RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 PKNOX2Q96KN3 472 aa16.66■□□□□ 0.26
STRC-201ENST00000428650 GTPBP4Q9BZE4 634 aaKnown RBP16.66■□□□□ 0.26
STRC-201ENST00000428650 TNNT1P13805 278 aa16.66■□□□□ 0.26
STRC-201ENST00000428650 GJB2P29033 226 aa16.66■□□□□ 0.26
STRC-201ENST00000428650 CNNM3Q8NE01 707 aa16.66■□□□□ 0.26
STRC-201ENST00000428650 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
STRC-201ENST00000428650 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 FSIP1Q8NA03 581 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 TMOD2Q9NZR1 351 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 FANCAO15360 1455 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 GOLGA8AA7E2F4 631 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 ALDH1L1O75891 902 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 KIF5BP33176 963 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 KIF4BQ2VIQ3 1234 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
STRC-201ENST00000428650 CATIPQ7Z7H3 387 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 ENOX2Q16206 610 aaKnown RBP16.64■□□□□ 0.25
STRC-201ENST00000428650 ALS2CR12Q96Q35 445 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
STRC-201ENST00000428650 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 GOLIM4O00461 696 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 UQCRFS1P1P0C7P4 283 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
STRC-201ENST00000428650 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 RMND1Q9NWS8 449 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.25
STRC-201ENST00000428650 SSBP05455 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
STRC-201ENST00000428650 ANKRD44Q8N8A2 993 aa16.63■□□□□ 0.25
STRC-201ENST00000428650 CACNA2D4Q7Z3S7 1137 aa16.63■□□□□ 0.25
STRC-201ENST00000428650 CCDC91Q7Z6B0 441 aa16.63■□□□□ 0.25
STRC-201ENST00000428650 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
STRC-201ENST00000428650 URI1O94763 535 aaPredicted RBP16.62■□□□□ 0.25
STRC-201ENST00000428650 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 ADCY5O95622 1261 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 USP5P45974 858 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 TMTC2Q8N394 836 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 CCDC194A0A1B0GVG4 234 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 USP25Q9UHP3 1055 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 GCOM1H8Y6P7 765 aaPredicted RBP16.62■□□□□ 0.25
STRC-201ENST00000428650 LDHCP07864 332 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 MYZAPP0CAP1 466 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
STRC-201ENST00000428650 IARSP41252 1262 aaKnown RBP16.61■□□□□ 0.25
STRC-201ENST00000428650 BMS1Q14692 1282 aaKnown RBP16.61■□□□□ 0.25
STRC-201ENST00000428650 UHRF1BP1Q6BDS2 1440 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 KCNG4Q8TDN1 519 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 CCDC102BQ68D86 513 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
STRC-201ENST00000428650 CLCN1P35523 988 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 ZNF165P49910 485 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 SPAG1Q07617 926 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
STRC-201ENST00000428650 ZSCAN23Q3MJ62 389 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 STXBP4Q6ZWJ1 553 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 TAOK3Q9H2K8 898 aa16.61■□□□□ 0.25
STRC-201ENST00000428650 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
STRC-201ENST00000428650 IFNL2Q8IZJ0 200 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 POLR3DP05423 398 aaPredicted RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 SKIDA1Q1XH10 827 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 IFI16Q16666 785 aaKnown RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 DDX12PQ92771 950 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 IGHDP01880 384 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 SPTY2D1Q68D10 685 aaPredicted RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 CALML4Q96GE6 196 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 CFAP43Q8NDM7 1665 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 SF3B2Q13435 895 aaKnown RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 SNW1Q13573 536 aaKnown RBP16.6■□□□□ 0.25
STRC-201ENST00000428650 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 PLCH2O75038 1416 aa16.6■□□□□ 0.25
STRC-201ENST00000428650 CETN1Q12798 172 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 CUL5Q93034 780 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.59■□□□□ 0.25
STRC-201ENST00000428650 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
STRC-201ENST00000428650 CCDC8Q9H0W5 538 aaPredicted RBP16.59■□□□□ 0.25
STRC-201ENST00000428650 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 NPC1L1Q9UHC9 1359 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 TRAF1Q13077 416 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 RHPN1Q8TCX5 695 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 ABCF2Q9UG63 623 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 CKAP4Q07065 602 aaKnown RBP16.59■□□□□ 0.25
STRC-201ENST00000428650 LUZP1Q86V48 1076 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 INTS4Q96HW7 963 aaKnown RBP16.59■□□□□ 0.25
STRC-201ENST00000428650 CENPHQ9H3R5 247 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 RAD50Q92878 1312 aa16.59■□□□□ 0.25
STRC-201ENST00000428650 IDI1Q13907 227 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms