RNA–Protein interactions for RNA: ENST00000425388.1

LINC00501-201, long intergenic non-protein coding RNA 501, humanhuman

TSL 2 BASIC

Gene LINC00501, Length 2,046 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00501-201ENST00000425388 SSR1P43307 286 aaKnown RBP9.66□□□□□ -0.86
LINC00501-201ENST00000425388 PLA2G4AP47712 749 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 FOSBP53539 338 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 NAA30Q147X3 362 aaPredicted RBP9.66□□□□□ -0.86
LINC00501-201ENST00000425388 ELF2Q15723 593 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 CCDC181Q5TID7 509 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 MMS22LQ6ZRQ5 1243 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 FILIP1Q7Z7B0 1213 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 TXNDC2Q86VQ3 553 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 UBXN6Q9BZV1 441 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 USTQ9Y2C2 406 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 DMRT2Q9Y5R5 561 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 POGZQ7Z3K3 1410 aa9.66□□□□□ -0.86
LINC00501-201ENST00000425388 CYB5RLQ6IPT4 315 aa9.65□□□□□ -0.86
LINC00501-201ENST00000425388 TMCO3Q6UWJ1 677 aa9.65□□□□□ -0.86
LINC00501-201ENST00000425388 ZGPATQ8N5A5 531 aaKnown RBP9.65□□□□□ -0.86
LINC00501-201ENST00000425388 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC00501-201ENST00000425388 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
LINC00501-201ENST00000425388 FUCA2Q9BTY2 467 aa9.65□□□□□ -0.86
LINC00501-201ENST00000425388 IQSEC2Q5JU85 1478 aa9.65□□□□□ -0.86
LINC00501-201ENST00000425388 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
LINC00501-201ENST00000425388 PEX14O75381 377 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 RPS6KA5O75582 802 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 TPM1P09493 284 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 PTGS1P23219 599 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 ACTN2P35609 894 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 USP8P40818 1118 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 TSGA10IPQ3SY00 556 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 LRCH2Q5VUJ6 765 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 GTF3C6Q969F1 213 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 LNPKQ9C0E8 428 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 KCND1Q9NSA2 647 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 LCMT1Q9UIC8 334 aa9.65□□□□□ -0.87
LINC00501-201ENST00000425388 POLR3AO14802 1390 aaPredicted RBP9.65□□□□□ -0.87
LINC00501-201ENST00000425388 CCDC189A1A4V9 331 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 ZRANB2O95218 330 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC00501-201ENST00000425388 PTPN14Q15678 1187 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 NBPF9Q3BBW0 867 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 LEKR1Q6ZMV7 388 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 PACS2Q86VP3 889 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 AFAP1Q8N556 730 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 SMARCE1Q969G3 411 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 ZBTB40Q9NUA8 1239 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 MAGEC2Q9UBF1 373 aaPredicted RBP9.64□□□□□ -0.87
LINC00501-201ENST00000425388 TNNQ9UQP3 1299 aa9.64□□□□□ -0.87
LINC00501-201ENST00000425388 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 UBE2HP62256 183 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 ZRSR1Q15695 479 aaKnown RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 CASC1Q6TDU7 716 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 NYAP1Q6ZVC0 841 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 SPC24Q8NBT2 197 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 RNF17Q9BXT8 1623 aaKnown RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 WDR33Q9C0J8 1336 aaKnown RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 CCDC192P0DO97 292 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 HOXD11P31277 338 aaPredicted RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 CLCN6P51797 869 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 CUL4AQ13619 759 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 SKIV2LQ15477 1246 aaKnown RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 E2F4Q16254 413 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 LONRF3Q496Y0 759 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 INTS3Q68E01 1043 aaKnown RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 ZSCAN25Q6NSZ9 544 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 FAM200AQ8TCP9 573 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 L2HGDHQ9H9P8 463 aa9.63□□□□□ -0.87
LINC00501-201ENST00000425388 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
LINC00501-201ENST00000425388 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
LINC00501-201ENST00000425388 LIG1P18858 919 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 CDC25BP30305 580 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 ZC3H6P61129 1189 aaKnown RBP9.62□□□□□ -0.87
LINC00501-201ENST00000425388 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
LINC00501-201ENST00000425388 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 CCDC186Q7Z3E2 898 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 USP48Q86UV5 1035 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 ITPRIPQ8IWB1 547 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 EFCAB13Q8IY85 973 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 JMYQ8N9B5 988 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 TBC1D22AQ8WUA7 517 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 RUNDC1Q96C34 613 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 CDCA7Q9BWT1 371 aaPredicted RBP9.62□□□□□ -0.87
LINC00501-201ENST00000425388 FAM107BQ9H098 131 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 METTL14Q9HCE5 456 aaKnown RBP9.62□□□□□ -0.87
LINC00501-201ENST00000425388 VWDEQ8N2E2 1590 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 DIP2BQ9P265 1576 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 KIDINS220Q9ULH0 1771 aa9.62□□□□□ -0.87
LINC00501-201ENST00000425388 PPFIA4O75335 1185 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 ZKSCAN8Q15776 578 aaPredicted RBP9.61□□□□□ -0.87
LINC00501-201ENST00000425388 RNF217Q8TC41 542 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 EVI5LQ96CN4 794 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 HECW2Q9P2P5 1572 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 MYOM2P54296 1465 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 ERBB3P21860 1342 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 IPO8O15397 1037 aaKnown RBP9.61□□□□□ -0.87
LINC00501-201ENST00000425388 CORO7P57737 925 aa9.61□□□□□ -0.87
LINC00501-201ENST00000425388 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
LINC00501-201ENST00000425388 SF3A1Q15459 793 aaKnown RBP9.61□□□□□ -0.87
LINC00501-201ENST00000425388 C11orf91Q3C1V1 193 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms