RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MRRFQ96E11 262 aaKnown RBP5.34□□□□□ -1.55
HMGB1P27-201ENST00000431429 DMRTB1Q96MA1 342 aa5.34□□□□□ -1.55
HMGB1P27-201ENST00000431429 CAPN5O15484 640 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 MZF1P28698 734 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 MRPL58Q14197 206 aaKnown RBP5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 TMEM214Q6NUQ4 689 aaKnown RBP5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 ATCAYQ86WG3 371 aa5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 IFT43Q96FT9 208 aa5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 KLK14Q9P0G3 267 aa5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 BRPF3Q9ULD4 1205 aa5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 ZNF232Q9UNY5 417 aa5.33□□□□□ -1.56
HMGB1P27-201ENST00000431429 TGFBR3LH3BV60 316 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 PDGFAP04085 211 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 ZAP70P43403 619 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 PLA2G4AP47712 749 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 GNASQ5JWF2 1037 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 MRPL14Q6P1L8 145 aaKnown RBP5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 CRIPAKQ8N1N5 446 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 NGLY1Q96IV0 654 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 POLIQ9UNA4 740 aa5.32□□□□□ -1.56
HMGB1P27-201ENST00000431429 SOS2Q07890 1332 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 OPLAHO14841 1288 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 RECKO95980 971 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 GRNP28799 593 aaKnown RBP5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 EHHADHQ08426 723 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 PDE3BQ13370 1112 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 EAPPQ56P03 285 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 ZNF326Q5BKZ1 582 aaKnown RBP5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 SLC27A3Q5K4L6 730 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 LDLRAD1Q5T700 205 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 TRIM46Q7Z4K8 759 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 TREML1Q86YW5 311 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 SUSD3Q96L08 255 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 CFHR5Q9BXR6 569 aa5.31□□□□□ -1.56
HMGB1P27-201ENST00000431429 USP5P45974 858 aa5.3□□□□□ -1.56
HMGB1P27-201ENST00000431429 ENOX2Q16206 610 aaKnown RBP5.3□□□□□ -1.56
HMGB1P27-201ENST00000431429 HIF1AQ16665 826 aa5.3□□□□□ -1.56
HMGB1P27-201ENST00000431429 ZNF280CQ8ND82 737 aa5.3□□□□□ -1.56
HMGB1P27-201ENST00000431429 EDEM1Q92611 657 aa5.3□□□□□ -1.56
HMGB1P27-201ENST00000431429 POLMQ9NP87 494 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P27-201ENST00000431429 MICAL2O94851 1124 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 GTF2E1P29083 439 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 INPP5BP32019 993 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 POU4F2Q12837 409 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 CTC1Q2NKJ3 1217 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 NBPF1Q3BBV0 1214 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 XKR5Q6UX68 686 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 LYSMD3Q7Z3D4 306 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 RHPN1Q8TCX5 695 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 ZIC5Q96T25 663 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 CRISPLD1Q9H336 500 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 GGNBP2Q9H3C7 697 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 PDZRN3Q9UPQ7 1066 aa5.29□□□□□ -1.56
HMGB1P27-201ENST00000431429 A0A1B0GTH6 734 aa5.28□□□□□ -1.56
HMGB1P27-201ENST00000431429 PRPF40AO75400 957 aaKnown RBP5.28□□□□□ -1.56
HMGB1P27-201ENST00000431429 UPP2O95045 317 aa5.28□□□□□ -1.56
HMGB1P27-201ENST00000431429 BMP2P12643 396 aa5.28□□□□□ -1.56
HMGB1P27-201ENST00000431429 PLCB3Q01970 1234 aa5.28□□□□□ -1.56
HMGB1P27-201ENST00000431429 KCNMB2Q9Y691 235 aa5.28□□□□□ -1.56
HMGB1P27-201ENST00000431429 SENP3-EIF4A1A0A087X0R7 540 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 TTLL8A6PVC2 850 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 DGAT1O75907 488 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 TATP17735 454 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 MSX1P28360 303 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 PHKA2P46019 1235 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 DAB2P98082 770 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 DNM1Q05193 864 aaKnown RBP5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 TYRO3Q06418 890 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 SAMD5Q5TGI4 173 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 PRICKLE2Q7Z3G6 844 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 TMC4Q7Z404 712 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 GPR152Q8TDT2 470 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 NUDT16Q96DE0 195 aaKnown RBP5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 HSH2DQ96JZ2 352 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 NIF3L1Q9GZT8 377 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 C11orf16Q9NQ32 467 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 FAM13BQ9NYF5 915 aa5.27□□□□□ -1.57
HMGB1P27-201ENST00000431429 FAM187AA6NFU0 413 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 EGFRP00533 1210 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 RPLP1P05386 114 aaKnown RBP5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 LDHBP07195 334 aaKnown RBP5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 THBS1P07996 1170 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 BMP1P13497 986 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 TCF3P15923 654 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 IDH3AP50213 366 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 FGD1P98174 961 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 UBAP2LQ14157 1087 aaKnown RBP5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 TRIP4Q15650 581 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 C6orf118Q5T5N4 469 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 BTLAQ7Z6A9 289 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 FBF1Q8TES7 1133 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 SETDB2Q96T68 719 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 DNAJC25Q9H1X3 360 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 RNF19AQ9NV58 838 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 ANKIB1Q9P2G1 1089 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 DNMT3LQ9UJW3 386 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 WWC3Q9ULE0 1092 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 DYRK1BQ9Y463 629 aa5.26□□□□□ -1.57
HMGB1P27-201ENST00000431429 ARSDP51689 593 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms