RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 LIMD1Q9UGP4 676 aa7.35□□□□□ -1.23
CHD2-202ENST00000420239 RPGRIP1LQ68CZ1 1315 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 TUBGCP6Q96RT7 1819 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 FAM135BQ49AJ0 1406 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 TULP2O00295 520 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 VAMP4O75379 141 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 HCLS1P14317 486 aaPredicted RBP7.34□□□□□ -1.23
CHD2-202ENST00000420239 CUL4AQ13619 759 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 NAA30Q147X3 362 aaPredicted RBP7.34□□□□□ -1.23
CHD2-202ENST00000420239 INTS3Q68E01 1043 aaKnown RBP7.34□□□□□ -1.23
CHD2-202ENST00000420239 FAM184AQ8NB25 1140 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 SYAP1Q96A49 352 aaPredicted RBP7.34□□□□□ -1.23
CHD2-202ENST00000420239 GDPD2Q9HCC8 539 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 MORC2Q9Y6X9 1032 aaPredicted RBP7.34□□□□□ -1.23
CHD2-202ENST00000420239 ZFYVE9O95405 1425 aa7.34□□□□□ -1.23
CHD2-202ENST00000420239 MCM2P49736 904 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 SYCP1Q15431 976 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 TERF2Q15554 542 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 TTC13Q8NBP0 860 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 EVC2Q86UK5 1308 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 LRRC7Q96NW7 1537 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 FRMPD1Q5SYB0 1578 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 KDM4AO75164 1064 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 ZNF853P0CG23 659 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 FOSBP53539 338 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 CHAF1AQ13111 956 aaPredicted RBP7.33□□□□□ -1.24
CHD2-202ENST00000420239 C6orf132Q5T0Z8 1188 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 LHX8Q68G74 356 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 KIF18AQ8NI77 898 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 OTUD7AQ8TE49 926 aaPredicted RBP7.33□□□□□ -1.24
CHD2-202ENST00000420239 INTS4Q96HW7 963 aaKnown RBP7.33□□□□□ -1.24
CHD2-202ENST00000420239 TMX3Q96JJ7 454 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 TIGD1Q96MW7 591 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 CCDC9Q9Y3X0 531 aaKnown RBP7.33□□□□□ -1.24
CHD2-202ENST00000420239 PIK3C2BO00750 1634 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 KIF20BQ96Q89 1820 aa7.33□□□□□ -1.24
CHD2-202ENST00000420239 USP48Q86UV5 1035 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 C16orf71Q8IYS4 520 aaPredicted RBP7.32□□□□□ -1.24
CHD2-202ENST00000420239 TMEM87AQ8NBN3 555 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 CCDC66A2RUB6 948 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 FOXD4L6Q3SYB3 417 aaPredicted RBP7.32□□□□□ -1.24
CHD2-202ENST00000420239 CCDC183Q5T5S1 534 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 FOXD4L3Q6VB84 417 aaPredicted RBP7.32□□□□□ -1.24
CHD2-202ENST00000420239 MTMR14Q8NCE2 650 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 BANK1Q8NDB2 785 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 FUCA2Q9BTY2 467 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 TRAIPQ9BWF2 469 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 API5Q9BZZ5 524 aaKnown RBP7.32□□□□□ -1.24
CHD2-202ENST00000420239 FAM53CQ9NYF3 392 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 TRAK1Q9UPV9 953 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 ZNF330Q9Y3S2 320 aaPredicted RBP7.32□□□□□ -1.24
CHD2-202ENST00000420239 ATP10DQ9P241 1426 aa7.32□□□□□ -1.24
CHD2-202ENST00000420239 SMTNL1A8MU46 457 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 REC8O95072 547 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 SDSP20132 328 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 ANKRD44Q8N8A2 993 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 DNAJC2Q99543 621 aaKnown RBP7.31□□□□□ -1.24
CHD2-202ENST00000420239 OSBPL3Q9H4L5 887 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 IFT57Q9NWB7 429 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 PCDH10Q9P2E7 1040 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 A0A1W2PP64 1363 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 RPAP1Q9BWH6 1393 aaPredicted RBP7.31□□□□□ -1.24
CHD2-202ENST00000420239 RTL1A6NKG5 1358 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
CHD2-202ENST00000420239 CAMSAP1Q5T5Y3 1602 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 ATAD2Q6PL18 1390 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 SPC24Q8NBT2 197 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 CD163L1Q9NR16 1453 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 ST7Q9NRC1 585 aa7.31□□□□□ -1.24
CHD2-202ENST00000420239 CPSF1Q10570 1443 aaKnown RBP7.3□□□□□ -1.24
CHD2-202ENST00000420239 ERICH4A6NGS2 130 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 U2SURPO15042 1029 aaKnown RBP7.3□□□□□ -1.24
CHD2-202ENST00000420239 PTGS1P23219 599 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 PPP2R2DQ66LE6 453 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 CASC1Q6TDU7 716 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 RPAP2Q8IXW5 612 aaPredicted RBP7.3□□□□□ -1.24
CHD2-202ENST00000420239 KRT222Q8N1A0 295 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 RETREG2Q8NC44 543 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 SLC39A7Q92504 469 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 CHMP4AQ9BY43 222 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 DLG5Q8TDM6 1919 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 CHD1O14646 1710 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 ABCC3O15438 1527 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 ERBB3P21860 1342 aa7.3□□□□□ -1.24
CHD2-202ENST00000420239 TRIM6-TRIM34B2RNG4 842 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 ERC2O15083 957 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 EPB41L2O43491 1005 aaKnown RBP7.29□□□□□ -1.24
CHD2-202ENST00000420239 GABBR2O75899 941 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 TPM3P06753 285 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 MX1P20591 662 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 ANAPC15P60006 121 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 GNAI1P63096 354 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 NFE2L2Q16236 605 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 CERS3Q8IU89 383 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 AFAP1Q8N556 730 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 SPIRE2Q8WWL2 714 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 TRIM34Q9BYJ4 488 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 KIDINS220Q9ULH0 1771 aa7.29□□□□□ -1.24
CHD2-202ENST00000420239 NEXMIFQ5QGS0 1516 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms