RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 KDM3BQ7LBC6 1761 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 FAM177BA6PVY3 158 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 ANXA1P04083 346 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 SERPINB2P05120 415 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 HOXB7P09629 217 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 NFIXQ14938 502 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 CCDC30Q5VVM6 783 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 DDX21Q9NR30 783 aaKnown RBP eCLIP8.87□□□□□ -0.99
NCL-203ENST00000417652 HYPKQ9NX55 129 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 CD2APQ9Y5K6 639 aa8.87□□□□□ -0.99
NCL-203ENST00000417652 CAMTA2O94983 1202 aa8.86□□□□□ -0.99
NCL-203ENST00000417652 TWISTNBQ3B726 338 aaPredicted RBP8.86□□□□□ -0.99
NCL-203ENST00000417652 TBC1D9BQ66K14 1250 aa8.86□□□□□ -0.99
NCL-203ENST00000417652 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
NCL-203ENST00000417652 COPS6Q7L5N1 327 aa8.86□□□□□ -0.99
NCL-203ENST00000417652 NBPF5PQ86XG9 351 aaPredicted RBP8.86□□□□□ -0.99
NCL-203ENST00000417652 C8orf58Q8NAV2 365 aa8.86□□□□□ -0.99
NCL-203ENST00000417652 XAGE3Q8WTP9 111 aa8.86□□□□□ -0.99
NCL-203ENST00000417652 CHPF2Q9P2E5 772 aa8.86□□□□□ -0.99
NCL-203ENST00000417652 NIP7Q9Y221 180 aaKnown RBP eCLIP8.86□□□□□ -0.99
NCL-203ENST00000417652 CICQ96RK0 1608 aaPredicted RBP8.85□□□□□ -0.99
NCL-203ENST00000417652 ERVV-1B6SEH8 477 aa8.85□□□□□ -0.99
NCL-203ENST00000417652 POLRMTO00411 1230 aaKnown RBP8.85□□□□□ -0.99
NCL-203ENST00000417652 TM4SF1P30408 202 aa8.85□□□□□ -0.99
NCL-203ENST00000417652 ST5P78524 1137 aa8.85□□□□□ -0.99
NCL-203ENST00000417652 HNRNPUQ00839 825 aaKnown RBP eCLIP8.85□□□□□ -0.99
NCL-203ENST00000417652 TTLL7Q6ZT98 887 aa8.85□□□□□ -0.99
NCL-203ENST00000417652 WWC3Q9ULE0 1092 aa8.85□□□□□ -0.99
NCL-203ENST00000417652 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 A0A0G2JLW4 131 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 E9PSI1 815 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 TCERG1O14776 1098 aaKnown RBP8.84□□□□□ -0.99
NCL-203ENST00000417652 DDX58O95786 925 aaKnown RBP8.84□□□□□ -0.99
NCL-203ENST00000417652 GPTP24298 496 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 EXOSC9Q06265 439 aaKnown RBP8.84□□□□□ -0.99
NCL-203ENST00000417652 DDR1Q08345 913 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 HLFQ16534 295 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 PROSER3Q2NL68 480 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 TPTE2Q6XPS3 522 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 RIC3Q7Z5B4 369 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 TSPYL6Q8N831 410 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 CNBD1Q8NA66 436 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 NLGN2Q8NFZ4 835 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
NCL-203ENST00000417652 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
NCL-203ENST00000417652 C4AP0C0L4 1744 aa8.83□□□□□ -1
NCL-203ENST00000417652 SLC4A2P04920 1241 aa8.83□□□□□ -1
NCL-203ENST00000417652 TGFB2P61812 414 aa8.83□□□□□ -1
NCL-203ENST00000417652 PDIA6Q15084 440 aa8.83□□□□□ -1
NCL-203ENST00000417652 HSP90AB3PQ58FF7 597 aa8.83□□□□□ -1
NCL-203ENST00000417652 ANKRD13DQ6ZTN6 518 aa8.83□□□□□ -1
NCL-203ENST00000417652 PPP1R42Q7Z4L9 355 aa8.83□□□□□ -1
NCL-203ENST00000417652 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
NCL-203ENST00000417652 NYXQ9GZU5 481 aa8.83□□□□□ -1
NCL-203ENST00000417652 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
NCL-203ENST00000417652 CARMIL3Q8ND23 1372 aa8.83□□□□□ -1
NCL-203ENST00000417652 H0YIN7 160 aa8.82□□□□□ -1
NCL-203ENST00000417652 RGL2O15211 777 aa8.82□□□□□ -1
NCL-203ENST00000417652 PDE6BP35913 854 aa8.82□□□□□ -1
NCL-203ENST00000417652 GIGYF2Q6Y7W6 1299 aaKnown RBP8.82□□□□□ -1
NCL-203ENST00000417652 PLBD2Q8NHP8 589 aa8.82□□□□□ -1
NCL-203ENST00000417652 ZNF622Q969S3 477 aaKnown RBP eCLIP8.82□□□□□ -12e-24■■■■□ 23.5
NCL-203ENST00000417652 GRIN3BO60391 1043 aa8.81□□□□□ -1
NCL-203ENST00000417652 DPEP1P16444 411 aa8.81□□□□□ -1
NCL-203ENST00000417652 PARP10Q53GL7 1025 aa8.81□□□□□ -1
NCL-203ENST00000417652 C2CD5Q86YS7 1000 aa8.81□□□□□ -1
NCL-203ENST00000417652 BRIP1Q9BX63 1249 aa8.81□□□□□ -1
NCL-203ENST00000417652 PHAXQ9H814 394 aaKnown RBP8.81□□□□□ -1
NCL-203ENST00000417652 PIM2Q9P1W9 311 aa8.81□□□□□ -1
NCL-203ENST00000417652 BCS1LQ9Y276 419 aa8.81□□□□□ -1
NCL-203ENST00000417652 VAMP4O75379 141 aa8.8□□□□□ -1
NCL-203ENST00000417652 CHRNA5P30532 468 aa8.8□□□□□ -1
NCL-203ENST00000417652 SLFN5Q08AF3 891 aa8.8□□□□□ -1
NCL-203ENST00000417652 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
NCL-203ENST00000417652 FKBP5Q13451 457 aaPredicted RBP8.8□□□□□ -1
NCL-203ENST00000417652 TCIRG1Q13488 830 aa8.8□□□□□ -1
NCL-203ENST00000417652 DALRD3Q5D0E6 543 aaKnown RBP8.8□□□□□ -1
NCL-203ENST00000417652 PRR5LQ6MZQ0 368 aa8.8□□□□□ -1
NCL-203ENST00000417652 CDCA7LQ96GN5 454 aa8.8□□□□□ -1
NCL-203ENST00000417652 UTP14AQ9BVJ6 771 aaKnown RBP8.8□□□□□ -1
NCL-203ENST00000417652 TRMT112Q9UI30 125 aaKnown RBP8.8□□□□□ -1
NCL-203ENST00000417652 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
NCL-203ENST00000417652 COL24A1Q17RW2 1714 aa8.8□□□□□ -1
NCL-203ENST00000417652 ATP5J2-PTCD1G3V325 749 aa8.79□□□□□ -1
NCL-203ENST00000417652 SUSD4Q5VX71 490 aa8.79□□□□□ -1
NCL-203ENST00000417652 ARHGAP27Q6ZUM4 889 aa8.79□□□□□ -1
NCL-203ENST00000417652 NUTM1Q86Y26 1132 aa8.79□□□□□ -1
NCL-203ENST00000417652 ZNF34Q8IZ26 560 aa8.79□□□□□ -1
NCL-203ENST00000417652 ZNF428Q96B54 188 aa8.79□□□□□ -1
NCL-203ENST00000417652 MYD88Q99836 296 aa8.79□□□□□ -1
NCL-203ENST00000417652 NUP98P52948 1817 aa8.79□□□□□ -1
NCL-203ENST00000417652 ZNF521Q96K83 1311 aa8.79□□□□□ -1
NCL-203ENST00000417652 PI4KAP2A4QPH2 592 aa8.78□□□□□ -1
NCL-203ENST00000417652 ERFEQ4G0M1 354 aa8.78□□□□□ -1
NCL-203ENST00000417652 KSR2Q6VAB6 950 aa8.78□□□□□ -1
NCL-203ENST00000417652 LRP10Q7Z4F1 713 aa8.78□□□□□ -1
NCL-203ENST00000417652 TTLL6Q8N841 843 aa8.78□□□□□ -1
NCL-203ENST00000417652 PI4KAP1Q8N8J0 262 aa8.78□□□□□ -1
NCL-203ENST00000417652 RPGRQ92834 1020 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms