RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 TSPYL6Q8N831 410 aa24.2■■□□□ 1.46
MCF2L-214ENST00000423251 HNRNPUQ00839 825 aaKnown RBP eCLIP24.19■■□□□ 1.46
MCF2L-214ENST00000423251 SLFN5Q08AF3 891 aa24.19■■□□□ 1.46
MCF2L-214ENST00000423251 USPL1Q5W0Q7 1092 aa24.19■■□□□ 1.46
MCF2L-214ENST00000423251 NECTIN2Q92692 538 aa24.19■■□□□ 1.46
MCF2L-214ENST00000423251 DDX21Q9NR30 783 aaKnown RBP eCLIP24.19■■□□□ 1.46
MCF2L-214ENST00000423251 TBC1D2BQ9UPU7 963 aa24.19■■□□□ 1.46
MCF2L-214ENST00000423251 A0A0G2JLW4 131 aa24.18■■□□□ 1.46
MCF2L-214ENST00000423251 MYL6BP14649 208 aa24.18■■□□□ 1.46
MCF2L-214ENST00000423251 TWISTNBQ3B726 338 aaPredicted RBP24.18■■□□□ 1.46
MCF2L-214ENST00000423251 DZIP3Q86Y13 1208 aaKnown RBP24.18■■□□□ 1.46
MCF2L-214ENST00000423251 DBF4Q9UBU7 674 aaPredicted RBP24.18■■□□□ 1.46
MCF2L-214ENST00000423251 TGFB2P61812 414 aa24.17■■□□□ 1.46
MCF2L-214ENST00000423251 EXOSC9Q06265 439 aaKnown RBP24.17■■□□□ 1.46
MCF2L-214ENST00000423251 LRP10Q7Z4F1 713 aa24.17■■□□□ 1.46
MCF2L-214ENST00000423251 BCS1LQ9Y276 419 aa24.17■■□□□ 1.46
MCF2L-214ENST00000423251 PARP3Q9Y6F1 533 aa24.17■■□□□ 1.46
MCF2L-214ENST00000423251 RGL2O15211 777 aa24.16■■□□□ 1.46
MCF2L-214ENST00000423251 FKBP8Q14318 412 aa24.16■■□□□ 1.46
MCF2L-214ENST00000423251 CCDC30Q5VVM6 783 aa24.16■■□□□ 1.46
MCF2L-214ENST00000423251 BCL2L12Q9HB09 334 aa24.16■■□□□ 1.46
MCF2L-214ENST00000423251 CAMTA2O94983 1202 aa24.15■■□□□ 1.46
MCF2L-214ENST00000423251 DPEP1P16444 411 aa24.15■■□□□ 1.46
MCF2L-214ENST00000423251 PROSER3Q2NL68 480 aa24.15■■□□□ 1.46
MCF2L-214ENST00000423251 TRMT2AQ8IZ69 625 aaKnown RBP24.15■■□□□ 1.46
MCF2L-214ENST00000423251 CHPF2Q9P2E5 772 aa24.15■■□□□ 1.46
MCF2L-214ENST00000423251 CEP350Q5VT06 3117 aa24.14■■□□□ 1.46
MCF2L-214ENST00000423251 VAMP4O75379 141 aa24.14■■□□□ 1.45
MCF2L-214ENST00000423251 CLEC4GQ6UXB4 293 aa24.14■■□□□ 1.45
MCF2L-214ENST00000423251 CDCA7LQ96GN5 454 aa24.14■■□□□ 1.45
MCF2L-214ENST00000423251 ARFGEF1Q9Y6D6 1849 aa24.13■■□□□ 1.45
MCF2L-214ENST00000423251 ERVV-1B6SEH8 477 aa24.13■■□□□ 1.45
MCF2L-214ENST00000423251 ANXA1P04083 346 aa24.13■■□□□ 1.45
MCF2L-214ENST00000423251 TM4SF1P30408 202 aa24.13■■□□□ 1.45
MCF2L-214ENST00000423251 HYPKQ9NX55 129 aa24.13■■□□□ 1.45
MCF2L-214ENST00000423251 DDR1Q08345 913 aa24.11■■□□□ 1.45
MCF2L-214ENST00000423251 KIF6Q6ZMV9 814 aa24.11■■□□□ 1.45
MCF2L-214ENST00000423251 TTLL7Q6ZT98 887 aa24.11■■□□□ 1.45
MCF2L-214ENST00000423251 COPS6Q7L5N1 327 aa24.11■■□□□ 1.45
MCF2L-214ENST00000423251 ZNF652Q9Y2D9 606 aa24.11■■□□□ 1.45
MCF2L-214ENST00000423251 MAP3K15Q6ZN16 1313 aa24.1■■□□□ 1.45
MCF2L-214ENST00000423251 KIF3CO14782 793 aa24.09■■□□□ 1.45
MCF2L-214ENST00000423251 NFIXQ14938 502 aa24.09■■□□□ 1.45
MCF2L-214ENST00000423251 ARHGAP27Q6ZUM4 889 aa24.09■■□□□ 1.45
MCF2L-214ENST00000423251 XAGE3Q8WTP9 111 aa24.09■■□□□ 1.45
MCF2L-214ENST00000423251 STK31Q9BXU1 1019 aa24.09■■□□□ 1.45
MCF2L-214ENST00000423251 ZBED9Q6R2W3 1325 aa24.08■■□□□ 1.44
MCF2L-214ENST00000423251 KCNA3P22001 575 aa24.07■■□□□ 1.44
MCF2L-214ENST00000423251 AIMP1Q12904 312 aaKnown RBP24.07■■□□□ 1.44
MCF2L-214ENST00000423251 TBC1D9BQ66K14 1250 aa24.07■■□□□ 1.44
MCF2L-214ENST00000423251 AFDNP55196 1824 aaKnown RBP24.06■■□□□ 1.44
MCF2L-214ENST00000423251 POLRMTO00411 1230 aaKnown RBP24.06■■□□□ 1.44
MCF2L-214ENST00000423251 HSPA6P17066 643 aa24.06■■□□□ 1.44
MCF2L-214ENST00000423251 HLFQ16534 295 aa24.06■■□□□ 1.44
MCF2L-214ENST00000423251 SETDB2Q96T68 719 aa24.05■■□□□ 1.44
MCF2L-214ENST00000423251 ZBTB3Q9H5J0 574 aa24.05■■□□□ 1.44
MCF2L-214ENST00000423251 SCN7AQ01118 1682 aa24.05■■□□□ 1.44
MCF2L-214ENST00000423251 SLC4A2P04920 1241 aa24.04■■□□□ 1.44
MCF2L-214ENST00000423251 GIGYF2Q6Y7W6 1299 aaKnown RBP24.04■■□□□ 1.44
MCF2L-214ENST00000423251 BICDL1Q6ZP65 573 aa24.04■■□□□ 1.44
MCF2L-214ENST00000423251 ANKRD13DQ6ZTN6 518 aa24.04■■□□□ 1.44
MCF2L-214ENST00000423251 PHAXQ9H814 394 aaKnown RBP24.04■■□□□ 1.44
MCF2L-214ENST00000423251 BCORQ6W2J9 1755 aa24.03■■□□□ 1.44
MCF2L-214ENST00000423251 TCERG1O14776 1098 aaKnown RBP24.03■■□□□ 1.44
MCF2L-214ENST00000423251 CHRNA5P30532 468 aa24.03■■□□□ 1.44
MCF2L-214ENST00000423251 PLBD2Q8NHP8 589 aa24.03■■□□□ 1.44
MCF2L-214ENST00000423251 ZNF428Q96B54 188 aa24.03■■□□□ 1.44
MCF2L-214ENST00000423251 PIM2Q9P1W9 311 aa24.03■■□□□ 1.44
MCF2L-214ENST00000423251 SERPINB2P05120 415 aa24.02■■□□□ 1.44
MCF2L-214ENST00000423251 CT47B1P0C2W7 299 aaPredicted RBP24.02■■□□□ 1.44
MCF2L-214ENST00000423251 NRXN2Q9P2S2 1712 aa24.01■■□□□ 1.43
MCF2L-214ENST00000423251 NIP7Q9Y221 180 aaKnown RBP eCLIP24.01■■□□□ 1.43
MCF2L-214ENST00000423251 DDX58O95786 925 aaKnown RBP24■■□□□ 1.43
MCF2L-214ENST00000423251 HSP90AB3PQ58FF7 597 aa24■■□□□ 1.43
MCF2L-214ENST00000423251 DALRD3Q5D0E6 543 aaKnown RBP24■■□□□ 1.43
MCF2L-214ENST00000423251 ZNF34Q8IZ26 560 aa24■■□□□ 1.43
MCF2L-214ENST00000423251 CARMIL3Q8ND23 1372 aa24■■□□□ 1.43
MCF2L-214ENST00000423251 TCIRG1Q13488 830 aa23.99■■□□□ 1.43
MCF2L-214ENST00000423251 C9orf131Q5VYM1 1079 aa23.99■■□□□ 1.43
MCF2L-214ENST00000423251 NMRK2Q9NPI5 230 aa23.99■■□□□ 1.43
MCF2L-214ENST00000423251 DLEC1Q9Y238 1755 aa23.98■■□□□ 1.43
MCF2L-214ENST00000423251 RIC3Q7Z5B4 369 aa23.98■■□□□ 1.43
MCF2L-214ENST00000423251 NUP98P52948 1817 aa23.98■■□□□ 1.43
MCF2L-214ENST00000423251 SBF1O95248 1867 aa23.98■■□□□ 1.43
MCF2L-214ENST00000423251 CACNA1FO60840 1977 aa23.98■■□□□ 1.43
MCF2L-214ENST00000423251 G2E3Q7L622 706 aa23.97■■□□□ 1.43
MCF2L-214ENST00000423251 FLIIQ13045 1269 aa23.96■■□□□ 1.43
MCF2L-214ENST00000423251 KSR2Q6VAB6 950 aa23.96■■□□□ 1.43
MCF2L-214ENST00000423251 TPTE2Q6XPS3 522 aa23.96■■□□□ 1.43
MCF2L-214ENST00000423251 ALDH1L2Q3SY69 923 aa23.95■■□□□ 1.42
MCF2L-214ENST00000423251 PARP10Q53GL7 1025 aa23.95■■□□□ 1.42
MCF2L-214ENST00000423251 NBPF5PQ86XG9 351 aaPredicted RBP23.95■■□□□ 1.42
MCF2L-214ENST00000423251 GPTP24298 496 aa23.94■■□□□ 1.42
MCF2L-214ENST00000423251 RNF181Q9P0P0 153 aa23.94■■□□□ 1.42
MCF2L-214ENST00000423251 PI4KAP2A4QPH2 592 aa23.93■■□□□ 1.42
MCF2L-214ENST00000423251 TOMM70O94826 608 aa23.93■■□□□ 1.42
MCF2L-214ENST00000423251 TRIM28Q13263 835 aaKnown RBP23.93■■□□□ 1.42
MCF2L-214ENST00000423251 PRR5LQ6MZQ0 368 aa23.93■■□□□ 1.42
MCF2L-214ENST00000423251 PI4KAP1Q8N8J0 262 aa23.93■■□□□ 1.42
MCF2L-214ENST00000423251 CNBD1Q8NA66 436 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms