RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NECTIN2Q92692 538 aa17.81■□□□□ 0.44
SNX3-204ENST00000426155 BABAM1Q9NWV8 329 aa17.81■□□□□ 0.44
SNX3-204ENST00000426155 CACNA1SQ13698 1873 aa17.81■□□□□ 0.44
SNX3-204ENST00000426155 ARFGEF1Q9Y6D6 1849 aa17.81■□□□□ 0.44
SNX3-204ENST00000426155 ANXA1P04083 346 aa17.8■□□□□ 0.44
SNX3-204ENST00000426155 EIF2S2P20042 333 aaKnown RBP17.8■□□□□ 0.44
SNX3-204ENST00000426155 YY1P25490 414 aa17.8■□□□□ 0.44
SNX3-204ENST00000426155 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
SNX3-204ENST00000426155 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
SNX3-204ENST00000426155 CHRNA5P30532 468 aa17.79■□□□□ 0.44
SNX3-204ENST00000426155 TGFB2P61812 414 aa17.79■□□□□ 0.44
SNX3-204ENST00000426155 PROSER3Q2NL68 480 aa17.79■□□□□ 0.44
SNX3-204ENST00000426155 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
SNX3-204ENST00000426155 HLFQ16534 295 aa17.78■□□□□ 0.44
SNX3-204ENST00000426155 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
SNX3-204ENST00000426155 FAM9BQ8IZU0 186 aa17.78■□□□□ 0.44
SNX3-204ENST00000426155 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
SNX3-204ENST00000426155 ZNF853P0CG23 659 aa17.77■□□□□ 0.44
SNX3-204ENST00000426155 KCNA3P22001 575 aa17.77■□□□□ 0.44
SNX3-204ENST00000426155 PDIA6Q15084 440 aa17.77■□□□□ 0.44
SNX3-204ENST00000426155 TNRC6CQ9HCJ0 1690 aaKnown RBP17.77■□□□□ 0.43
SNX3-204ENST00000426155 PRR5LQ6MZQ0 368 aa17.76■□□□□ 0.43
SNX3-204ENST00000426155 LRP10Q7Z4F1 713 aa17.76■□□□□ 0.43
SNX3-204ENST00000426155 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
SNX3-204ENST00000426155 SALL2Q9Y467 1007 aaPredicted RBP17.76■□□□□ 0.43
SNX3-204ENST00000426155 ERBB4Q15303 1308 aa17.75■□□□□ 0.43
SNX3-204ENST00000426155 SETDB2Q96T68 719 aa17.75■□□□□ 0.43
SNX3-204ENST00000426155 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
SNX3-204ENST00000426155 BCS1LQ9Y276 419 aa17.75■□□□□ 0.43
SNX3-204ENST00000426155 MAP3K15Q6ZN16 1313 aa17.74■□□□□ 0.43
SNX3-204ENST00000426155 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
SNX3-204ENST00000426155 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
SNX3-204ENST00000426155 GRIN3BO60391 1043 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 GNAI1P63096 354 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 DUSP27Q5VZP5 1158 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 KIF6Q6ZMV9 814 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
SNX3-204ENST00000426155 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
SNX3-204ENST00000426155 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
SNX3-204ENST00000426155 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
SNX3-204ENST00000426155 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
SNX3-204ENST00000426155 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
SNX3-204ENST00000426155 ATP10DQ9P241 1426 aa17.72■□□□□ 0.43
SNX3-204ENST00000426155 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
SNX3-204ENST00000426155 UBN2Q6ZU65 1347 aa17.71■□□□□ 0.42
SNX3-204ENST00000426155 NPHP1O15259 732 aa17.7■□□□□ 0.42
SNX3-204ENST00000426155 GPTP24298 496 aa17.7■□□□□ 0.42
SNX3-204ENST00000426155 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
SNX3-204ENST00000426155 NBPF5PQ86XG9 351 aaPredicted RBP17.7■□□□□ 0.42
SNX3-204ENST00000426155 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
SNX3-204ENST00000426155 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
SNX3-204ENST00000426155 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
SNX3-204ENST00000426155 PIM2Q9P1W9 311 aa17.7■□□□□ 0.42
SNX3-204ENST00000426155 ABCC12Q96J65 1359 aa17.69■□□□□ 0.42
SNX3-204ENST00000426155 ERVV-1B6SEH8 477 aa17.69■□□□□ 0.42
SNX3-204ENST00000426155 HOXB7P09629 217 aa17.69■□□□□ 0.42
SNX3-204ENST00000426155 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
SNX3-204ENST00000426155 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNX3-204ENST00000426155 SLX4Q8IY92 1834 aa17.69■□□□□ 0.42
SNX3-204ENST00000426155 RGL2O15211 777 aa17.68■□□□□ 0.42
SNX3-204ENST00000426155 SBF1O95248 1867 aa17.68■□□□□ 0.42
SNX3-204ENST00000426155 ST5P78524 1137 aa17.68■□□□□ 0.42
SNX3-204ENST00000426155 DALRD3Q5D0E6 543 aaKnown RBP17.68■□□□□ 0.42
SNX3-204ENST00000426155 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
SNX3-204ENST00000426155 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
SNX3-204ENST00000426155 LAMB2P55268 1798 aa17.67■□□□□ 0.42
SNX3-204ENST00000426155 GIGYF2Q6Y7W6 1299 aaKnown RBP17.67■□□□□ 0.42
SNX3-204ENST00000426155 NUTM1Q86Y26 1132 aa17.67■□□□□ 0.42
SNX3-204ENST00000426155 CCDC88AQ3V6T2 1871 aa17.67■□□□□ 0.42
SNX3-204ENST00000426155 H0YIN7 160 aa17.66■□□□□ 0.42
SNX3-204ENST00000426155 ZNF428Q96B54 188 aa17.66■□□□□ 0.42
SNX3-204ENST00000426155 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
SNX3-204ENST00000426155 FANCIQ9NVI1 1328 aa17.66■□□□□ 0.42
SNX3-204ENST00000426155 PDE6BP35913 854 aa17.65■□□□□ 0.42
SNX3-204ENST00000426155 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
SNX3-204ENST00000426155 ARHGAP27Q6ZUM4 889 aa17.65■□□□□ 0.42
SNX3-204ENST00000426155 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
SNX3-204ENST00000426155 ZNF784Q8NCA9 323 aaPredicted RBP17.65■□□□□ 0.42
SNX3-204ENST00000426155 DBF4Q9UBU7 674 aaPredicted RBP17.65■□□□□ 0.42
SNX3-204ENST00000426155 ADCY9O60503 1353 aa17.65■□□□□ 0.42
SNX3-204ENST00000426155 TPTE2Q6XPS3 522 aa17.64■□□□□ 0.41
SNX3-204ENST00000426155 ZNF622Q969S3 477 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNX3-204ENST00000426155 IL16Q14005 1332 aa17.64■□□□□ 0.41
SNX3-204ENST00000426155 FER1L6Q2WGJ9 1857 aa17.63■□□□□ 0.41
SNX3-204ENST00000426155 TCERG1O14776 1098 aaKnown RBP17.63■□□□□ 0.41
SNX3-204ENST00000426155 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
SNX3-204ENST00000426155 PHAXQ9H814 394 aaKnown RBP17.63■□□□□ 0.41
SNX3-204ENST00000426155 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
SNX3-204ENST00000426155 TIAM2Q8IVF5 1701 aa17.63■□□□□ 0.41
SNX3-204ENST00000426155 DDX60Q8IY21 1712 aaKnown RBP17.63■□□□□ 0.41
SNX3-204ENST00000426155 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
SNX3-204ENST00000426155 NTSR2O95665 410 aa17.62■□□□□ 0.41
SNX3-204ENST00000426155 SRGNP10124 158 aa17.62■□□□□ 0.41
SNX3-204ENST00000426155 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
SNX3-204ENST00000426155 RASSF7Q02833 373 aa17.62■□□□□ 0.41
SNX3-204ENST00000426155 TTLL6Q8N841 843 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms