RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 MPNDQ8N594 471 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
LINC00899-201ENST00000421538 ZNF830Q96NB3 372 aaPredicted RBP16.82■□□□□ 0.28
LINC00899-201ENST00000421538 UVSSAQ2YD98 709 aa16.81■□□□□ 0.28
LINC00899-201ENST00000421538 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
LINC00899-201ENST00000421538 RNMTO43148 476 aaKnown RBP16.81■□□□□ 0.28
LINC00899-201ENST00000421538 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
LINC00899-201ENST00000421538 MEGF6O75095 1541 aa16.8■□□□□ 0.28
LINC00899-201ENST00000421538 LETM1O95202 739 aaPredicted RBP16.8■□□□□ 0.28
LINC00899-201ENST00000421538 BRD1O95696 1058 aa16.8■□□□□ 0.28
LINC00899-201ENST00000421538 RAPGEF4Q8WZA2 1011 aa16.8■□□□□ 0.28
LINC00899-201ENST00000421538 TMX3Q96JJ7 454 aa16.8■□□□□ 0.28
LINC00899-201ENST00000421538 NHSL1Q5SYE7 1610 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 ERC2O15083 957 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 NEK4P51957 841 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 TEFQ10587 303 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 MCM2P49736 904 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 PDE1AP54750 535 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 ATP2B3Q16720 1220 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 TTC12Q9H892 705 aaPredicted RBP16.79■□□□□ 0.28
LINC00899-201ENST00000421538 USP25Q9UHP3 1055 aa16.79■□□□□ 0.28
LINC00899-201ENST00000421538 EXOC6BQ9Y2D4 811 aa16.78■□□□□ 0.28
LINC00899-201ENST00000421538 ABCC6O95255 1503 aa16.78■□□□□ 0.28
LINC00899-201ENST00000421538 EIF4A1P60842 406 aaKnown RBP16.78■□□□□ 0.28
LINC00899-201ENST00000421538 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
LINC00899-201ENST00000421538 FAM177BA6PVY3 158 aa16.77■□□□□ 0.28
LINC00899-201ENST00000421538 C17orf53Q8N3J3 647 aaPredicted RBP16.77■□□□□ 0.28
LINC00899-201ENST00000421538 PDCL2Q8N4E4 241 aa16.77■□□□□ 0.28
LINC00899-201ENST00000421538 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.28
LINC00899-201ENST00000421538 KDM3BQ7LBC6 1761 aa16.77■□□□□ 0.28
LINC00899-201ENST00000421538 BTBD11A6QL63 1104 aa16.77■□□□□ 0.27
LINC00899-201ENST00000421538 ADCY5O95622 1261 aa16.77■□□□□ 0.27
LINC00899-201ENST00000421538 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.27
LINC00899-201ENST00000421538 BCL2L12Q9HB09 334 aa16.77■□□□□ 0.27
LINC00899-201ENST00000421538 ABCA3Q99758 1704 aa16.77■□□□□ 0.27
LINC00899-201ENST00000421538 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
LINC00899-201ENST00000421538 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
LINC00899-201ENST00000421538 HMMRO75330 724 aa16.76■□□□□ 0.27
LINC00899-201ENST00000421538 FGD1P98174 961 aa16.76■□□□□ 0.27
LINC00899-201ENST00000421538 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
LINC00899-201ENST00000421538 OSBPL3Q9H4L5 887 aa16.75■□□□□ 0.27
LINC00899-201ENST00000421538 DIAPH3Q9NSV4 1193 aa16.75■□□□□ 0.27
LINC00899-201ENST00000421538 FOXD4L6Q3SYB3 417 aaPredicted RBP16.74■□□□□ 0.27
LINC00899-201ENST00000421538 FOXD4L3Q6VB84 417 aaPredicted RBP16.74■□□□□ 0.27
LINC00899-201ENST00000421538 SPDYE4A6NLX3 237 aa16.74■□□□□ 0.27
LINC00899-201ENST00000421538 GADD45BO75293 160 aaPredicted RBP16.74■□□□□ 0.27
LINC00899-201ENST00000421538 PHKG2P15735 406 aa16.74■□□□□ 0.27
LINC00899-201ENST00000421538 CUL4AQ13619 759 aa16.74■□□□□ 0.27
LINC00899-201ENST00000421538 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
LINC00899-201ENST00000421538 PALD1Q9ULE6 856 aa16.74■□□□□ 0.27
LINC00899-201ENST00000421538 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
LINC00899-201ENST00000421538 ADAMTS7Q9UKP4 1686 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 OVOS2A0A0G2JMS6 1433 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 KDM6AO15550 1401 aaPredicted RBP16.73■□□□□ 0.27
LINC00899-201ENST00000421538 CYP27B1O15528 508 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 CCT4P50991 539 aaKnown RBP16.73■□□□□ 0.27
LINC00899-201ENST00000421538 FLIIQ13045 1269 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 INTS4Q96HW7 963 aaKnown RBP16.73■□□□□ 0.27
LINC00899-201ENST00000421538 GDPD2Q9HCC8 539 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
LINC00899-201ENST00000421538 WDR17Q8IZU2 1322 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 SALL3Q9BXA9 1300 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
LINC00899-201ENST00000421538 PNMA6EA0A0J9YXQ4 647 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
LINC00899-201ENST00000421538 CCDC183Q5T5S1 534 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 USP48Q86UV5 1035 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 SPG7Q9UQ90 795 aa16.73■□□□□ 0.27
LINC00899-201ENST00000421538 SIPA1L3O60292 1781 aaPredicted RBP16.72■□□□□ 0.27
LINC00899-201ENST00000421538 GNAI2P04899 355 aa16.72■□□□□ 0.27
LINC00899-201ENST00000421538 MCCP23508 829 aa16.72■□□□□ 0.27
LINC00899-201ENST00000421538 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
LINC00899-201ENST00000421538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC00899-201ENST00000421538 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
LINC00899-201ENST00000421538 ESYT1Q9BSJ8 1104 aa16.72■□□□□ 0.27
LINC00899-201ENST00000421538 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
LINC00899-201ENST00000421538 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
LINC00899-201ENST00000421538 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
LINC00899-201ENST00000421538 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.26
LINC00899-201ENST00000421538 SCN11AQ9UI33 1791 aa16.7■□□□□ 0.26
LINC00899-201ENST00000421538 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
LINC00899-201ENST00000421538 IFNL2Q8IZJ0 200 aa16.7■□□□□ 0.26
LINC00899-201ENST00000421538 STRN4Q9NRL3 753 aa16.7■□□□□ 0.26
LINC00899-201ENST00000421538 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
LINC00899-201ENST00000421538 KDM4AO75164 1064 aa16.7■□□□□ 0.26
LINC00899-201ENST00000421538 PLCB2Q00722 1185 aa16.7■□□□□ 0.26
LINC00899-201ENST00000421538 LRRCC1Q9C099 1032 aa16.7■□□□□ 0.26
LINC00899-201ENST00000421538 PKD1L3Q7Z443 1732 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 MX1P20591 662 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 UNC5CLQ8IV45 518 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 RIOK3O14730 519 aaKnown RBP16.69■□□□□ 0.26
LINC00899-201ENST00000421538 ANXA1P04083 346 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC00899-201ENST00000421538 LARP1Q6PKG0 1096 aaKnown RBP16.69■□□□□ 0.26
LINC00899-201ENST00000421538 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms