RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 NBPF5PQ86XG9 351 aaPredicted RBP24.13■■□□□ 1.45
GPC1-205ENST00000427506 TTLL6Q8N841 843 aa24.12■■□□□ 1.45
GPC1-205ENST00000427506 ZNF622Q969S3 477 aaKnown RBP eCLIP24.12■■□□□ 1.45
GPC1-205ENST00000427506 TRIM35Q9UPQ4 493 aa24.12■■□□□ 1.45
GPC1-205ENST00000427506 PDZRN3Q9UPQ7 1066 aa24.12■■□□□ 1.45
GPC1-205ENST00000427506 NIP7Q9Y221 180 aaKnown RBP eCLIP24.12■■□□□ 1.45
GPC1-205ENST00000427506 EIF2S2P20042 333 aaKnown RBP24.11■■□□□ 1.45
GPC1-205ENST00000427506 KIF6Q6ZMV9 814 aa24.11■■□□□ 1.45
GPC1-205ENST00000427506 ARFGEF1Q9Y6D6 1849 aa24.11■■□□□ 1.45
GPC1-205ENST00000427506 RGL2O15211 777 aa24.1■■□□□ 1.45
GPC1-205ENST00000427506 HLFQ16534 295 aa24.1■■□□□ 1.45
GPC1-205ENST00000427506 FAM177BA6PVY3 158 aa24.09■■□□□ 1.45
GPC1-205ENST00000427506 C1QTNF8P60827 252 aa24.09■■□□□ 1.45
GPC1-205ENST00000427506 ERBB4Q15303 1308 aa24.09■■□□□ 1.45
GPC1-205ENST00000427506 C9orf131Q5VYM1 1079 aa24.08■■□□□ 1.45
GPC1-205ENST00000427506 TPTE2Q6XPS3 522 aa24.08■■□□□ 1.45
GPC1-205ENST00000427506 ERVV-1B6SEH8 477 aa24.07■■□□□ 1.44
GPC1-205ENST00000427506 CHL1O00533 1208 aa24.07■■□□□ 1.44
GPC1-205ENST00000427506 TTLL7Q6ZT98 887 aa24.07■■□□□ 1.44
GPC1-205ENST00000427506 MAP3K15Q6ZN16 1313 aa24.07■■□□□ 1.44
GPC1-205ENST00000427506 APAF1O14727 1248 aa24.06■■□□□ 1.44
GPC1-205ENST00000427506 GTF2E1P29083 439 aaPredicted RBP24.06■■□□□ 1.44
GPC1-205ENST00000427506 ZBTB3Q9H5J0 574 aa24.06■■□□□ 1.44
GPC1-205ENST00000427506 NECTIN2Q92692 538 aa24.05■■□□□ 1.44
GPC1-205ENST00000427506 RNF181Q9P0P0 153 aa24.05■■□□□ 1.44
GPC1-205ENST00000427506 DLEC1Q9Y238 1755 aa24.05■■□□□ 1.44
GPC1-205ENST00000427506 ANKRD31Q8N7Z5 1873 aa24.04■■□□□ 1.44
GPC1-205ENST00000427506 ZNF219Q9P2Y4 722 aaPredicted RBP24.04■■□□□ 1.44
GPC1-205ENST00000427506 ANP32CO43423 234 aa24.03■■□□□ 1.44
GPC1-205ENST00000427506 RASSF7Q02833 373 aa24.03■■□□□ 1.44
GPC1-205ENST00000427506 SRGNP10124 158 aa24.02■■□□□ 1.44
GPC1-205ENST00000427506 KRT24Q2M2I5 525 aa24.02■■□□□ 1.44
GPC1-205ENST00000427506 CCDC184Q52MB2 194 aa24.02■■□□□ 1.44
GPC1-205ENST00000427506 STYK1Q6J9G0 422 aa24.02■■□□□ 1.44
GPC1-205ENST00000427506 CNKSR1Q969H4 720 aa24.02■■□□□ 1.44
GPC1-205ENST00000427506 MASTLQ96GX5 879 aa24.02■■□□□ 1.44
GPC1-205ENST00000427506 C21orf2O43822 256 aa24.01■■□□□ 1.43
GPC1-205ENST00000427506 ANXA1P04083 346 aa24.01■■□□□ 1.43
GPC1-205ENST00000427506 GPTP24298 496 aa24.01■■□□□ 1.43
GPC1-205ENST00000427506 PDIA6Q15084 440 aa24.01■■□□□ 1.43
GPC1-205ENST00000427506 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
GPC1-205ENST00000427506 NYXQ9GZU5 481 aa24.01■■□□□ 1.43
GPC1-205ENST00000427506 CALD1Q05682 793 aaKnown RBP24■■□□□ 1.43
GPC1-205ENST00000427506 COL11A2P13942 1736 aaPredicted RBP23.99■■□□□ 1.43
GPC1-205ENST00000427506 PROSER3Q2NL68 480 aa23.99■■□□□ 1.43
GPC1-205ENST00000427506 GIGYF2Q6Y7W6 1299 aaKnown RBP23.99■■□□□ 1.43
GPC1-205ENST00000427506 NPR1P16066 1061 aa23.98■■□□□ 1.43
GPC1-205ENST00000427506 AIMP1Q12904 312 aaKnown RBP23.98■■□□□ 1.43
GPC1-205ENST00000427506 SENP3-EIF4A1A0A087X0R7 540 aa23.97■■□□□ 1.43
GPC1-205ENST00000427506 LMNB1P20700 586 aa23.97■■□□□ 1.43
GPC1-205ENST00000427506 HDGFL1Q5TGJ6 251 aa23.97■■□□□ 1.43
GPC1-205ENST00000427506 PRPF40BQ6NWY9 871 aaKnown RBP23.97■■□□□ 1.43
GPC1-205ENST00000427506 LRP10Q7Z4F1 713 aa23.97■■□□□ 1.43
GPC1-205ENST00000427506 NUTM1Q86Y26 1132 aa23.97■■□□□ 1.43
GPC1-205ENST00000427506 MRS2Q9HD23 443 aa23.97■■□□□ 1.43
GPC1-205ENST00000427506 MBIPQ9NS73 344 aa23.97■■□□□ 1.43
GPC1-205ENST00000427506 COPS6Q7L5N1 327 aa23.96■■□□□ 1.43
GPC1-205ENST00000427506 DDX21Q9NR30 783 aaKnown RBP eCLIP23.96■■□□□ 1.43
GPC1-205ENST00000427506 NUP98P52948 1817 aa23.96■■□□□ 1.43
GPC1-205ENST00000427506 UBN2Q6ZU65 1347 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 NFKBIEO00221 500 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 HOXB7P09629 217 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 GNAI1P63096 354 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 ERFEQ4G0M1 354 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 SUSD4Q5VX71 490 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 ZNF34Q8IZ26 560 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 XAGE3Q8WTP9 111 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 IFT57Q9NWB7 429 aa23.95■■□□□ 1.42
GPC1-205ENST00000427506 KDM2BQ8NHM5 1336 aa23.94■■□□□ 1.42
GPC1-205ENST00000427506 KLRG2A4D1S0 409 aaPredicted RBP23.94■■□□□ 1.42
GPC1-205ENST00000427506 KIF3CO14782 793 aa23.94■■□□□ 1.42
GPC1-205ENST00000427506 DUSP27Q5VZP5 1158 aa23.94■■□□□ 1.42
GPC1-205ENST00000427506 PPP1R42Q7Z4L9 355 aa23.94■■□□□ 1.42
GPC1-205ENST00000427506 CHPF2Q9P2E5 772 aa23.94■■□□□ 1.42
GPC1-205ENST00000427506 ZNF853P0CG23 659 aa23.93■■□□□ 1.42
GPC1-205ENST00000427506 PARP10Q53GL7 1025 aa23.93■■□□□ 1.42
GPC1-205ENST00000427506 SOGA3Q5TF21 947 aa23.93■■□□□ 1.42
GPC1-205ENST00000427506 NMRK2Q9NPI5 230 aa23.93■■□□□ 1.42
GPC1-205ENST00000427506 PRELPP51888 382 aa23.92■■□□□ 1.42
GPC1-205ENST00000427506 ABCC12Q96J65 1359 aa23.91■■□□□ 1.42
GPC1-205ENST00000427506 IBTKQ9P2D0 1353 aaPredicted RBP23.91■■□□□ 1.42
GPC1-205ENST00000427506 ALDH1B1P30837 517 aa23.91■■□□□ 1.42
GPC1-205ENST00000427506 HSP90AB3PQ58FF7 597 aa23.91■■□□□ 1.42
GPC1-205ENST00000427506 DBF4Q9UBU7 674 aaPredicted RBP23.91■■□□□ 1.42
GPC1-205ENST00000427506 SBF1O95248 1867 aa23.91■■□□□ 1.42
GPC1-205ENST00000427506 ZC3H4Q9UPT8 1303 aaKnown RBP23.9■■□□□ 1.42
GPC1-205ENST00000427506 SLX4Q8IY92 1834 aa23.9■■□□□ 1.42
GPC1-205ENST00000427506 NTSR2O95665 410 aa23.9■■□□□ 1.42
GPC1-205ENST00000427506 TAOK3Q9H2K8 898 aa23.9■■□□□ 1.42
GPC1-205ENST00000427506 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
GPC1-205ENST00000427506 RPGRQ92834 1020 aaKnown RBP23.89■■□□□ 1.41
GPC1-205ENST00000427506 UTP14AQ9BVJ6 771 aaKnown RBP23.89■■□□□ 1.41
GPC1-205ENST00000427506 CACNA1SQ13698 1873 aa23.89■■□□□ 1.41
GPC1-205ENST00000427506 CCDC93Q567U6 631 aa23.88■■□□□ 1.41
GPC1-205ENST00000427506 C16orf71Q8IYS4 520 aaPredicted RBP23.88■■□□□ 1.41
GPC1-205ENST00000427506 HYPKQ9NX55 129 aa23.88■■□□□ 1.41
GPC1-205ENST00000427506 LTBP3Q9NS15 1303 aa23.87■■□□□ 1.41
GPC1-205ENST00000427506 CRY2Q49AN0 593 aa23.87■■□□□ 1.41
GPC1-205ENST00000427506 C7orf43Q8WVR3 580 aa23.87■■□□□ 1.41
GPC1-205ENST00000427506 RRAGCQ9HB90 399 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms