RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 LMNB1P20700 586 aa23.13■■□□□ 1.29
PDLIM2-208ENST00000416159 RASSF7Q02833 373 aa23.13■■□□□ 1.29
PDLIM2-208ENST00000416159 TPTE2Q6XPS3 522 aa23.13■■□□□ 1.29
PDLIM2-208ENST00000416159 CNKSR1Q969H4 720 aa23.13■■□□□ 1.29
PDLIM2-208ENST00000416159 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
PDLIM2-208ENST00000416159 NIP7Q9Y221 180 aaKnown RBP eCLIP23.13■■□□□ 1.29
PDLIM2-208ENST00000416159 KDM2BQ8NHM5 1336 aa23.12■■□□□ 1.29
PDLIM2-208ENST00000416159 STYK1Q6J9G0 422 aa23.12■■□□□ 1.29
PDLIM2-208ENST00000416159 NMRK2Q9NPI5 230 aa23.12■■□□□ 1.29
PDLIM2-208ENST00000416159 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
PDLIM2-208ENST00000416159 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 ERVV-1B6SEH8 477 aa23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 TOMM70O94826 608 aa23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 SRGNP10124 158 aa23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 HSPA6P17066 643 aa23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 WDR43Q15061 677 aaKnown RBP eCLIP23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 NGEFQ8N5V2 710 aa23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 MASTLQ96GX5 879 aa23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 RRP7AQ9Y3A4 280 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-208ENST00000416159 C21orf2O43822 256 aa23.1■■□□□ 1.29
PDLIM2-208ENST00000416159 HLFQ16534 295 aa23.1■■□□□ 1.29
PDLIM2-208ENST00000416159 ERBB4Q15303 1308 aa23.09■■□□□ 1.29
PDLIM2-208ENST00000416159 RUNDC1Q96C34 613 aa23.09■■□□□ 1.29
PDLIM2-208ENST00000416159 COL11A2P13942 1736 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-208ENST00000416159 NFKBIEO00221 500 aa23.08■■□□□ 1.29
PDLIM2-208ENST00000416159 KIF6Q6ZMV9 814 aa23.08■■□□□ 1.29
PDLIM2-208ENST00000416159 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
PDLIM2-208ENST00000416159 MAP3K15Q6ZN16 1313 aa23.08■■□□□ 1.28
PDLIM2-208ENST00000416159 MYL6BP14649 208 aa23.07■■□□□ 1.28
PDLIM2-208ENST00000416159 PRELPP51888 382 aa23.07■■□□□ 1.28
PDLIM2-208ENST00000416159 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-208ENST00000416159 ZNF219Q9P2Y4 722 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-208ENST00000416159 KLRG2A4D1S0 409 aaPredicted RBP23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 FAM177BA6PVY3 158 aa23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 GTF2E1P29083 439 aaPredicted RBP23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 NEUROD2Q15784 382 aa23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 SOGA3Q5TF21 947 aa23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 TTLL7Q6ZT98 887 aa23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 C16orf71Q8IYS4 520 aaPredicted RBP23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 CCDC88AQ3V6T2 1871 aa23.06■■□□□ 1.28
PDLIM2-208ENST00000416159 NPR1P16066 1061 aa23.05■■□□□ 1.28
PDLIM2-208ENST00000416159 PRPF40BQ6NWY9 871 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-208ENST00000416159 NYXQ9GZU5 481 aa23.05■■□□□ 1.28
PDLIM2-208ENST00000416159 RRAGCQ9HB90 399 aa23.05■■□□□ 1.28
PDLIM2-208ENST00000416159 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
PDLIM2-208ENST00000416159 SLX4Q8IY92 1834 aa23.04■■□□□ 1.28
PDLIM2-208ENST00000416159 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
PDLIM2-208ENST00000416159 RBM46Q8TBY0 533 aaKnown RBP23.04■■□□□ 1.28
PDLIM2-208ENST00000416159 NUP98P52948 1817 aa23.03■■□□□ 1.28
PDLIM2-208ENST00000416159 GLTPD2A6NH11 291 aa23.03■■□□□ 1.28
PDLIM2-208ENST00000416159 LTBP3Q9NS15 1303 aa23.03■■□□□ 1.28
PDLIM2-208ENST00000416159 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
PDLIM2-208ENST00000416159 TAOK3Q9H2K8 898 aa23.02■■□□□ 1.28
PDLIM2-208ENST00000416159 ZBTB3Q9H5J0 574 aa23.02■■□□□ 1.28
PDLIM2-208ENST00000416159 CHL1O00533 1208 aa23.01■■□□□ 1.27
PDLIM2-208ENST00000416159 GIGYF2Q6Y7W6 1299 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-208ENST00000416159 TRIM35Q9UPQ4 493 aa23.01■■□□□ 1.27
PDLIM2-208ENST00000416159 ARFGEF2Q9Y6D5 1785 aa23■■□□□ 1.27
PDLIM2-208ENST00000416159 ALDH1B1P30837 517 aa23■■□□□ 1.27
PDLIM2-208ENST00000416159 PDIA6Q15084 440 aa23■■□□□ 1.27
PDLIM2-208ENST00000416159 ERFEQ4G0M1 354 aa23■■□□□ 1.27
PDLIM2-208ENST00000416159 DPY19L2Q6NUT2 758 aa23■■□□□ 1.27
PDLIM2-208ENST00000416159 C7orf43Q8WVR3 580 aa23■■□□□ 1.27
PDLIM2-208ENST00000416159 CACNA1SQ13698 1873 aa23■■□□□ 1.27
PDLIM2-208ENST00000416159 TNRC6CQ9HCJ0 1690 aaKnown RBP23■■□□□ 1.27
PDLIM2-208ENST00000416159 APLP1P51693 650 aa22.99■■□□□ 1.27
PDLIM2-208ENST00000416159 LRP10Q7Z4F1 713 aa22.99■■□□□ 1.27
PDLIM2-208ENST00000416159 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
PDLIM2-208ENST00000416159 DICER1Q9UPY3 1922 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-208ENST00000416159 GPTP24298 496 aa22.98■■□□□ 1.27
PDLIM2-208ENST00000416159 FSTL1Q12841 308 aa22.98■■□□□ 1.27
PDLIM2-208ENST00000416159 CCDC93Q567U6 631 aa22.98■■□□□ 1.27
PDLIM2-208ENST00000416159 NUTM1Q86Y26 1132 aa22.98■■□□□ 1.27
PDLIM2-208ENST00000416159 LAS1LQ9Y4W2 734 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-208ENST00000416159 IBTKQ9P2D0 1353 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-208ENST00000416159 VEGFAP15692 232 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-208ENST00000416159 SUSD4Q5VX71 490 aa22.97■■□□□ 1.27
PDLIM2-208ENST00000416159 TIAM2Q8IVF5 1701 aa22.96■■□□□ 1.27
PDLIM2-208ENST00000416159 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-208ENST00000416159 PARP10Q53GL7 1025 aa22.96■■□□□ 1.27
PDLIM2-208ENST00000416159 PPP1R42Q7Z4L9 355 aa22.96■■□□□ 1.27
PDLIM2-208ENST00000416159 UBN2Q6ZU65 1347 aa22.96■■□□□ 1.27
PDLIM2-208ENST00000416159 ANXA1P04083 346 aa22.95■■□□□ 1.26
PDLIM2-208ENST00000416159 PROSER3Q2NL68 480 aa22.95■■□□□ 1.26
PDLIM2-208ENST00000416159 CRY2Q49AN0 593 aa22.95■■□□□ 1.26
PDLIM2-208ENST00000416159 RTKN2Q8IZC4 609 aa22.95■■□□□ 1.26
PDLIM2-208ENST00000416159 NECTIN2Q92692 538 aa22.95■■□□□ 1.26
PDLIM2-208ENST00000416159 ABCC12Q96J65 1359 aa22.94■■□□□ 1.26
PDLIM2-208ENST00000416159 DDX21Q9NR30 783 aaKnown RBP eCLIP22.94■■□□□ 1.26
PDLIM2-208ENST00000416159 RIC1Q4ADV7 1423 aa22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 NTSR2O95665 410 aa22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 HOXB7P09629 217 aa22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 FKBP4Q02790 459 aaKnown RBP eCLIP22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 HSP90AB3PQ58FF7 597 aa22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 COPS6Q7L5N1 327 aa22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 SMC1BQ8NDV3 1235 aa22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 CFAP44Q96MT7 982 aa22.93■■□□□ 1.26
PDLIM2-208ENST00000416159 KRT24Q2M2I5 525 aa22.92■■□□□ 1.26
PDLIM2-208ENST00000416159 RPGRQ92834 1020 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-208ENST00000416159 HOXA10P31260 410 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms