RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 CLEC4GQ6UXB4 293 aa21.07■□□□□ 0.96
HLA-DQB2-230ENST00000427449 ABCC12Q96J65 1359 aa21.07■□□□□ 0.96
HLA-DQB2-230ENST00000427449 RIC1Q4ADV7 1423 aa21.06■□□□□ 0.96
HLA-DQB2-230ENST00000427449 NEFMP07197 916 aa21.06■□□□□ 0.96
HLA-DQB2-230ENST00000427449 KRT24Q2M2I5 525 aa21.06■□□□□ 0.96
HLA-DQB2-230ENST00000427449 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
HLA-DQB2-230ENST00000427449 TTLL7Q6ZT98 887 aa21.06■□□□□ 0.96
HLA-DQB2-230ENST00000427449 BABAM1Q9NWV8 329 aa21.06■□□□□ 0.96
HLA-DQB2-230ENST00000427449 CHL1O00533 1208 aa21.05■□□□□ 0.96
HLA-DQB2-230ENST00000427449 PROSER3Q2NL68 480 aa21.05■□□□□ 0.96
HLA-DQB2-230ENST00000427449 BRIP1Q9BX63 1249 aa21.05■□□□□ 0.96
HLA-DQB2-230ENST00000427449 ERBB4Q15303 1308 aa21.04■□□□□ 0.96
HLA-DQB2-230ENST00000427449 UBN2Q6ZU65 1347 aa21.04■□□□□ 0.96
HLA-DQB2-230ENST00000427449 KLRG2A4D1S0 409 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB2-230ENST00000427449 TSPYL4Q9UJ04 414 aa21.04■□□□□ 0.96
HLA-DQB2-230ENST00000427449 IBTKQ9P2D0 1353 aaPredicted RBP21.03■□□□□ 0.96
HLA-DQB2-230ENST00000427449 NFKBIEO00221 500 aa21.03■□□□□ 0.96
HLA-DQB2-230ENST00000427449 C1QTNF8P60827 252 aa21.03■□□□□ 0.96
HLA-DQB2-230ENST00000427449 RASSF7Q02833 373 aa21.03■□□□□ 0.96
HLA-DQB2-230ENST00000427449 C2CD5Q86YS7 1000 aa21.03■□□□□ 0.96
HLA-DQB2-230ENST00000427449 MAP3K15Q6ZN16 1313 aa21.03■□□□□ 0.96
HLA-DQB2-230ENST00000427449 KIF3CO14782 793 aa21.02■□□□□ 0.96
HLA-DQB2-230ENST00000427449 ZNF853P0CG23 659 aa21.02■□□□□ 0.96
HLA-DQB2-230ENST00000427449 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
HLA-DQB2-230ENST00000427449 ARHGAP27Q6ZUM4 889 aa21.02■□□□□ 0.96
HLA-DQB2-230ENST00000427449 CNBD1Q8NA66 436 aa21.02■□□□□ 0.96
HLA-DQB2-230ENST00000427449 SETDB2Q96T68 719 aa21.02■□□□□ 0.96
HLA-DQB2-230ENST00000427449 TAF1P21675 1872 aa21.01■□□□□ 0.95
HLA-DQB2-230ENST00000427449 SRGNP10124 158 aa21.01■□□□□ 0.95
HLA-DQB2-230ENST00000427449 LMOD3Q0VAK6 560 aa21.01■□□□□ 0.95
HLA-DQB2-230ENST00000427449 COL4A1P02462 1669 aa21.01■□□□□ 0.95
HLA-DQB2-230ENST00000427449 ERVV-1B6SEH8 477 aa21■□□□□ 0.95
HLA-DQB2-230ENST00000427449 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
HLA-DQB2-230ENST00000427449 WDR90Q96KV7 1748 aa21■□□□□ 0.95
HLA-DQB2-230ENST00000427449 ANXA1P04083 346 aa20.99■□□□□ 0.95
HLA-DQB2-230ENST00000427449 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
HLA-DQB2-230ENST00000427449 C9orf131Q5VYM1 1079 aa20.99■□□□□ 0.95
HLA-DQB2-230ENST00000427449 LRRC37AA6NMS7 1700 aa20.98■□□□□ 0.95
HLA-DQB2-230ENST00000427449 TTLL6Q8N841 843 aa20.98■□□□□ 0.95
HLA-DQB2-230ENST00000427449 C7orf43Q8WVR3 580 aa20.98■□□□□ 0.95
HLA-DQB2-230ENST00000427449 NIP7Q9Y221 180 aaKnown RBP eCLIP20.98■□□□□ 0.95
HLA-DQB2-230ENST00000427449 COL4A5P29400 1685 aa20.97■□□□□ 0.95
HLA-DQB2-230ENST00000427449 H0YIN7 160 aa20.97■□□□□ 0.95
HLA-DQB2-230ENST00000427449 MYL6BP14649 208 aa20.97■□□□□ 0.95
HLA-DQB2-230ENST00000427449 ZNF34Q8IZ26 560 aa20.97■□□□□ 0.95
HLA-DQB2-230ENST00000427449 ZNF526Q8TF50 670 aaPredicted RBP20.97■□□□□ 0.95
HLA-DQB2-230ENST00000427449 ZNF652Q9Y2D9 606 aa20.97■□□□□ 0.95
HLA-DQB2-230ENST00000427449 APAF1O14727 1248 aa20.96■□□□□ 0.95
HLA-DQB2-230ENST00000427449 PDE6BP35913 854 aa20.96■□□□□ 0.95
HLA-DQB2-230ENST00000427449 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 NTSR2O95665 410 aa20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 CRY2Q49AN0 593 aa20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 STYK1Q6J9G0 422 aa20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 SLC51AQ86UW1 340 aa20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 NBPF5PQ86XG9 351 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 ZBTB3Q9H5J0 574 aa20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 GPBP1L1Q9HC44 474 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 MBIPQ9NS73 344 aa20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 PDZRN3Q9UPQ7 1066 aa20.95■□□□□ 0.94
HLA-DQB2-230ENST00000427449 GIGYF2Q6Y7W6 1299 aaKnown RBP20.94■□□□□ 0.94
HLA-DQB2-230ENST00000427449 NGEFQ8N5V2 710 aa20.94■□□□□ 0.94
HLA-DQB2-230ENST00000427449 CFAP44Q96MT7 982 aa20.94■□□□□ 0.94
HLA-DQB2-230ENST00000427449 LTBP3Q9NS15 1303 aa20.94■□□□□ 0.94
HLA-DQB2-230ENST00000427449 LTBP1Q14766 1721 aa20.93■□□□□ 0.94
HLA-DQB2-230ENST00000427449 ST5P78524 1137 aa20.93■□□□□ 0.94
HLA-DQB2-230ENST00000427449 PRPF40BQ6NWY9 871 aaKnown RBP20.93■□□□□ 0.94
HLA-DQB2-230ENST00000427449 NMRK2Q9NPI5 230 aa20.93■□□□□ 0.94
HLA-DQB2-230ENST00000427449 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
HLA-DQB2-230ENST00000427449 SUSD4Q5VX71 490 aa20.92■□□□□ 0.94
HLA-DQB2-230ENST00000427449 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
HLA-DQB2-230ENST00000427449 HOXB7P09629 217 aa20.91■□□□□ 0.94
HLA-DQB2-230ENST00000427449 EIF2S2P20042 333 aaKnown RBP20.91■□□□□ 0.94
HLA-DQB2-230ENST00000427449 NUTM1Q86Y26 1132 aa20.91■□□□□ 0.94
HLA-DQB2-230ENST00000427449 MASTLQ96GX5 879 aa20.91■□□□□ 0.94
HLA-DQB2-230ENST00000427449 ZC3H4Q9UPT8 1303 aaKnown RBP20.91■□□□□ 0.94
HLA-DQB2-230ENST00000427449 ADAMTSL1Q8N6G6 1762 aa20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 C21orf2O43822 256 aa20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 GPTP24298 496 aa20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 OLFM4Q6UX06 510 aa20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 NPM2Q86SE8 214 aaKnown RBP20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 ZNF622Q969S3 477 aaKnown RBP eCLIP20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 DDX21Q9NR30 783 aaKnown RBP eCLIP20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 CHPF2Q9P2E5 772 aa20.9■□□□□ 0.94
HLA-DQB2-230ENST00000427449 DUOX1Q9NRD9 1551 aa20.89■□□□□ 0.94
HLA-DQB2-230ENST00000427449 CACNA1FO60840 1977 aa20.89■□□□□ 0.93
HLA-DQB2-230ENST00000427449 LMNB1P20700 586 aa20.89■□□□□ 0.93
HLA-DQB2-230ENST00000427449 KIF6Q6ZMV9 814 aa20.89■□□□□ 0.93
HLA-DQB2-230ENST00000427449 NECTIN2Q92692 538 aa20.89■□□□□ 0.93
HLA-DQB2-230ENST00000427449 IFT57Q9NWB7 429 aa20.89■□□□□ 0.93
HLA-DQB2-230ENST00000427449 FAM177BA6PVY3 158 aa20.88■□□□□ 0.93
HLA-DQB2-230ENST00000427449 NPR1P16066 1061 aa20.88■□□□□ 0.93
HLA-DQB2-230ENST00000427449 TPTE2Q6XPS3 522 aa20.88■□□□□ 0.93
HLA-DQB2-230ENST00000427449 XAGE3Q8WTP9 111 aa20.88■□□□□ 0.93
HLA-DQB2-230ENST00000427449 COPS6Q7L5N1 327 aa20.87■□□□□ 0.93
HLA-DQB2-230ENST00000427449 CNKSR1Q969H4 720 aa20.87■□□□□ 0.93
HLA-DQB2-230ENST00000427449 SCN4AP35499 1836 aa20.87■□□□□ 0.93
HLA-DQB2-230ENST00000427449 DUSP27Q5VZP5 1158 aa20.86■□□□□ 0.93
HLA-DQB2-230ENST00000427449 MYH3P11055 1940 aa20.86■□□□□ 0.93
HLA-DQB2-230ENST00000427449 POTECB2RU33 542 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms