RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 MYL6BP14649 208 aa22.81■■□□□ 1.24
SLC6A1-202ENST00000425938 EIF2S2P20042 333 aaKnown RBP22.81■■□□□ 1.24
SLC6A1-202ENST00000425938 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
SLC6A1-202ENST00000425938 KIF6Q6ZMV9 814 aa22.81■■□□□ 1.24
SLC6A1-202ENST00000425938 CNBD1Q8NA66 436 aa22.8■■□□□ 1.24
SLC6A1-202ENST00000425938 DLEC1Q9Y238 1755 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 ST5P78524 1137 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 PRR5LQ6MZQ0 368 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 C2CD5Q86YS7 1000 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 CFAP44Q96MT7 982 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 PDZRN3Q9UPQ7 1066 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 NUP98P52948 1817 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 ANKRD31Q8N7Z5 1873 aa22.79■■□□□ 1.24
SLC6A1-202ENST00000425938 H0YIN7 160 aa22.78■■□□□ 1.24
SLC6A1-202ENST00000425938 PDE6BP35913 854 aa22.78■■□□□ 1.24
SLC6A1-202ENST00000425938 NBPF5PQ86XG9 351 aaPredicted RBP22.78■■□□□ 1.24
SLC6A1-202ENST00000425938 ZNF526Q8TF50 670 aaPredicted RBP22.78■■□□□ 1.24
SLC6A1-202ENST00000425938 BRIP1Q9BX63 1249 aa22.78■■□□□ 1.24
SLC6A1-202ENST00000425938 NIP7Q9Y221 180 aaKnown RBP eCLIP22.78■■□□□ 1.24
SLC6A1-202ENST00000425938 MAP3K15Q6ZN16 1313 aa22.78■■□□□ 1.24
SLC6A1-202ENST00000425938 ERVV-1B6SEH8 477 aa22.77■■□□□ 1.24
SLC6A1-202ENST00000425938 HLFQ16534 295 aa22.76■■□□□ 1.23
SLC6A1-202ENST00000425938 GNAI1P63096 354 aa22.75■■□□□ 1.23
SLC6A1-202ENST00000425938 TTLL7Q6ZT98 887 aa22.75■■□□□ 1.23
SLC6A1-202ENST00000425938 CCDC24Q8N4L8 307 aa22.75■■□□□ 1.23
SLC6A1-202ENST00000425938 IFT57Q9NWB7 429 aa22.75■■□□□ 1.23
SLC6A1-202ENST00000425938 HOXB7P09629 217 aa22.74■■□□□ 1.23
SLC6A1-202ENST00000425938 KRT24Q2M2I5 525 aa22.74■■□□□ 1.23
SLC6A1-202ENST00000425938 TPTE2Q6XPS3 522 aa22.74■■□□□ 1.23
SLC6A1-202ENST00000425938 TTLL6Q8N841 843 aa22.74■■□□□ 1.23
SLC6A1-202ENST00000425938 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
SLC6A1-202ENST00000425938 NECTIN2Q92692 538 aa22.73■■□□□ 1.23
SLC6A1-202ENST00000425938 ZBTB3Q9H5J0 574 aa22.73■■□□□ 1.23
SLC6A1-202ENST00000425938 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
SLC6A1-202ENST00000425938 PDIA6Q15084 440 aa22.72■■□□□ 1.23
SLC6A1-202ENST00000425938 C9orf131Q5VYM1 1079 aa22.72■■□□□ 1.23
SLC6A1-202ENST00000425938 ZNF622Q969S3 477 aaKnown RBP eCLIP22.72■■□□□ 1.23
SLC6A1-202ENST00000425938 FAM177BA6PVY3 158 aa22.71■■□□□ 1.23
SLC6A1-202ENST00000425938 GTF2E1P29083 439 aaPredicted RBP22.71■■□□□ 1.23
SLC6A1-202ENST00000425938 PROSER3Q2NL68 480 aa22.71■■□□□ 1.23
SLC6A1-202ENST00000425938 HDGFL1Q5TGJ6 251 aa22.71■■□□□ 1.23
SLC6A1-202ENST00000425938 DDX21Q9NR30 783 aaKnown RBP eCLIP22.71■■□□□ 1.23
SLC6A1-202ENST00000425938 COL11A2P13942 1736 aaPredicted RBP22.71■■□□□ 1.23
SLC6A1-202ENST00000425938 ANXA1P04083 346 aa22.7■■□□□ 1.22
SLC6A1-202ENST00000425938 LRP10Q7Z4F1 713 aa22.7■■□□□ 1.22
SLC6A1-202ENST00000425938 NYXQ9GZU5 481 aa22.7■■□□□ 1.22
SLC6A1-202ENST00000425938 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
SLC6A1-202ENST00000425938 CCDC27Q2M243 656 aa22.69■■□□□ 1.22
SLC6A1-202ENST00000425938 DUSP27Q5VZP5 1158 aa22.69■■□□□ 1.22
SLC6A1-202ENST00000425938 GIGYF2Q6Y7W6 1299 aaKnown RBP22.69■■□□□ 1.22
SLC6A1-202ENST00000425938 RNF181Q9P0P0 153 aa22.68■■□□□ 1.22
SLC6A1-202ENST00000425938 CACNA1SQ13698 1873 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 GPTP24298 496 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 AIMP1Q12904 312 aaKnown RBP22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 STYK1Q6J9G0 422 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 COPS6Q7L5N1 327 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 XAGE3Q8WTP9 111 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 CNKSR1Q969H4 720 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 MASTLQ96GX5 879 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 CHPF2Q9P2E5 772 aa22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 DBF4Q9UBU7 674 aaPredicted RBP22.67■■□□□ 1.22
SLC6A1-202ENST00000425938 KIF3CO14782 793 aa22.66■■□□□ 1.22
SLC6A1-202ENST00000425938 SRGNP10124 158 aa22.66■■□□□ 1.22
SLC6A1-202ENST00000425938 NCBP3Q53F19 620 aaKnown RBP22.66■■□□□ 1.22
SLC6A1-202ENST00000425938 SBF1O95248 1867 aa22.66■■□□□ 1.22
SLC6A1-202ENST00000425938 IBTKQ9P2D0 1353 aaPredicted RBP22.65■■□□□ 1.22
SLC6A1-202ENST00000425938 HSP90AB3PQ58FF7 597 aa22.65■■□□□ 1.22
SLC6A1-202ENST00000425938 WWC1Q8IX03 1113 aa22.65■■□□□ 1.22
SLC6A1-202ENST00000425938 ZNF34Q8IZ26 560 aa22.65■■□□□ 1.22
SLC6A1-202ENST00000425938 ANKRD36CQ5JPF3 1778 aa22.64■■□□□ 1.22
SLC6A1-202ENST00000425938 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
SLC6A1-202ENST00000425938 CHMP4AQ9BY43 222 aa22.64■■□□□ 1.21
SLC6A1-202ENST00000425938 ARFGEF2Q9Y6D5 1785 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 UBN2Q6ZU65 1347 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 NPR1P16066 1061 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 LMNB1P20700 586 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 RASSF7Q02833 373 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 PPP1R42Q7Z4L9 355 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 FAM9BQ8IZU0 186 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 HYPKQ9NX55 129 aa22.63■■□□□ 1.21
SLC6A1-202ENST00000425938 ZC3H4Q9UPT8 1303 aaKnown RBP22.62■■□□□ 1.21
SLC6A1-202ENST00000425938 SLX4Q8IY92 1834 aa22.62■■□□□ 1.21
SLC6A1-202ENST00000425938 KLRG2A4D1S0 409 aaPredicted RBP22.62■■□□□ 1.21
SLC6A1-202ENST00000425938 ELL2O00472 640 aaPredicted RBP22.62■■□□□ 1.21
SLC6A1-202ENST00000425938 SUSD4Q5VX71 490 aa22.62■■□□□ 1.21
SLC6A1-202ENST00000425938 NUTM1Q86Y26 1132 aa22.62■■□□□ 1.21
SLC6A1-202ENST00000425938 KDM2BQ8NHM5 1336 aa22.61■■□□□ 1.21
SLC6A1-202ENST00000425938 C21orf2O43822 256 aa22.61■■□□□ 1.21
SLC6A1-202ENST00000425938 CCDC88AQ3V6T2 1871 aa22.61■■□□□ 1.21
SLC6A1-202ENST00000425938 PRPF40BQ6NWY9 871 aaKnown RBP22.61■■□□□ 1.21
SLC6A1-202ENST00000425938 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
SLC6A1-202ENST00000425938 IL16Q14005 1332 aa22.6■■□□□ 1.21
SLC6A1-202ENST00000425938 ERFEQ4G0M1 354 aa22.6■■□□□ 1.21
SLC6A1-202ENST00000425938 C8orf58Q8NAV2 365 aa22.6■■□□□ 1.21
SLC6A1-202ENST00000425938 NMRK2Q9NPI5 230 aa22.6■■□□□ 1.21
SLC6A1-202ENST00000425938 ZNF219Q9P2Y4 722 aaPredicted RBP22.6■■□□□ 1.21
SLC6A1-202ENST00000425938 NFKBIEO00221 500 aa22.59■■□□□ 1.21
SLC6A1-202ENST00000425938 SOGA3Q5TF21 947 aa22.59■■□□□ 1.21
SLC6A1-202ENST00000425938 PLBD2Q8NHP8 589 aa22.59■■□□□ 1.21
SLC6A1-202ENST00000425938 TSR2Q969E8 191 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms