RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ANP32CO43423 234 aa20.43■□□□□ 0.86
ITGB1-204ENST00000417122 EIF2S2P20042 333 aaKnown RBP20.43■□□□□ 0.86
ITGB1-204ENST00000417122 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
ITGB1-204ENST00000417122 BRIP1Q9BX63 1249 aa20.43■□□□□ 0.86
ITGB1-204ENST00000417122 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
ITGB1-204ENST00000417122 PDE6BP35913 854 aa20.42■□□□□ 0.86
ITGB1-204ENST00000417122 ST5P78524 1137 aa20.42■□□□□ 0.86
ITGB1-204ENST00000417122 HLFQ16534 295 aa20.42■□□□□ 0.86
ITGB1-204ENST00000417122 ADCY9O60503 1353 aa20.42■□□□□ 0.86
ITGB1-204ENST00000417122 ATP10DQ9P241 1426 aa20.42■□□□□ 0.86
ITGB1-204ENST00000417122 NUP98P52948 1817 aa20.41■□□□□ 0.86
ITGB1-204ENST00000417122 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
ITGB1-204ENST00000417122 TTLL7Q6ZT98 887 aa20.41■□□□□ 0.86
ITGB1-204ENST00000417122 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
ITGB1-204ENST00000417122 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
ITGB1-204ENST00000417122 NIP7Q9Y221 180 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGB1-204ENST00000417122 ERVV-1B6SEH8 477 aa20.4■□□□□ 0.86
ITGB1-204ENST00000417122 MAP3K15Q6ZN16 1313 aa20.4■□□□□ 0.86
ITGB1-204ENST00000417122 TTLL6Q8N841 843 aa20.4■□□□□ 0.86
ITGB1-204ENST00000417122 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
ITGB1-204ENST00000417122 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-204ENST00000417122 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
ITGB1-204ENST00000417122 TPTE2Q6XPS3 522 aa20.38■□□□□ 0.85
ITGB1-204ENST00000417122 ZNF622Q969S3 477 aaKnown RBP eCLIP20.38■□□□□ 0.855e-8■□□□□ 8.1
ITGB1-204ENST00000417122 PDIA6Q15084 440 aa20.37■□□□□ 0.85
ITGB1-204ENST00000417122 NECTIN2Q92692 538 aa20.37■□□□□ 0.85
ITGB1-204ENST00000417122 ZBTB3Q9H5J0 574 aa20.37■□□□□ 0.85
ITGB1-204ENST00000417122 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
ITGB1-204ENST00000417122 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
ITGB1-204ENST00000417122 ANXA1P04083 346 aa20.36■□□□□ 0.85
ITGB1-204ENST00000417122 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
ITGB1-204ENST00000417122 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
ITGB1-204ENST00000417122 LRP10Q7Z4F1 713 aa20.36■□□□□ 0.85
ITGB1-204ENST00000417122 GPBP1L1Q9HC44 474 aaPredicted RBP20.35■□□□□ 0.85
ITGB1-204ENST00000417122 MBIPQ9NS73 344 aa20.35■□□□□ 0.85
ITGB1-204ENST00000417122 HOXB7P09629 217 aa20.34■□□□□ 0.85
ITGB1-204ENST00000417122 ZNF853P0CG23 659 aa20.34■□□□□ 0.85
ITGB1-204ENST00000417122 ZNF526Q8TF50 670 aaPredicted RBP20.34■□□□□ 0.85
ITGB1-204ENST00000417122 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
ITGB1-204ENST00000417122 SBF1O95248 1867 aa20.34■□□□□ 0.85
ITGB1-204ENST00000417122 CACNA1SQ13698 1873 aa20.33■□□□□ 0.85
ITGB1-204ENST00000417122 SRGNP10124 158 aa20.33■□□□□ 0.85
ITGB1-204ENST00000417122 GTF2E1P29083 439 aaPredicted RBP20.33■□□□□ 0.85
ITGB1-204ENST00000417122 GNAI1P63096 354 aa20.33■□□□□ 0.85
ITGB1-204ENST00000417122 C9orf131Q5VYM1 1079 aa20.33■□□□□ 0.85
ITGB1-204ENST00000417122 STYK1Q6J9G0 422 aa20.33■□□□□ 0.85
ITGB1-204ENST00000417122 GIGYF2Q6Y7W6 1299 aaKnown RBP20.33■□□□□ 0.85
ITGB1-204ENST00000417122 MASTLQ96GX5 879 aa20.33■□□□□ 0.85
ITGB1-204ENST00000417122 NYXQ9GZU5 481 aa20.33■□□□□ 0.85
ITGB1-204ENST00000417122 GPTP24298 496 aa20.32■□□□□ 0.84
ITGB1-204ENST00000417122 HDGFL1Q5TGJ6 251 aa20.32■□□□□ 0.84
ITGB1-204ENST00000417122 CNKSR1Q969H4 720 aa20.32■□□□□ 0.84
ITGB1-204ENST00000417122 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
ITGB1-204ENST00000417122 ARFGEF2Q9Y6D5 1785 aa20.31■□□□□ 0.84
ITGB1-204ENST00000417122 RASSF7Q02833 373 aa20.31■□□□□ 0.84
ITGB1-204ENST00000417122 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
ITGB1-204ENST00000417122 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
ITGB1-204ENST00000417122 ZNF34Q8IZ26 560 aa20.31■□□□□ 0.84
ITGB1-204ENST00000417122 RNF181Q9P0P0 153 aa20.31■□□□□ 0.84
ITGB1-204ENST00000417122 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
ITGB1-204ENST00000417122 UBN2Q6ZU65 1347 aa20.3■□□□□ 0.84
ITGB1-204ENST00000417122 SLX4Q8IY92 1834 aa20.3■□□□□ 0.84
ITGB1-204ENST00000417122 KLRG2A4D1S0 409 aaPredicted RBP20.3■□□□□ 0.84
ITGB1-204ENST00000417122 C1QTNF8P60827 252 aa20.3■□□□□ 0.84
ITGB1-204ENST00000417122 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
ITGB1-204ENST00000417122 NUTM1Q86Y26 1132 aa20.3■□□□□ 0.84
ITGB1-204ENST00000417122 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
ITGB1-204ENST00000417122 ZNF219Q9P2Y4 722 aaPredicted RBP20.3■□□□□ 0.84
ITGB1-204ENST00000417122 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
ITGB1-204ENST00000417122 C21orf2O43822 256 aa20.29■□□□□ 0.84
ITGB1-204ENST00000417122 NPR1P16066 1061 aa20.29■□□□□ 0.84
ITGB1-204ENST00000417122 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
ITGB1-204ENST00000417122 IBTKQ9P2D0 1353 aaPredicted RBP20.29■□□□□ 0.84
ITGB1-204ENST00000417122 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
ITGB1-204ENST00000417122 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
ITGB1-204ENST00000417122 PRPF40BQ6NWY9 871 aaKnown RBP20.28■□□□□ 0.84
ITGB1-204ENST00000417122 DBF4Q9UBU7 674 aaPredicted RBP20.28■□□□□ 0.84
ITGB1-204ENST00000417122 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
ITGB1-204ENST00000417122 ANKRD36CQ5JPF3 1778 aa20.28■□□□□ 0.84
ITGB1-204ENST00000417122 FER1L6Q2WGJ9 1857 aa20.27■□□□□ 0.84
ITGB1-204ENST00000417122 ABCC12Q96J65 1359 aa20.27■□□□□ 0.84
ITGB1-204ENST00000417122 ERFEQ4G0M1 354 aa20.27■□□□□ 0.84
ITGB1-204ENST00000417122 PARP10Q53GL7 1025 aa20.27■□□□□ 0.84
ITGB1-204ENST00000417122 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
ITGB1-204ENST00000417122 NFKBIEO00221 500 aa20.26■□□□□ 0.83
ITGB1-204ENST00000417122 NTSR2O95665 410 aa20.26■□□□□ 0.83
ITGB1-204ENST00000417122 LMNB1P20700 586 aa20.26■□□□□ 0.83
ITGB1-204ENST00000417122 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
ITGB1-204ENST00000417122 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
ITGB1-204ENST00000417122 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
ITGB1-204ENST00000417122 PRELPP51888 382 aa20.25■□□□□ 0.83
ITGB1-204ENST00000417122 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
ITGB1-204ENST00000417122 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
ITGB1-204ENST00000417122 RIC1Q4ADV7 1423 aa20.25■□□□□ 0.83
ITGB1-204ENST00000417122 ALDH1B1P30837 517 aa20.24■□□□□ 0.83
ITGB1-204ENST00000417122 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
ITGB1-204ENST00000417122 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
ITGB1-204ENST00000417122 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
ITGB1-204ENST00000417122 CRY2Q49AN0 593 aa20.23■□□□□ 0.83
ITGB1-204ENST00000417122 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms