RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 GRIK4Q16099 956 aa5.68□□□□□ -1.5
LINC00428-201ENST00000415620 RB1CC1Q8TDY2 1594 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 TMEM229AB2RXF0 380 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 BRPF1P55201 1214 aaPredicted RBP5.67□□□□□ -1.5
LINC00428-201ENST00000415620 COL9A3Q14050 684 aaPredicted RBP5.67□□□□□ -1.5
LINC00428-201ENST00000415620 MAP7D1Q3KQU3 841 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 MICALL1Q8N3F8 863 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 BCANQ96GW7 911 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 SERTAD1Q9UHV2 236 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 USP3Q9Y6I4 520 aa5.67□□□□□ -1.5
LINC00428-201ENST00000415620 A6NJY4 79 aa5.66□□□□□ -1.5
LINC00428-201ENST00000415620 NEUROD1Q13562 356 aa5.66□□□□□ -1.5
LINC00428-201ENST00000415620 ADGRE1Q14246 886 aa5.66□□□□□ -1.5
LINC00428-201ENST00000415620 TRAPPC3LQ5T215 181 aa5.66□□□□□ -1.5
LINC00428-201ENST00000415620 TNFRSF25Q93038 417 aa5.66□□□□□ -1.5
LINC00428-201ENST00000415620 NEUROD4Q9HD90 331 aa5.66□□□□□ -1.5
LINC00428-201ENST00000415620 ALBP02768 609 aa5.65□□□□□ -1.5
LINC00428-201ENST00000415620 NID1P14543 1247 aa5.65□□□□□ -1.5
LINC00428-201ENST00000415620 TXNRD3Q86VQ6 643 aa5.65□□□□□ -1.5
LINC00428-201ENST00000415620 PLPP7Q8NBV4 271 aa5.65□□□□□ -1.5
LINC00428-201ENST00000415620 STARD13Q9Y3M8 1113 aa5.65□□□□□ -1.5
LINC00428-201ENST00000415620 NRG1Q02297 640 aaPredicted RBP5.64□□□□□ -1.51
LINC00428-201ENST00000415620 MBTPS1Q14703 1052 aa5.64□□□□□ -1.51
LINC00428-201ENST00000415620 C8orf86Q6ZUL3 223 aa5.64□□□□□ -1.51
LINC00428-201ENST00000415620 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
LINC00428-201ENST00000415620 PRM3Q9NNZ6 103 aa5.64□□□□□ -1.51
LINC00428-201ENST00000415620 CUX2O14529 1486 aa5.64□□□□□ -1.51
LINC00428-201ENST00000415620 ELNP15502 786 aa5.63□□□□□ -1.51
LINC00428-201ENST00000415620 ADH7P40394 386 aa5.63□□□□□ -1.51
LINC00428-201ENST00000415620 VAC14Q08AM6 782 aa5.63□□□□□ -1.51
LINC00428-201ENST00000415620 LRRC69Q6ZNQ3 347 aa5.63□□□□□ -1.51
LINC00428-201ENST00000415620 TP53INP1Q96A56 240 aa5.63□□□□□ -1.51
LINC00428-201ENST00000415620 PCDHGA11Q9Y5H2 935 aa5.63□□□□□ -1.51
LINC00428-201ENST00000415620 PARP3Q9Y6F1 533 aa5.63□□□□□ -1.51
LINC00428-201ENST00000415620 BACH1O14867 736 aa5.62□□□□□ -1.51
LINC00428-201ENST00000415620 LILRB5O75023 590 aa5.62□□□□□ -1.51
LINC00428-201ENST00000415620 SELPP16109 830 aa5.62□□□□□ -1.51
LINC00428-201ENST00000415620 RAC1P63000 192 aa5.62□□□□□ -1.51
LINC00428-201ENST00000415620 SFSWAPQ12872 951 aaKnown RBP5.62□□□□□ -1.51
LINC00428-201ENST00000415620 ZDHHC1Q8WTX9 485 aa5.62□□□□□ -1.51
LINC00428-201ENST00000415620 C7orf43Q8WVR3 580 aa5.62□□□□□ -1.51
LINC00428-201ENST00000415620 LENG1Q96BZ8 264 aaPredicted RBP5.62□□□□□ -1.51
LINC00428-201ENST00000415620 SLC30A3Q99726 388 aa5.62□□□□□ -1.51
LINC00428-201ENST00000415620 GPC6Q9Y625 555 aaPredicted RBP5.62□□□□□ -1.51
LINC00428-201ENST00000415620 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
LINC00428-201ENST00000415620 TXLNAP40222 546 aa5.61□□□□□ -1.51
LINC00428-201ENST00000415620 SPEM2Q0P670 501 aa5.61□□□□□ -1.51
LINC00428-201ENST00000415620 C20orf204Q6ZNR8 217 aa5.61□□□□□ -1.51
LINC00428-201ENST00000415620 L3MBTL2Q969R5 705 aa5.61□□□□□ -1.51
LINC00428-201ENST00000415620 BICRAQ9NZM4 1560 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 A0A0A0MRY4 1105 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 EML1O00423 815 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 SOX11P35716 441 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 EPHA4P54764 986 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 TEAD4Q15561 434 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 WASHC4Q2M389 1173 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 MCTP1Q6DN14 999 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 SCHIP1Q9P0W5 487 aaPredicted RBP5.6□□□□□ -1.51
LINC00428-201ENST00000415620 USP21Q9UK80 565 aa5.6□□□□□ -1.51
LINC00428-201ENST00000415620 NOS2P35228 1153 aa5.59□□□□□ -1.51
LINC00428-201ENST00000415620 TXKP42681 527 aa5.59□□□□□ -1.51
LINC00428-201ENST00000415620 RNF112Q9ULX5 631 aa5.59□□□□□ -1.51
LINC00428-201ENST00000415620 PIK3CDO00329 1044 aa5.58□□□□□ -1.52
LINC00428-201ENST00000415620 PAX4O43316 350 aa5.58□□□□□ -1.52
LINC00428-201ENST00000415620 SHISA2Q6UWI4 295 aa5.58□□□□□ -1.52
LINC00428-201ENST00000415620 RAB44Q7Z6P3 723 aaPredicted RBP5.58□□□□□ -1.52
LINC00428-201ENST00000415620 GDPD2Q9HCC8 539 aa5.58□□□□□ -1.52
LINC00428-201ENST00000415620 ZNF232Q9UNY5 417 aa5.58□□□□□ -1.52
LINC00428-201ENST00000415620 LZTS3O60299 673 aaPredicted RBP5.57□□□□□ -1.52
LINC00428-201ENST00000415620 POTEAQ6S8J7 498 aa5.57□□□□□ -1.52
LINC00428-201ENST00000415620 RHPN1Q8TCX5 695 aa5.57□□□□□ -1.52
LINC00428-201ENST00000415620 CEP63Q96MT8 703 aa5.57□□□□□ -1.52
LINC00428-201ENST00000415620 SSBP4Q9BWG4 385 aaPredicted RBP5.57□□□□□ -1.52
LINC00428-201ENST00000415620 BRD7Q9NPI1 651 aa5.57□□□□□ -1.52
LINC00428-201ENST00000415620 ZNF358Q9NW07 568 aa5.57□□□□□ -1.52
LINC00428-201ENST00000415620 ANKIB1Q9P2G1 1089 aa5.57□□□□□ -1.52
LINC00428-201ENST00000415620 COBLO75128 1261 aa5.56□□□□□ -1.52
LINC00428-201ENST00000415620 SEMA3FQ13275 785 aa5.56□□□□□ -1.52
LINC00428-201ENST00000415620 FMR1NBQ8N0W7 255 aaPredicted RBP5.56□□□□□ -1.52
LINC00428-201ENST00000415620 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC00428-201ENST00000415620 UBE2OQ9C0C9 1292 aaKnown RBP5.56□□□□□ -1.52
LINC00428-201ENST00000415620 JPH1Q9HDC5 661 aaPredicted RBP5.56□□□□□ -1.52
LINC00428-201ENST00000415620 KCNH4Q9UQ05 1017 aa5.56□□□□□ -1.52
LINC00428-201ENST00000415620 COL17A1Q9UMD9 1497 aaPredicted RBP5.56□□□□□ -1.52
LINC00428-201ENST00000415620 SERTM1A2A2V5 107 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 ABL2P42684 1182 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 KCNQ4P56696 695 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 GTF2IP78347 998 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 TBC1D8BQ0IIM8 1120 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 EML3Q32P44 896 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 NFATC2IPQ8NCF5 419 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 BHMTQ93088 406 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 PCMTD2Q9NV79 361 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 NOD1Q9Y239 953 aa5.55□□□□□ -1.52
LINC00428-201ENST00000415620 YBX3P16989 372 aaKnown RBP eCLIP5.54□□□□□ -1.52
LINC00428-201ENST00000415620 HIRAP54198 1017 aaPredicted RBP5.54□□□□□ -1.52
LINC00428-201ENST00000415620 PSME1Q06323 249 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 SH3PXD2AQ5TCZ1 1133 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms