RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 DPEP1P16444 411 aa14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 ST5P78524 1137 aa14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 CLEC4GQ6UXB4 293 aa14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 CNBD1Q8NA66 436 aa14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 CHPF2Q9P2E5 772 aa14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 SCN7AQ01118 1682 aa14.3□□□□□ -0.12
TM9SF4-203ENST00000417389 CCER2I3L3R5 266 aa14.29□□□□□ -0.12
TM9SF4-203ENST00000417389 HOXB7P09629 217 aa14.29□□□□□ -0.12
TM9SF4-203ENST00000417389 CHRNA5P30532 468 aa14.29□□□□□ -0.12
TM9SF4-203ENST00000417389 HLFQ16534 295 aa14.29□□□□□ -0.12
TM9SF4-203ENST00000417389 PROSER3Q2NL68 480 aa14.29□□□□□ -0.12
TM9SF4-203ENST00000417389 MAP3K15Q6ZN16 1313 aa14.29□□□□□ -0.12
TM9SF4-203ENST00000417389 YBX3P16989 372 aaKnown RBP eCLIP14.28□□□□□ -0.122e-6■■■■□ 21
TM9SF4-203ENST00000417389 GPTP24298 496 aa14.28□□□□□ -0.12
TM9SF4-203ENST00000417389 YY1P25490 414 aa14.28□□□□□ -0.12
TM9SF4-203ENST00000417389 COPS6Q7L5N1 327 aa14.28□□□□□ -0.12
TM9SF4-203ENST00000417389 XAGE3Q8WTP9 111 aa14.28□□□□□ -0.12
TM9SF4-203ENST00000417389 CHMP4AQ9BY43 222 aa14.28□□□□□ -0.12
TM9SF4-203ENST00000417389 DDX21Q9NR30 783 aaKnown RBP eCLIP14.28□□□□□ -0.12
TM9SF4-203ENST00000417389 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
TM9SF4-203ENST00000417389 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.12
TM9SF4-203ENST00000417389 IL16Q14005 1332 aa14.27□□□□□ -0.12
TM9SF4-203ENST00000417389 ERVV-1B6SEH8 477 aa14.27□□□□□ -0.13
TM9SF4-203ENST00000417389 H0YIN7 160 aa14.27□□□□□ -0.13
TM9SF4-203ENST00000417389 PRR5LQ6MZQ0 368 aa14.27□□□□□ -0.13
TM9SF4-203ENST00000417389 C2CD5Q86YS7 1000 aa14.27□□□□□ -0.13
TM9SF4-203ENST00000417389 WDR63Q8IWG1 891 aa14.27□□□□□ -0.13
TM9SF4-203ENST00000417389 C8orf58Q8NAV2 365 aa14.27□□□□□ -0.13
TM9SF4-203ENST00000417389 PIM2Q9P1W9 311 aa14.27□□□□□ -0.13
TM9SF4-203ENST00000417389 PDE6BP35913 854 aa14.26□□□□□ -0.13
TM9SF4-203ENST00000417389 PDIA6Q15084 440 aa14.26□□□□□ -0.13
TM9SF4-203ENST00000417389 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
TM9SF4-203ENST00000417389 TPTE2Q6XPS3 522 aa14.26□□□□□ -0.13
TM9SF4-203ENST00000417389 HYPKQ9NX55 129 aa14.26□□□□□ -0.13
TM9SF4-203ENST00000417389 BCORQ6W2J9 1755 aa14.25□□□□□ -0.13
TM9SF4-203ENST00000417389 GOLGA2Q08379 1002 aa14.25□□□□□ -0.13
TM9SF4-203ENST00000417389 DALRD3Q5D0E6 543 aaKnown RBP14.25□□□□□ -0.13
TM9SF4-203ENST00000417389 CCDC30Q5VVM6 783 aa14.25□□□□□ -0.13
TM9SF4-203ENST00000417389 MIER1Q8N108 512 aa14.25□□□□□ -0.13
TM9SF4-203ENST00000417389 ZNF622Q969S3 477 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■■□□□ 12.3
TM9SF4-203ENST00000417389 STK31Q9BXU1 1019 aa14.25□□□□□ -0.13
TM9SF4-203ENST00000417389 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
TM9SF4-203ENST00000417389 N4BP2Q86UW6 1770 aaPredicted RBP14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 TCERG1O14776 1098 aaKnown RBP14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 RGL2O15211 777 aa14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 TWISTNBQ3B726 338 aaPredicted RBP14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 GIGYF2Q6Y7W6 1299 aaKnown RBP14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 TSPYL6Q8N831 410 aa14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 BRIP1Q9BX63 1249 aa14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
TM9SF4-203ENST00000417389 HSP90AB3PQ58FF7 597 aa14.23□□□□□ -0.13
TM9SF4-203ENST00000417389 ARHGAP27Q6ZUM4 889 aa14.23□□□□□ -0.13
TM9SF4-203ENST00000417389 RIC3Q7Z5B4 369 aa14.23□□□□□ -0.13
TM9SF4-203ENST00000417389 AFDNP55196 1824 aaKnown RBP14.22□□□□□ -0.13
TM9SF4-203ENST00000417389 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
TM9SF4-203ENST00000417389 ANKRD13DQ6ZTN6 518 aa14.22□□□□□ -0.13
TM9SF4-203ENST00000417389 PPP1R42Q7Z4L9 355 aa14.22□□□□□ -0.13
TM9SF4-203ENST00000417389 NUTM1Q86Y26 1132 aa14.22□□□□□ -0.13
TM9SF4-203ENST00000417389 ZNF428Q96B54 188 aa14.22□□□□□ -0.13
TM9SF4-203ENST00000417389 KIF13BQ9NQT8 1826 aa14.22□□□□□ -0.13
TM9SF4-203ENST00000417389 GOLGB1Q14789 3259 aaKnown RBP14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 KCNA3P22001 575 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 PARP10Q53GL7 1025 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 LRP10Q7Z4F1 713 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 TTLL6Q8N841 843 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 PHAXQ9H814 394 aaKnown RBP14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 UTRNP46939 3433 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 ATP10DQ9P241 1426 aa14.21□□□□□ -0.13
TM9SF4-203ENST00000417389 DDX58O95786 925 aaKnown RBP14.2□□□□□ -0.14
TM9SF4-203ENST00000417389 ERFEQ4G0M1 354 aa14.2□□□□□ -0.14
TM9SF4-203ENST00000417389 SUSD4Q5VX71 490 aa14.2□□□□□ -0.14
TM9SF4-203ENST00000417389 ZNF34Q8IZ26 560 aa14.2□□□□□ -0.14
TM9SF4-203ENST00000417389 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
TM9SF4-203ENST00000417389 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
TM9SF4-203ENST00000417389 NRXN2Q9P2S2 1712 aa14.19□□□□□ -0.14
TM9SF4-203ENST00000417389 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
TM9SF4-203ENST00000417389 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
TM9SF4-203ENST00000417389 SPINK5Q9NQ38 1064 aaPredicted RBP14.19□□□□□ -0.14
TM9SF4-203ENST00000417389 TRMT112Q9UI30 125 aaKnown RBP14.19□□□□□ -0.14
TM9SF4-203ENST00000417389 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
TM9SF4-203ENST00000417389 MASTLQ96GX5 879 aa14.18□□□□□ -0.14
TM9SF4-203ENST00000417389 NUP98P52948 1817 aa14.18□□□□□ -0.14
TM9SF4-203ENST00000417389 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
TM9SF4-203ENST00000417389 RPGRQ92834 1020 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-203ENST00000417389 CNKSR1Q969H4 720 aa14.17□□□□□ -0.14
TM9SF4-203ENST00000417389 MYD88Q99836 296 aa14.17□□□□□ -0.14
TM9SF4-203ENST00000417389 KIAA1551Q9HCM1 1747 aa14.17□□□□□ -0.14
TM9SF4-203ENST00000417389 E9PSI1 815 aa14.16□□□□□ -0.14
TM9SF4-203ENST00000417389 NTSR2O95665 410 aa14.16□□□□□ -0.14
TM9SF4-203ENST00000417389 SRGNP10124 158 aa14.16□□□□□ -0.14
TM9SF4-203ENST00000417389 NPR1P16066 1061 aa14.16□□□□□ -0.14
TM9SF4-203ENST00000417389 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
TM9SF4-203ENST00000417389 STYK1Q6J9G0 422 aa14.16□□□□□ -0.14
TM9SF4-203ENST00000417389 ABCC12Q96J65 1359 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 334.5 ms