RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
HERC3-204ENST00000422770 TM4SF1P30408 202 aa12.52□□□□□ -0.41
HERC3-204ENST00000422770 AIMP1Q12904 312 aaKnown RBP12.52□□□□□ -0.41
HERC3-204ENST00000422770 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
HERC3-204ENST00000422770 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.41
HERC3-204ENST00000422770 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
HERC3-204ENST00000422770 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 A0A0G2JLW4 131 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 CCDC27Q2M243 656 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 TTLL7Q6ZT98 887 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 CCDC24Q8N4L8 307 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 CHPF2Q9P2E5 772 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
HERC3-204ENST00000422770 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 PXDNLA1KZ92 1463 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
HERC3-204ENST00000422770 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
HERC3-204ENST00000422770 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
HERC3-204ENST00000422770 CNBD1Q8NA66 436 aa12.5□□□□□ -0.41
HERC3-204ENST00000422770 ARFGEF2Q9Y6D5 1785 aa12.5□□□□□ -0.41
HERC3-204ENST00000422770 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
HERC3-204ENST00000422770 MAP3K15Q6ZN16 1313 aa12.49□□□□□ -0.41
HERC3-204ENST00000422770 DPEP1P16444 411 aa12.49□□□□□ -0.41
HERC3-204ENST00000422770 GPTP24298 496 aa12.49□□□□□ -0.41
HERC3-204ENST00000422770 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
HERC3-204ENST00000422770 ST5P78524 1137 aa12.49□□□□□ -0.41
HERC3-204ENST00000422770 HLFQ16534 295 aa12.49□□□□□ -0.41
HERC3-204ENST00000422770 NBPF5PQ86XG9 351 aaPredicted RBP12.49□□□□□ -0.41
HERC3-204ENST00000422770 XAGE3Q8WTP9 111 aa12.49□□□□□ -0.41
HERC3-204ENST00000422770 BCS1LQ9Y276 419 aa12.49□□□□□ -0.41
HERC3-204ENST00000422770 HOXB7P09629 217 aa12.48□□□□□ -0.41
HERC3-204ENST00000422770 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
HERC3-204ENST00000422770 CHRNA5P30532 468 aa12.48□□□□□ -0.41
HERC3-204ENST00000422770 TGFB2P61812 414 aa12.48□□□□□ -0.41
HERC3-204ENST00000422770 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
HERC3-204ENST00000422770 C8orf58Q8NAV2 365 aa12.48□□□□□ -0.41
HERC3-204ENST00000422770 DDX21Q9NR30 783 aaKnown RBP eCLIP12.48□□□□□ -0.413e-6■■■□□ 18.6
HERC3-204ENST00000422770 DBF4Q9UBU7 674 aaPredicted RBP12.48□□□□□ -0.41
HERC3-204ENST00000422770 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
HERC3-204ENST00000422770 UTRNP46939 3433 aa12.47□□□□□ -0.41
HERC3-204ENST00000422770 IL16Q14005 1332 aa12.47□□□□□ -0.41
HERC3-204ENST00000422770 FANCIQ9NVI1 1328 aa12.47□□□□□ -0.41
HERC3-204ENST00000422770 TCERG1O14776 1098 aaKnown RBP12.47□□□□□ -0.41
HERC3-204ENST00000422770 PDIA6Q15084 440 aa12.47□□□□□ -0.41
HERC3-204ENST00000422770 COPS6Q7L5N1 327 aa12.47□□□□□ -0.41
HERC3-204ENST00000422770 WDR63Q8IWG1 891 aa12.47□□□□□ -0.41
HERC3-204ENST00000422770 ERVV-1B6SEH8 477 aa12.46□□□□□ -0.41
HERC3-204ENST00000422770 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
HERC3-204ENST00000422770 CCDC30Q5VVM6 783 aa12.46□□□□□ -0.41
HERC3-204ENST00000422770 PRR5LQ6MZQ0 368 aa12.46□□□□□ -0.41
HERC3-204ENST00000422770 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
HERC3-204ENST00000422770 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
HERC3-204ENST00000422770 STK31Q9BXU1 1019 aa12.46□□□□□ -0.41
HERC3-204ENST00000422770 MYH16Q9H6N6 1097 aa12.46□□□□□ -0.41
HERC3-204ENST00000422770 H0YIN7 160 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 GRIN3BO60391 1043 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 TPTE2Q6XPS3 522 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 ZNF622Q969S3 477 aaKnown RBP eCLIP12.45□□□□□ -0.42
HERC3-204ENST00000422770 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
HERC3-204ENST00000422770 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
HERC3-204ENST00000422770 PDE6BP35913 854 aa12.44□□□□□ -0.42
HERC3-204ENST00000422770 EXOSC9Q06265 439 aaKnown RBP12.44□□□□□ -0.42
HERC3-204ENST00000422770 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
HERC3-204ENST00000422770 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
HERC3-204ENST00000422770 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
HERC3-204ENST00000422770 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
HERC3-204ENST00000422770 NYXQ9GZU5 481 aa12.44□□□□□ -0.42
HERC3-204ENST00000422770 RIC3Q7Z5B4 369 aa12.43□□□□□ -0.42
HERC3-204ENST00000422770 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
HERC3-204ENST00000422770 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
HERC3-204ENST00000422770 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
HERC3-204ENST00000422770 LAMB2P55268 1798 aa12.43□□□□□ -0.42
HERC3-204ENST00000422770 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 RGL2O15211 777 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 HSP90AB3PQ58FF7 597 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 ARHGAP27Q6ZUM4 889 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 BRIP1Q9BX63 1249 aa12.42□□□□□ -0.42
HERC3-204ENST00000422770 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
HERC3-204ENST00000422770 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
HERC3-204ENST00000422770 ERFEQ4G0M1 354 aa12.41□□□□□ -0.42
HERC3-204ENST00000422770 PARP10Q53GL7 1025 aa12.41□□□□□ -0.42
HERC3-204ENST00000422770 SUSD4Q5VX71 490 aa12.41□□□□□ -0.42
HERC3-204ENST00000422770 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
HERC3-204ENST00000422770 ZBED9Q6R2W3 1325 aa12.4□□□□□ -0.42
HERC3-204ENST00000422770 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
HERC3-204ENST00000422770 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.42
HERC3-204ENST00000422770 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
HERC3-204ENST00000422770 KCNA3P22001 575 aa12.4□□□□□ -0.42
HERC3-204ENST00000422770 ZNF34Q8IZ26 560 aa12.4□□□□□ -0.42
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