RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 INTS5Q6P9B9 1019 aaKnown RBP3.17□□□□□ -1.9
UBE2W-202ENST00000422906 SMG1Q96Q15 3661 aaKnown RBP3.17□□□□□ -1.9
UBE2W-202ENST00000422906 NLRC5Q86WI3 1866 aa3.17□□□□□ -1.9
UBE2W-202ENST00000422906 RGL3Q3MIN7 710 aa3.17□□□□□ -1.9
UBE2W-202ENST00000422906 PRAM1Q96QH2 718 aa3.17□□□□□ -1.9
UBE2W-202ENST00000422906 FZD9O00144 591 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 BMP8BP34820 402 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 ESCO1Q5FWF5 840 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 CST9Q5W186 159 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 PALLDQ8WX93 1383 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 MAP2K2P36507 400 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 C1QTNF1Q9BXJ1 281 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 COL25A1Q9BXS0 654 aaPredicted RBP3.16□□□□□ -1.9
UBE2W-202ENST00000422906 TNRC6BQ9UPQ9 1833 aaKnown RBP3.16□□□□□ -1.9
UBE2W-202ENST00000422906 GYS1P13807 737 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 POLD1P28340 1107 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 GPR162Q16538 588 aa3.16□□□□□ -1.9
UBE2W-202ENST00000422906 NUDT16Q96DE0 195 aaKnown RBP3.16□□□□□ -1.9
UBE2W-202ENST00000422906 CYP27B1O15528 508 aa3.15□□□□□ -1.9
UBE2W-202ENST00000422906 KRTAP21-3Q3LHN1 58 aa3.15□□□□□ -1.9
UBE2W-202ENST00000422906 CFAP70Q5T0N1 1121 aa3.15□□□□□ -1.9
UBE2W-202ENST00000422906 FARP1Q9Y4F1 1045 aaPredicted RBP3.15□□□□□ -1.9
UBE2W-202ENST00000422906 SOS1Q07889 1333 aaPredicted RBP3.15□□□□□ -1.9
UBE2W-202ENST00000422906 ITGB8P26012 769 aa3.15□□□□□ -1.91
UBE2W-202ENST00000422906 C16orf71Q8IYS4 520 aaPredicted RBP3.15□□□□□ -1.91
UBE2W-202ENST00000422906 RTFDC1Q9BY42 306 aaPredicted RBP3.15□□□□□ -1.91
UBE2W-202ENST00000422906 USP42Q9H9J4 1324 aaKnown RBP3.15□□□□□ -1.91
UBE2W-202ENST00000422906 COL27A1Q8IZC6 1860 aaPredicted RBP3.15□□□□□ -1.91
UBE2W-202ENST00000422906 VPS13AQ96RL7 3174 aa3.15□□□□□ -1.91
UBE2W-202ENST00000422906 ZBTB7AO95365 584 aa3.15□□□□□ -1.91
UBE2W-202ENST00000422906 INTS3Q68E01 1043 aaKnown RBP3.15□□□□□ -1.91
UBE2W-202ENST00000422906 NMRK2Q9NPI5 230 aa3.15□□□□□ -1.91
UBE2W-202ENST00000422906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.15□□□□□ -1.91
UBE2W-202ENST00000422906 CRY2Q49AN0 593 aa3.14□□□□□ -1.91
UBE2W-202ENST00000422906 MCOLN1Q9GZU1 580 aa3.14□□□□□ -1.91
UBE2W-202ENST00000422906 TLL2Q9Y6L7 1015 aa3.14□□□□□ -1.91
UBE2W-202ENST00000422906 MYO5AQ9Y4I1 1855 aaKnown RBP3.14□□□□□ -1.91
UBE2W-202ENST00000422906 XPCQ01831 940 aaPredicted RBP3.13□□□□□ -1.91
UBE2W-202ENST00000422906 IP6K1Q92551 441 aa3.13□□□□□ -1.91
UBE2W-202ENST00000422906 ZBED3Q96IU2 234 aaPredicted RBP3.13□□□□□ -1.91
UBE2W-202ENST00000422906 GLTPD2A6NH11 291 aa3.13□□□□□ -1.91
UBE2W-202ENST00000422906 IRX5P78411 483 aaPredicted RBP3.13□□□□□ -1.91
UBE2W-202ENST00000422906 RFX7Q2KHR2 1363 aa3.13□□□□□ -1.91
UBE2W-202ENST00000422906 ECE1P42892 770 aa3.13□□□□□ -1.91
UBE2W-202ENST00000422906 KIF12Q96FN5 646 aa3.13□□□□□ -1.91
UBE2W-202ENST00000422906 RAB3GAP2Q9H2M9 1393 aa3.13□□□□□ -1.91
UBE2W-202ENST00000422906 TMEM132EQ6IEE7 984 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 ACAP1Q15027 740 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 C5orf42Q9H799 3197 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 TMEM265A0A087WTH1 108 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 TESPA1A2RU30 521 aaPredicted RBP3.12□□□□□ -1.91
UBE2W-202ENST00000422906 SPDYE4A6NLX3 237 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 BRPF1P55201 1214 aaPredicted RBP3.12□□□□□ -1.91
UBE2W-202ENST00000422906 HTRA3P83110 453 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 FLAD1Q8NFF5 587 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 SHISA4Q96DD7 197 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 WASHC2AQ641Q2 1341 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 TNFRSF10AO00220 468 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 ATMINO43313 823 aaPredicted RBP3.12□□□□□ -1.91
UBE2W-202ENST00000422906 HCN4Q9Y3Q4 1203 aa3.12□□□□□ -1.91
UBE2W-202ENST00000422906 ZNFX1Q9P2E3 1918 aaKnown RBP3.11□□□□□ -1.91
UBE2W-202ENST00000422906 GABBR2O75899 941 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 VEGFBP49765 207 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 SRPK2P78362 688 aaKnown RBP3.11□□□□□ -1.91
UBE2W-202ENST00000422906 MPHOSPH9Q99550 1183 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 DNAH3Q8TD57 4116 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 HOXC9P31274 260 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 ATG3Q9NT62 314 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 TIE1P35590 1138 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 HAP1P54257 671 aaPredicted RBP3.11□□□□□ -1.91
UBE2W-202ENST00000422906 CDK19Q9BWU1 502 aa3.11□□□□□ -1.91
UBE2W-202ENST00000422906 ST18O60284 1047 aa3.1□□□□□ -1.91
UBE2W-202ENST00000422906 MAMSTRQ6ZN01 415 aa3.1□□□□□ -1.91
UBE2W-202ENST00000422906 CCDC85CA6NKD9 419 aa3.1□□□□□ -1.91
UBE2W-202ENST00000422906 SCNN1DP51172 638 aa3.1□□□□□ -1.91
UBE2W-202ENST00000422906 CDHR2Q9BYE9 1310 aa3.1□□□□□ -1.91
UBE2W-202ENST00000422906 KCTD2Q14681 263 aa3.1□□□□□ -1.91
UBE2W-202ENST00000422906 TRPM4Q8TD43 1214 aa3.1□□□□□ -1.91
UBE2W-202ENST00000422906 SH3TC1Q8TE82 1336 aa3.09□□□□□ -1.91
UBE2W-202ENST00000422906 COL15A1P39059 1388 aa3.09□□□□□ -1.91
UBE2W-202ENST00000422906 A0A0G2JS52 829 aa3.09□□□□□ -1.91
UBE2W-202ENST00000422906 CHRNA2Q15822 529 aa3.09□□□□□ -1.91
UBE2W-202ENST00000422906 PIGBQ92521 554 aa3.09□□□□□ -1.91
UBE2W-202ENST00000422906 FRYLO94915 3013 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 ATRNL1Q5VV63 1379 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 LBX1P52954 281 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 CDAN1Q8IWY9 1227 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 ARMC5Q96C12 935 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 PRRX2Q99811 253 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 IRF2BPLQ9H1B7 796 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 DACH1Q9UI36 760 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 ZNF541Q9H0D2 1346 aa3.09□□□□□ -1.92
UBE2W-202ENST00000422906 POTEB2H3BUK9 544 aa3.08□□□□□ -1.92
UBE2W-202ENST00000422906 ABCB7O75027 752 aa3.08□□□□□ -1.92
UBE2W-202ENST00000422906 DDB1Q16531 1140 aa3.08□□□□□ -1.92
UBE2W-202ENST00000422906 NBEAQ8NFP9 2946 aa3.08□□□□□ -1.92
UBE2W-202ENST00000422906 TSC2P49815 1807 aa3.08□□□□□ -1.92
UBE2W-202ENST00000422906 CHADLQ6NUI6 762 aa3.08□□□□□ -1.92
UBE2W-202ENST00000422906 FLT4P35916 1363 aa3.08□□□□□ -1.92
UBE2W-202ENST00000422906 WDR81Q562E7 1941 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms