793 aaKnown RBP11□□□□□ -0.65
PTPRK-212ENST00000434424 ENAMQ9NRM1 1142 aa11□□□□□ -0.65
PTPRK-212ENST00000434424 ITGAEP38570 1179 aa10.99□□□□□ -0.65
PTPRK-212ENST00000434424 FMR1Q06787 632 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPRK-212ENST00000434424 AAMPQ13685 434 aa10.99□□□□□ -0.65
PTPRK-212ENST00000434424 ALKBH2Q6NS38 261 aa10.99□□□□□ -0.65
PTPRK-212ENST00000434424 FAM177A1Q8N128 213 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-212ENST00000434424 TSPAN10Q9H1Z9 355 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-212ENST00000434424 RAB6BQ9NRW1 208 aa10.99□□□□□ -0.65
PTPRK-212ENST00000434424 PLCB3Q01970 1234 aa10.98□□□□□ -0.65
PTPRK-212ENST00000434424 WDR44Q5JSH3 913 aa10.98□□□□□ -0.65
PTPRK-212ENST00000434424 UBXN4Q92575 508 aa10.98□□□□□ -0.65
PTPRK-212ENST00000434424 TIMMDC1Q9NPL8 285 aa10.98□□□□□ -0.65
PTPRK-212ENST00000434424 PPP1R1BQ9UD71 204 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-212ENST00000434424 SERTAD1Q9UHV2 236 aa10.98□□□□□ -0.65
PTPRK-212ENST00000434424 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
PTPRK-212ENST00000434424 PPP1R12BO60237 982 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-212ENST00000434424 INHAP05111 366 aa10.97□□□□□ -0.65
PTPRK-212ENST00000434424 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
PTPRK-212ENST00000434424 DMRTB1Q96MA1 342 aa10.97□□□□□ -0.65
PTPRK-212ENST00000434424 SAP130Q9H0E3 1048 aa10.97□□□□□ -0.65
PTPRK-212ENST00000434424 IL2RAP01589 272 aa10.96□□□□□ -0.65
PTPRK-212ENST00000434424 LDHBP07195 334 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms