RNA–Protein interactions for RNA: ENST00000434266.1

EPHA4-207, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 617 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-207ENST00000434266 EMP3P54852 163 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 CCDC125Q86Z20 511 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 IL17REQ8NFR9 667 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 CCDC102AQ96A19 550 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 DCAF5Q96JK2 942 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 TRPC5Q9UL62 973 aaPredicted RBP9.97□□□□□ -0.81
EPHA4-207ENST00000434266 PCDH11XQ9BZA7 1347 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 PCDH11YQ9BZA8 1340 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 DISP2A7MBM2 1401 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 MEGF6O75095 1541 aa9.97□□□□□ -0.81
EPHA4-207ENST00000434266 SENP3-EIF4A1A0A087X0R7 540 aa9.96□□□□□ -0.82
EPHA4-207ENST00000434266 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.82
EPHA4-207ENST00000434266 CYP27B1O15528 508 aa9.96□□□□□ -0.82
EPHA4-207ENST00000434266 RNMTO43148 476 aaKnown RBP9.96□□□□□ -0.82
EPHA4-207ENST00000434266 ONECUT3O60422 494 aaPredicted RBP9.96□□□□□ -0.82
EPHA4-207ENST00000434266 TAF7Q15545 349 aaPredicted RBP9.96□□□□□ -0.82
EPHA4-207ENST00000434266 USP35Q9P2H5 1018 aa9.96□□□□□ -0.82
EPHA4-207ENST00000434266 ERVV-2B6SEH9 535 aa9.95□□□□□ -0.82
EPHA4-207ENST00000434266 TRIM66O15016 1216 aa9.95□□□□□ -0.82
EPHA4-207ENST00000434266 BRPF1P55201 1214 aaPredicted RBP9.95□□□□□ -0.82
EPHA4-207ENST00000434266 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
EPHA4-207ENST00000434266 MCM10Q7L590 875 aa9.95□□□□□ -0.82
EPHA4-207ENST00000434266 ZNF428Q96B54 188 aa9.95□□□□□ -0.82
EPHA4-207ENST00000434266 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
EPHA4-207ENST00000434266 CCDC9Q9Y3X0 531 aaKnown RBP9.95□□□□□ -0.82
EPHA4-207ENST00000434266 TEFQ10587 303 aa9.94□□□□□ -0.82
EPHA4-207ENST00000434266 DCTN1Q14203 1278 aa9.94□□□□□ -0.82
EPHA4-207ENST00000434266 DDB1Q16531 1140 aa9.94□□□□□ -0.82
EPHA4-207ENST00000434266 FAM163AQ96GL9 167 aaPredicted RBP9.94□□□□□ -0.82
EPHA4-207ENST00000434266 LGR6Q9HBX8 967 aa9.94□□□□□ -0.82
EPHA4-207ENST00000434266 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 PLCH1Q4KWH8 1693 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 ATRNO75882 1429 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 SOS1Q07889 1333 aaPredicted RBP9.93□□□□□ -0.82
EPHA4-207ENST00000434266 COL9A1P20849 921 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 PRSS12P56730 875 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 PADI6Q6TGC4 694 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 MPRIPQ6WCQ1 1025 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 THUMPD2Q9BTF0 503 aaKnown RBP9.93□□□□□ -0.82
EPHA4-207ENST00000434266 CHMP4AQ9BY43 222 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 MBIPQ9NS73 344 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 NRAPQ86VF7 1730 aa9.93□□□□□ -0.82
EPHA4-207ENST00000434266 FANCIQ9NVI1 1328 aa9.92□□□□□ -0.82
EPHA4-207ENST00000434266 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
EPHA4-207ENST00000434266 DDX54Q8TDD1 881 aaKnown RBP9.92□□□□□ -0.82
EPHA4-207ENST00000434266 SLC52A2Q9HAB3 445 aa9.92□□□□□ -0.82
EPHA4-207ENST00000434266 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.91□□□□□ -0.82
EPHA4-207ENST00000434266 KCNK17Q96T54 332 aa9.91□□□□□ -0.82
EPHA4-207ENST00000434266 RCAN3Q9UKA8 241 aa9.91□□□□□ -0.82
EPHA4-207ENST00000434266 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
EPHA4-207ENST00000434266 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.82
EPHA4-207ENST00000434266 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.82
EPHA4-207ENST00000434266 BTBD11A6QL63 1104 aa9.9□□□□□ -0.82
EPHA4-207ENST00000434266 CABP4P57796 275 aa9.9□□□□□ -0.82
EPHA4-207ENST00000434266 EXOSC9Q06265 439 aaKnown RBP9.9□□□□□ -0.82
EPHA4-207ENST00000434266 PDE4DQ08499 809 aa9.9□□□□□ -0.82
EPHA4-207ENST00000434266 AMHR2Q16671 573 aa9.9□□□□□ -0.82
EPHA4-207ENST00000434266 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.82
EPHA4-207ENST00000434266 TSPYL4Q9UJ04 414 aa9.9□□□□□ -0.82
EPHA4-207ENST00000434266 TNS2Q63HR2 1409 aa9.9□□□□□ -0.83
EPHA4-207ENST00000434266 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
EPHA4-207ENST00000434266 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
EPHA4-207ENST00000434266 HOXB7P09629 217 aa9.89□□□□□ -0.83
EPHA4-207ENST00000434266 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
EPHA4-207ENST00000434266 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
EPHA4-207ENST00000434266 TSR2Q969E8 191 aaKnown RBP9.89□□□□□ -0.83
EPHA4-207ENST00000434266 ADAMTS7Q9UKP4 1686 aa9.89□□□□□ -0.83
EPHA4-207ENST00000434266 KDM6AO15550 1401 aaPredicted RBP9.89□□□□□ -0.83
EPHA4-207ENST00000434266 DLG5Q8TDM6 1919 aa9.88□□□□□ -0.83
EPHA4-207ENST00000434266 VAMP4O75379 141 aa9.88□□□□□ -0.83
EPHA4-207ENST00000434266 OATP04181 439 aa9.88□□□□□ -0.83
EPHA4-207ENST00000434266 PBX2P40425 430 aa9.88□□□□□ -0.83
EPHA4-207ENST00000434266 MARCH10Q8NA82 808 aaPredicted RBP9.88□□□□□ -0.83
EPHA4-207ENST00000434266 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
EPHA4-207ENST00000434266 SRCAPQ6ZRS2 3230 aa9.88□□□□□ -0.83
EPHA4-207ENST00000434266 BCL9O00512 1426 aa9.88□□□□□ -0.83
EPHA4-207ENST00000434266 MRC1P22897 1456 aa9.87□□□□□ -0.83
EPHA4-207ENST00000434266 ARHGAP33O14559 1287 aa9.87□□□□□ -0.83
EPHA4-207ENST00000434266 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
EPHA4-207ENST00000434266 EIF4A1P60842 406 aaKnown RBP9.87□□□□□ -0.83
EPHA4-207ENST00000434266 TWISTNBQ3B726 338 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-207ENST00000434266 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-207ENST00000434266 ZNF790Q6PG37 636 aa9.87□□□□□ -0.83
EPHA4-207ENST00000434266 ZNF687Q8N1G0 1237 aa9.87□□□□□ -0.83
EPHA4-207ENST00000434266 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-207ENST00000434266 C8orf58Q8NAV2 365 aa9.87□□□□□ -0.83
EPHA4-207ENST00000434266 MIS18AQ9NYP9 233 aa9.87□□□□□ -0.83
EPHA4-207ENST00000434266 HEG1Q9ULI3 1381 aa9.87□□□□□ -0.83
EPHA4-207ENST00000434266 TRIM6-TRIM34B2RNG4 842 aa9.86□□□□□ -0.83
EPHA4-207ENST00000434266 SEPT12Q8IYM1 358 aa9.86□□□□□ -0.83
EPHA4-207ENST00000434266 TMOD3Q9NYL9 352 aa9.86□□□□□ -0.83
EPHA4-207ENST00000434266 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
EPHA4-207ENST00000434266 SUPT16HQ9Y5B9 1047 aaKnown RBP9.86□□□□□ -0.83
EPHA4-207ENST00000434266 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
EPHA4-207ENST00000434266 PSEN2P49810 448 aa9.85□□□□□ -0.83
EPHA4-207ENST00000434266 METTL3Q86U44 580 aaKnown RBP9.85□□□□□ -0.83
EPHA4-207ENST00000434266 TTC5Q8N0Z6 440 aa9.85□□□□□ -0.83
EPHA4-207ENST00000434266 TSPYL6Q8N831 410 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms