RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 TTLL6Q8N841 843 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 CNBD1Q8NA66 436 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 NIP7Q9Y221 180 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC01238-202ENST00000426962 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
LINC01238-202ENST00000426962 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
LINC01238-202ENST00000426962 CCDC184Q52MB2 194 aa14.06□□□□□ -0.16
LINC01238-202ENST00000426962 KIF6Q6ZMV9 814 aa14.06□□□□□ -0.16
LINC01238-202ENST00000426962 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
LINC01238-202ENST00000426962 PDIA6Q15084 440 aa14.05□□□□□ -0.16
LINC01238-202ENST00000426962 TTLL7Q6ZT98 887 aa14.05□□□□□ -0.16
LINC01238-202ENST00000426962 ZNF622Q969S3 477 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINC01238-202ENST00000426962 MAP3K15Q6ZN16 1313 aa14.05□□□□□ -0.16
LINC01238-202ENST00000426962 SCN7AQ01118 1682 aa14.04□□□□□ -0.16
LINC01238-202ENST00000426962 GPBP1L1Q9HC44 474 aaPredicted RBP14.04□□□□□ -0.16
LINC01238-202ENST00000426962 ADCY9O60503 1353 aa14.04□□□□□ -0.16
LINC01238-202ENST00000426962 ATP10DQ9P241 1426 aa14.04□□□□□ -0.16
LINC01238-202ENST00000426962 BRCA1P38398 1863 aaKnown RBP14.04□□□□□ -0.16
LINC01238-202ENST00000426962 CALD1Q05682 793 aaKnown RBP14.03□□□□□ -0.16
LINC01238-202ENST00000426962 LRP10Q7Z4F1 713 aa14.03□□□□□ -0.16
LINC01238-202ENST00000426962 FAM177BA6PVY3 158 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 ZNF853P0CG23 659 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 SRGNP10124 158 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.17
LINC01238-202ENST00000426962 C1QTNF8P60827 252 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 KRT24Q2M2I5 525 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 C9orf131Q5VYM1 1079 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 STYK1Q6J9G0 422 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 GIGYF2Q6Y7W6 1299 aaKnown RBP14.02□□□□□ -0.17
LINC01238-202ENST00000426962 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 CNKSR1Q969H4 720 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 MASTLQ96GX5 879 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 NYXQ9GZU5 481 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 ZBTB3Q9H5J0 574 aa14.02□□□□□ -0.17
LINC01238-202ENST00000426962 LAMB4A4D0S4 1761 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 BCORQ6W2J9 1755 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 KLRG2A4D1S0 409 aaPredicted RBP14.01□□□□□ -0.17
LINC01238-202ENST00000426962 HOXB7P09629 217 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 GNAI1P63096 354 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 ZNF526Q8TF50 670 aaPredicted RBP14.01□□□□□ -0.17
LINC01238-202ENST00000426962 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 DDX21Q9NR30 783 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC01238-202ENST00000426962 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 IFT57Q9NWB7 429 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 ARFGEF1Q9Y6D6 1849 aa14.01□□□□□ -0.17
LINC01238-202ENST00000426962 ANXA1P04083 346 aa14□□□□□ -0.17
LINC01238-202ENST00000426962 PROSER3Q2NL68 480 aa14□□□□□ -0.17
LINC01238-202ENST00000426962 COPS6Q7L5N1 327 aa14□□□□□ -0.17
LINC01238-202ENST00000426962 ZNF34Q8IZ26 560 aa14□□□□□ -0.17
LINC01238-202ENST00000426962 C21orf2O43822 256 aa13.99□□□□□ -0.17
LINC01238-202ENST00000426962 NPR1P16066 1061 aa13.99□□□□□ -0.17
LINC01238-202ENST00000426962 GPTP24298 496 aa13.99□□□□□ -0.17
LINC01238-202ENST00000426962 AIMP1Q12904 312 aaKnown RBP13.99□□□□□ -0.17
LINC01238-202ENST00000426962 HDGFL1Q5TGJ6 251 aa13.99□□□□□ -0.17
LINC01238-202ENST00000426962 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
LINC01238-202ENST00000426962 RNF181Q9P0P0 153 aa13.99□□□□□ -0.17
LINC01238-202ENST00000426962 LMNB1P20700 586 aa13.98□□□□□ -0.17
LINC01238-202ENST00000426962 RASSF7Q02833 373 aa13.98□□□□□ -0.17
LINC01238-202ENST00000426962 CCDC27Q2M243 656 aa13.98□□□□□ -0.17
LINC01238-202ENST00000426962 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
LINC01238-202ENST00000426962 PARP10Q53GL7 1025 aa13.98□□□□□ -0.17
LINC01238-202ENST00000426962 SUSD4Q5VX71 490 aa13.98□□□□□ -0.17
LINC01238-202ENST00000426962 PPP1R42Q7Z4L9 355 aa13.98□□□□□ -0.17
LINC01238-202ENST00000426962 XAGE3Q8WTP9 111 aa13.98□□□□□ -0.17
LINC01238-202ENST00000426962 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
LINC01238-202ENST00000426962 DBF4Q9UBU7 674 aaPredicted RBP13.98□□□□□ -0.17
LINC01238-202ENST00000426962 ANKRD31Q8N7Z5 1873 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 UBN2Q6ZU65 1347 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 ALDH1B1P30837 517 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 ERFEQ4G0M1 354 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 SOGA3Q5TF21 947 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 PRPF40BQ6NWY9 871 aaKnown RBP13.97□□□□□ -0.17
LINC01238-202ENST00000426962 NUTM1Q86Y26 1132 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
LINC01238-202ENST00000426962 NFKBIEO00221 500 aa13.96□□□□□ -0.17
LINC01238-202ENST00000426962 TCIRG1Q13488 830 aa13.96□□□□□ -0.17
LINC01238-202ENST00000426962 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.17
LINC01238-202ENST00000426962 HYPKQ9NX55 129 aa13.96□□□□□ -0.17
LINC01238-202ENST00000426962 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.18
LINC01238-202ENST00000426962 IBTKQ9P2D0 1353 aaPredicted RBP13.96□□□□□ -0.18
LINC01238-202ENST00000426962 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
LINC01238-202ENST00000426962 KIF3CO14782 793 aa13.95□□□□□ -0.18
LINC01238-202ENST00000426962 NTSR2O95665 410 aa13.95□□□□□ -0.18
LINC01238-202ENST00000426962 PRELPP51888 382 aa13.95□□□□□ -0.18
LINC01238-202ENST00000426962 CRY2Q49AN0 593 aa13.95□□□□□ -0.18
LINC01238-202ENST00000426962 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
LINC01238-202ENST00000426962 WWC1Q8IX03 1113 aa13.95□□□□□ -0.18
LINC01238-202ENST00000426962 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
LINC01238-202ENST00000426962 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
LINC01238-202ENST00000426962 NUP98P52948 1817 aa13.94□□□□□ -0.18
LINC01238-202ENST00000426962 ZC3H4Q9UPT8 1303 aaKnown RBP13.94□□□□□ -0.18
LINC01238-202ENST00000426962 SLC10A5Q5PT55 438 aa13.94□□□□□ -0.18
LINC01238-202ENST00000426962 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
LINC01238-202ENST00000426962 PLBD2Q8NHP8 589 aa13.94□□□□□ -0.18
LINC01238-202ENST00000426962 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
LINC01238-202ENST00000426962 LTBP3Q9NS15 1303 aa13.93□□□□□ -0.18
LINC01238-202ENST00000426962 SENP3-EIF4A1A0A087X0R7 540 aa13.93□□□□□ -0.18
LINC01238-202ENST00000426962 NLRP10Q86W26 655 aa13.93□□□□□ -0.18
LINC01238-202ENST00000426962 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms