RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 TRAPPC3LQ5T215 181 aa11.45□□□□□ -0.58
VSIG4-203ENST00000427538 RGPD3A6NKT7 1758 aaPredicted RBP11.45□□□□□ -0.58
VSIG4-203ENST00000427538 RGPD4Q7Z3J3 1758 aa11.45□□□□□ -0.58
VSIG4-203ENST00000427538 ITGB4P16144 1822 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 STK25O00506 426 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 CANXP27824 592 aaKnown RBP11.44□□□□□ -0.58
VSIG4-203ENST00000427538 SSFA2P28290 1259 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 RFC4P35249 363 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 CCDC27Q2M243 656 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
VSIG4-203ENST00000427538 WWC1Q8IX03 1113 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 SLC4A9Q96Q91 983 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 IFT57Q9NWB7 429 aa11.44□□□□□ -0.58
VSIG4-203ENST00000427538 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
VSIG4-203ENST00000427538 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
VSIG4-203ENST00000427538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
VSIG4-203ENST00000427538 SNPHO15079 494 aa11.43□□□□□ -0.58
VSIG4-203ENST00000427538 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
VSIG4-203ENST00000427538 SPON1Q9HCB6 807 aa11.43□□□□□ -0.58
VSIG4-203ENST00000427538 ZPR1O75312 459 aa11.42□□□□□ -0.58
VSIG4-203ENST00000427538 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
VSIG4-203ENST00000427538 CYP19A1P11511 503 aaPredicted RBP11.42□□□□□ -0.58
VSIG4-203ENST00000427538 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
VSIG4-203ENST00000427538 POLD1P28340 1107 aa11.42□□□□□ -0.58
VSIG4-203ENST00000427538 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
VSIG4-203ENST00000427538 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
VSIG4-203ENST00000427538 CHMP4AQ9BY43 222 aa11.42□□□□□ -0.58
VSIG4-203ENST00000427538 RREB1Q92766 1687 aa11.42□□□□□ -0.58
VSIG4-203ENST00000427538 PNPLA7Q6ZV29 1317 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 NUP188Q5SRE5 1749 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 A0A087WZG4 1122 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 CHL1O00533 1208 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 COL23A1Q86Y22 540 aaPredicted RBP11.41□□□□□ -0.58
VSIG4-203ENST00000427538 WDR63Q8IWG1 891 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
VSIG4-203ENST00000427538 MTFR1LQ9H019 292 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 MYH16Q9H6N6 1097 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
VSIG4-203ENST00000427538 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.58
VSIG4-203ENST00000427538 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
VSIG4-203ENST00000427538 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
VSIG4-203ENST00000427538 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
VSIG4-203ENST00000427538 ZBTB1Q9Y2K1 713 aa11.4□□□□□ -0.58
VSIG4-203ENST00000427538 LY75O60449 1722 aa11.4□□□□□ -0.58
VSIG4-203ENST00000427538 IL16Q14005 1332 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
VSIG4-203ENST00000427538 ST18O60284 1047 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 A1BGP04217 495 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
VSIG4-203ENST00000427538 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 INTS5Q6P9B9 1019 aaKnown RBP11.39□□□□□ -0.59
VSIG4-203ENST00000427538 SMIM5Q71RC9 77 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 KCPQ6ZWJ8 1503 aa11.39□□□□□ -0.59
VSIG4-203ENST00000427538 MYL6BP14649 208 aa11.38□□□□□ -0.59
VSIG4-203ENST00000427538 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
VSIG4-203ENST00000427538 HDGFL1Q5TGJ6 251 aa11.38□□□□□ -0.59
VSIG4-203ENST00000427538 DUSP27Q5VZP5 1158 aa11.38□□□□□ -0.59
VSIG4-203ENST00000427538 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
VSIG4-203ENST00000427538 PDGFDQ9GZP0 370 aaPredicted RBP11.38□□□□□ -0.59
VSIG4-203ENST00000427538 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
VSIG4-203ENST00000427538 C5P01031 1676 aa11.37□□□□□ -0.59
VSIG4-203ENST00000427538 NPHP1O15259 732 aa11.37□□□□□ -0.59
VSIG4-203ENST00000427538 PIP4K2AP48426 406 aaPredicted RBP11.37□□□□□ -0.59
VSIG4-203ENST00000427538 NLGN1Q8N2Q7 840 aa11.37□□□□□ -0.59
VSIG4-203ENST00000427538 SOS1Q07889 1333 aaPredicted RBP11.36□□□□□ -0.59
VSIG4-203ENST00000427538 HOXB7P09629 217 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 ZNF853P0CG23 659 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 KIF6Q6ZMV9 814 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 DZIP3Q86Y13 1208 aaKnown RBP11.36□□□□□ -0.59
VSIG4-203ENST00000427538 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 TBC1D2BQ9UPU7 963 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 ZNF652Q9Y2D9 606 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 COL15A1P39059 1388 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 DLG5Q8TDM6 1919 aa11.36□□□□□ -0.59
VSIG4-203ENST00000427538 PAPPAQ13219 1627 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 E9PSI1 815 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 EIF5P55010 431 aaKnown RBP11.35□□□□□ -0.59
VSIG4-203ENST00000427538 KRT24Q2M2I5 525 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 TWISTNBQ3B726 338 aaPredicted RBP11.35□□□□□ -0.59
VSIG4-203ENST00000427538 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 DBF4Q9UBU7 674 aaPredicted RBP11.35□□□□□ -0.59
VSIG4-203ENST00000427538 PARP3Q9Y6F1 533 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
VSIG4-203ENST00000427538 AIMP1Q12904 312 aaKnown RBP11.34□□□□□ -0.59
VSIG4-203ENST00000427538 BICDL1Q6ZP65 573 aa11.34□□□□□ -0.59
VSIG4-203ENST00000427538 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
VSIG4-203ENST00000427538 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
VSIG4-203ENST00000427538 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
VSIG4-203ENST00000427538 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
VSIG4-203ENST00000427538 NARFQ9UHQ1 456 aa11.34□□□□□ -0.59
VSIG4-203ENST00000427538 USP42Q9H9J4 1324 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms