RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 UTRNP46939 3433 aa27.8■■■□□ 2.04
FNDC3B-204ENST00000421757 AFDNP55196 1824 aaKnown RBP27.79■■■□□ 2.04
FNDC3B-204ENST00000421757 N4BP2Q86UW6 1770 aaPredicted RBP27.79■■■□□ 2.04
FNDC3B-204ENST00000421757 HOXB7P09629 217 aa27.79■■■□□ 2.04
FNDC3B-204ENST00000421757 PDIA6Q15084 440 aa27.79■■■□□ 2.04
FNDC3B-204ENST00000421757 HLFQ16534 295 aa27.79■■■□□ 2.04
FNDC3B-204ENST00000421757 NIP7Q9Y221 180 aaKnown RBP eCLIP27.79■■■□□ 2.04
FNDC3B-204ENST00000421757 MAP3K15Q6ZN16 1313 aa27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 ERVV-1B6SEH8 477 aa27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 RGL2O15211 777 aa27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 CHRNA5P30532 468 aa27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 PROSER3Q2NL68 480 aa27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 NCBP3Q53F19 620 aaKnown RBP27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 ZBTB3Q9H5J0 574 aa27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 BCS1LQ9Y276 419 aa27.78■■■□□ 2.04
FNDC3B-204ENST00000421757 ELL2O00472 640 aaPredicted RBP27.77■■■□□ 2.04
FNDC3B-204ENST00000421757 CNBD1Q8NA66 436 aa27.77■■■□□ 2.04
FNDC3B-204ENST00000421757 NRXN2Q9P2S2 1712 aa27.76■■■□□ 2.03
FNDC3B-204ENST00000421757 PRR5LQ6MZQ0 368 aa27.76■■■□□ 2.03
FNDC3B-204ENST00000421757 NBPF5PQ86XG9 351 aaPredicted RBP27.76■■■□□ 2.03
FNDC3B-204ENST00000421757 CCDC24Q8N4L8 307 aa27.76■■■□□ 2.03
FNDC3B-204ENST00000421757 DDX21Q9NR30 783 aaKnown RBP eCLIP27.76■■■□□ 2.03
FNDC3B-204ENST00000421757 PIM2Q9P1W9 311 aa27.76■■■□□ 2.03
FNDC3B-204ENST00000421757 KIAA1551Q9HCM1 1747 aa27.75■■■□□ 2.03
FNDC3B-204ENST00000421757 KCNA3P22001 575 aa27.75■■■□□ 2.03
FNDC3B-204ENST00000421757 ST5P78524 1137 aa27.75■■■□□ 2.03
FNDC3B-204ENST00000421757 AIMP1Q12904 312 aaKnown RBP27.75■■■□□ 2.03
FNDC3B-204ENST00000421757 TSR2Q969E8 191 aaKnown RBP27.75■■■□□ 2.03
FNDC3B-204ENST00000421757 CHPF2Q9P2E5 772 aa27.75■■■□□ 2.03
FNDC3B-204ENST00000421757 FAM177BA6PVY3 158 aa27.74■■■□□ 2.03
FNDC3B-204ENST00000421757 LRP10Q7Z4F1 713 aa27.74■■■□□ 2.03
FNDC3B-204ENST00000421757 COPS6Q7L5N1 327 aa27.73■■■□□ 2.03
FNDC3B-204ENST00000421757 DBF4Q9UBU7 674 aaPredicted RBP27.73■■■□□ 2.03
FNDC3B-204ENST00000421757 IL16Q14005 1332 aa27.72■■■□□ 2.03
FNDC3B-204ENST00000421757 C2CD5Q86YS7 1000 aa27.72■■■□□ 2.03
FNDC3B-204ENST00000421757 C8orf58Q8NAV2 365 aa27.72■■■□□ 2.03
FNDC3B-204ENST00000421757 XAGE3Q8WTP9 111 aa27.72■■■□□ 2.03
FNDC3B-204ENST00000421757 BRIP1Q9BX63 1249 aa27.72■■■□□ 2.03
FNDC3B-204ENST00000421757 H0YIN7 160 aa27.71■■■□□ 2.03
FNDC3B-204ENST00000421757 PDE6BP35913 854 aa27.71■■■□□ 2.03
FNDC3B-204ENST00000421757 TPTE2Q6XPS3 522 aa27.71■■■□□ 2.03
FNDC3B-204ENST00000421757 GPTP24298 496 aa27.7■■■□□ 2.02
FNDC3B-204ENST00000421757 GTF2E1P29083 439 aaPredicted RBP27.7■■■□□ 2.02
FNDC3B-204ENST00000421757 DALRD3Q5D0E6 543 aaKnown RBP27.7■■■□□ 2.02
FNDC3B-204ENST00000421757 GIGYF2Q6Y7W6 1299 aaKnown RBP27.7■■■□□ 2.02
FNDC3B-204ENST00000421757 WDR63Q8IWG1 891 aa27.7■■■□□ 2.02
FNDC3B-204ENST00000421757 CCER2I3L3R5 266 aa27.69■■■□□ 2.02
FNDC3B-204ENST00000421757 DIEXFQ68CQ4 756 aaKnown RBP27.69■■■□□ 2.02
FNDC3B-204ENST00000421757 ATP10DQ9P241 1426 aa27.67■■■□□ 2.02
FNDC3B-204ENST00000421757 CHMP4AQ9BY43 222 aa27.67■■■□□ 2.02
FNDC3B-204ENST00000421757 HYPKQ9NX55 129 aa27.67■■■□□ 2.02
FNDC3B-204ENST00000421757 PDZRN3Q9UPQ7 1066 aa27.67■■■□□ 2.02
FNDC3B-204ENST00000421757 TSPYL6Q8N831 410 aa27.66■■■□□ 2.02
FNDC3B-204ENST00000421757 NYXQ9GZU5 481 aa27.66■■■□□ 2.02
FNDC3B-204ENST00000421757 CHD4Q14839 1912 aa27.66■■■□□ 2.02
FNDC3B-204ENST00000421757 NUP98P52948 1817 aa27.65■■■□□ 2.02
FNDC3B-204ENST00000421757 ZNF622Q969S3 477 aaKnown RBP eCLIP27.65■■■□□ 2.021e-7■■□□□ 14.1
FNDC3B-204ENST00000421757 CCDC30Q5VVM6 783 aa27.64■■■□□ 2.02
FNDC3B-204ENST00000421757 ARHGAP27Q6ZUM4 889 aa27.64■■■□□ 2.02
FNDC3B-204ENST00000421757 ZNF34Q8IZ26 560 aa27.64■■■□□ 2.02
FNDC3B-204ENST00000421757 BRCA1P38398 1863 aaKnown RBP27.64■■■□□ 2.01
FNDC3B-204ENST00000421757 HSP90AB3PQ58FF7 597 aa27.63■■■□□ 2.01
FNDC3B-204ENST00000421757 TTLL6Q8N841 843 aa27.63■■■□□ 2.01
FNDC3B-204ENST00000421757 UBN2Q6ZU65 1347 aa27.63■■■□□ 2.01
FNDC3B-204ENST00000421757 FANCIQ9NVI1 1328 aa27.63■■■□□ 2.01
FNDC3B-204ENST00000421757 TWISTNBQ3B726 338 aaPredicted RBP27.62■■■□□ 2.01
FNDC3B-204ENST00000421757 NUTM1Q86Y26 1132 aa27.62■■■□□ 2.01
FNDC3B-204ENST00000421757 ANKRD31Q8N7Z5 1873 aa27.61■■■□□ 2.01
FNDC3B-204ENST00000421757 PARP10Q53GL7 1025 aa27.61■■■□□ 2.01
FNDC3B-204ENST00000421757 SUSD4Q5VX71 490 aa27.61■■■□□ 2.01
FNDC3B-204ENST00000421757 ANKRD13DQ6ZTN6 518 aa27.61■■■□□ 2.01
FNDC3B-204ENST00000421757 PPP1R42Q7Z4L9 355 aa27.61■■■□□ 2.01
FNDC3B-204ENST00000421757 GOLGA2Q08379 1002 aa27.6■■■□□ 2.01
FNDC3B-204ENST00000421757 PLBD2Q8NHP8 589 aa27.6■■■□□ 2.01
FNDC3B-204ENST00000421757 ERFEQ4G0M1 354 aa27.59■■■□□ 2.01
FNDC3B-204ENST00000421757 MYH16Q9H6N6 1097 aa27.59■■■□□ 2.01
FNDC3B-204ENST00000421757 PHAXQ9H814 394 aaKnown RBP27.59■■■□□ 2.01
FNDC3B-204ENST00000421757 SRGNP10124 158 aa27.58■■■□□ 2.01
FNDC3B-204ENST00000421757 TCIRG1Q13488 830 aa27.58■■■□□ 2.01
FNDC3B-204ENST00000421757 MASTLQ96GX5 879 aa27.58■■■□□ 2.01
FNDC3B-204ENST00000421757 STK31Q9BXU1 1019 aa27.58■■■□□ 2.01
FNDC3B-204ENST00000421757 SPINK5Q9NQ38 1064 aaPredicted RBP27.58■■■□□ 2.01
FNDC3B-204ENST00000421757 TCERG1O14776 1098 aaKnown RBP27.57■■■□□ 2
FNDC3B-204ENST00000421757 RIC3Q7Z5B4 369 aa27.57■■■□□ 2
FNDC3B-204ENST00000421757 UTP14AQ9BVJ6 771 aaKnown RBP27.57■■■□□ 2
FNDC3B-204ENST00000421757 DLEC1Q9Y238 1755 aa27.57■■■□□ 2
FNDC3B-204ENST00000421757 IBTKQ9P2D0 1353 aaPredicted RBP27.57■■■□□ 2
FNDC3B-204ENST00000421757 NTSR2O95665 410 aa27.56■■■□□ 2
FNDC3B-204ENST00000421757 EXOSC9Q06265 439 aaKnown RBP27.56■■■□□ 2
FNDC3B-204ENST00000421757 STYK1Q6J9G0 422 aa27.56■■■□□ 2
FNDC3B-204ENST00000421757 MIER1Q8N108 512 aa27.56■■■□□ 2
FNDC3B-204ENST00000421757 CNKSR1Q969H4 720 aa27.56■■■□□ 2
FNDC3B-204ENST00000421757 ARFGEF1Q9Y6D6 1849 aa27.55■■■□□ 2
FNDC3B-204ENST00000421757 ZNF219Q9P2Y4 722 aaPredicted RBP27.55■■■□□ 2
FNDC3B-204ENST00000421757 ABCC12Q96J65 1359 aa27.55■■■□□ 2
FNDC3B-204ENST00000421757 COL11A2P13942 1736 aaPredicted RBP27.55■■■□□ 2
FNDC3B-204ENST00000421757 NPR1P16066 1061 aa27.54■■■□□ 2
FNDC3B-204ENST00000421757 NLRP10Q86W26 655 aa27.54■■■□□ 2
FNDC3B-204ENST00000421757 ZNF784Q8NCA9 323 aaPredicted RBP27.54■■■□□ 2
FNDC3B-204ENST00000421757 KLRG2A4D1S0 409 aaPredicted RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms