RNA–Protein interactions for RNA: ENST00000428888.1

AC009495.1-201, humanhuman

TSL 5 BASIC

Gene AC009495.1, Length 372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009495.1-201ENST00000428888 ABCC6O95255 1503 aa11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 PLIN1O60240 522 aa11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 OATP04181 439 aa11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 PPP4CP60510 307 aa11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 EXOSC9Q06265 439 aaKnown RBP11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 PLEKHO1Q53GL0 409 aaPredicted RBP11.88□□□□□ -0.51
AC009495.1-201ENST00000428888 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
AC009495.1-201ENST00000428888 GNAT3A8MTJ3 354 aa11.87□□□□□ -0.51
AC009495.1-201ENST00000428888 DNAJB2P25686 324 aa11.87□□□□□ -0.51
AC009495.1-201ENST00000428888 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
AC009495.1-201ENST00000428888 FAM161AQ3B820 660 aa11.87□□□□□ -0.51
AC009495.1-201ENST00000428888 AMOTQ4VCS5 1084 aa11.87□□□□□ -0.51
AC009495.1-201ENST00000428888 MCM10Q7L590 875 aa11.87□□□□□ -0.51
AC009495.1-201ENST00000428888 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
AC009495.1-201ENST00000428888 FECHP22830 423 aa11.86□□□□□ -0.51
AC009495.1-201ENST00000428888 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
AC009495.1-201ENST00000428888 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
AC009495.1-201ENST00000428888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
AC009495.1-201ENST00000428888 RAPGEF4Q8WZA2 1011 aa11.86□□□□□ -0.51
AC009495.1-201ENST00000428888 MAP3K5Q99683 1374 aa11.86□□□□□ -0.51
AC009495.1-201ENST00000428888 RNF40O75150 1001 aa11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 BCAR3O75815 825 aa11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 MBIPQ9NS73 344 aa11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 AHDC1Q5TGY3 1603 aaPredicted RBP11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 NCAPD2Q15021 1401 aa11.85□□□□□ -0.51
AC009495.1-201ENST00000428888 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
AC009495.1-201ENST00000428888 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
AC009495.1-201ENST00000428888 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
AC009495.1-201ENST00000428888 C1orf141Q5JVX7 400 aa11.84□□□□□ -0.51
AC009495.1-201ENST00000428888 PXYLP1Q8TE99 480 aa11.84□□□□□ -0.51
AC009495.1-201ENST00000428888 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
AC009495.1-201ENST00000428888 RCCD1A6NED2 376 aa11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 CHL1O00533 1208 aa11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 EXOC6Q8TAG9 804 aa11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 ZNF428Q96B54 188 aa11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 TMEM134Q9H6X4 195 aa11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
AC009495.1-201ENST00000428888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 EVA1CP58658 441 aa11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 AKAP4Q5JQC9 854 aa11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 CRBNQ96SW2 442 aa11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 CRB1P82279 1406 aa11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 CRYBG1Q9Y4K1 1723 aa11.82□□□□□ -0.52
AC009495.1-201ENST00000428888 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
AC009495.1-201ENST00000428888 ALDH1L2Q3SY69 923 aa11.81□□□□□ -0.52
AC009495.1-201ENST00000428888 SSH1Q8WYL5 1049 aa11.81□□□□□ -0.52
AC009495.1-201ENST00000428888 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
AC009495.1-201ENST00000428888 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
AC009495.1-201ENST00000428888 DLG5Q8TDM6 1919 aa11.81□□□□□ -0.52
AC009495.1-201ENST00000428888 WDR17Q8IZU2 1322 aa11.81□□□□□ -0.52
AC009495.1-201ENST00000428888 COL18A1P39060 1754 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 MS4A1P11836 297 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 C20orf194Q5TEA3 1177 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 ZKSCAN2Q63HK3 967 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 STRN4Q9NRL3 753 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
AC009495.1-201ENST00000428888 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 IPO8O15397 1037 aaKnown RBP11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 VAMP4O75379 141 aa11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 TEFQ10587 303 aa11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 TAF7Q15545 349 aaPredicted RBP11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 C8orf58Q8NAV2 365 aa11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
AC009495.1-201ENST00000428888 RGPD2P0DJD1 1756 aa11.78□□□□□ -0.52
AC009495.1-201ENST00000428888 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
AC009495.1-201ENST00000428888 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
AC009495.1-201ENST00000428888 CARD10Q9BWT7 1032 aa11.78□□□□□ -0.52
AC009495.1-201ENST00000428888 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
AC009495.1-201ENST00000428888 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
AC009495.1-201ENST00000428888 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
AC009495.1-201ENST00000428888 ABCA3Q99758 1704 aa11.77□□□□□ -0.52
AC009495.1-201ENST00000428888 RGPD5Q99666 1765 aa11.77□□□□□ -0.52
AC009495.1-201ENST00000428888 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
AC009495.1-201ENST00000428888 ITGBL1O95965 494 aaPredicted RBP11.77□□□□□ -0.53
AC009495.1-201ENST00000428888 MAP2K5Q13163 448 aa11.77□□□□□ -0.53
AC009495.1-201ENST00000428888 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.53
AC009495.1-201ENST00000428888 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
AC009495.1-201ENST00000428888 BTG4Q9NY30 223 aa11.77□□□□□ -0.53
AC009495.1-201ENST00000428888 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
AC009495.1-201ENST00000428888 MEGF6O75095 1541 aa11.76□□□□□ -0.53
AC009495.1-201ENST00000428888 HSP90AB1P08238 724 aaKnown RBP11.76□□□□□ -0.53
AC009495.1-201ENST00000428888 LARP1Q6PKG0 1096 aaKnown RBP11.76□□□□□ -0.53
AC009495.1-201ENST00000428888 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms