RNA–Protein interactions for RNA: ENST00000409908.5

MDH1-203, Transcript of malate dehydrogenase 1, humanhuman

TSL 3 BASIC

Gene MDH1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-203ENST00000409908 MTFR1LQ9H019 292 aa14.02□□□□□ -0.17
MDH1-203ENST00000409908 UBR3Q6ZT12 1888 aa14.01□□□□□ -0.17
MDH1-203ENST00000409908 SOS1Q07889 1333 aaPredicted RBP14.01□□□□□ -0.17
MDH1-203ENST00000409908 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
MDH1-203ENST00000409908 PTGER2P43116 358 aa14.01□□□□□ -0.17
MDH1-203ENST00000409908 HNRNPUQ00839 825 aaKnown RBP eCLIP14.01□□□□□ -0.17
MDH1-203ENST00000409908 EXOSC9Q06265 439 aaKnown RBP14.01□□□□□ -0.17
MDH1-203ENST00000409908 FKBP8Q14318 412 aa14.01□□□□□ -0.17
MDH1-203ENST00000409908 PROSER3Q2NL68 480 aa14.01□□□□□ -0.17
MDH1-203ENST00000409908 BABAM1Q9NWV8 329 aa14.01□□□□□ -0.17
MDH1-203ENST00000409908 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
MDH1-203ENST00000409908 GALR2O43603 387 aaPredicted RBP14□□□□□ -0.17
MDH1-203ENST00000409908 GYS1P13807 737 aa14□□□□□ -0.17
MDH1-203ENST00000409908 TTLL7Q6ZT98 887 aa14□□□□□ -0.17
MDH1-203ENST00000409908 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
MDH1-203ENST00000409908 SLC16A10Q8TF71 515 aa14□□□□□ -0.17
MDH1-203ENST00000409908 CREBZFQ9NS37 354 aa14□□□□□ -0.17
MDH1-203ENST00000409908 KDM3BQ7LBC6 1761 aa14□□□□□ -0.17
MDH1-203ENST00000409908 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
MDH1-203ENST00000409908 FAM177BA6PVY3 158 aa13.99□□□□□ -0.17
MDH1-203ENST00000409908 POLD1P28340 1107 aa13.99□□□□□ -0.17
MDH1-203ENST00000409908 IL6STP40189 918 aaPredicted RBP13.99□□□□□ -0.17
MDH1-203ENST00000409908 CCDC24Q8N4L8 307 aa13.99□□□□□ -0.17
MDH1-203ENST00000409908 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
MDH1-203ENST00000409908 BCL2L12Q9HB09 334 aa13.99□□□□□ -0.17
MDH1-203ENST00000409908 WWC3Q9ULE0 1092 aa13.99□□□□□ -0.17
MDH1-203ENST00000409908 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
MDH1-203ENST00000409908 PDIA6Q15084 440 aa13.98□□□□□ -0.17
MDH1-203ENST00000409908 HLFQ16534 295 aa13.98□□□□□ -0.17
MDH1-203ENST00000409908 HDGFL1Q5TGJ6 251 aa13.98□□□□□ -0.17
MDH1-203ENST00000409908 CHPF2Q9P2E5 772 aa13.98□□□□□ -0.17
MDH1-203ENST00000409908 NARFQ9UHQ1 456 aa13.98□□□□□ -0.17
MDH1-203ENST00000409908 CASZ1Q86V15 1759 aa13.97□□□□□ -0.17
MDH1-203ENST00000409908 MMP10P09238 476 aa13.97□□□□□ -0.17
MDH1-203ENST00000409908 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
MDH1-203ENST00000409908 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
MDH1-203ENST00000409908 NLGN1Q8N2Q7 840 aa13.97□□□□□ -0.17
MDH1-203ENST00000409908 ZBTB3Q9H5J0 574 aa13.97□□□□□ -0.17
MDH1-203ENST00000409908 PHAXQ9H814 394 aaKnown RBP13.97□□□□□ -0.17
MDH1-203ENST00000409908 COL15A1P39059 1388 aa13.96□□□□□ -0.17
MDH1-203ENST00000409908 FANCIQ9NVI1 1328 aa13.96□□□□□ -0.17
MDH1-203ENST00000409908 A0A087WZG4 1122 aa13.96□□□□□ -0.17
MDH1-203ENST00000409908 TBC1D9BQ66K14 1250 aa13.96□□□□□ -0.17
MDH1-203ENST00000409908 XAGE3Q8WTP9 111 aa13.96□□□□□ -0.17
MDH1-203ENST00000409908 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
MDH1-203ENST00000409908 IL16Q14005 1332 aa13.95□□□□□ -0.18
MDH1-203ENST00000409908 USP42Q9H9J4 1324 aaKnown RBP13.95□□□□□ -0.18
MDH1-203ENST00000409908 ZNF831Q5JPB2 1677 aa13.95□□□□□ -0.18
MDH1-203ENST00000409908 VAMP4O75379 141 aa13.95□□□□□ -0.18
MDH1-203ENST00000409908 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
MDH1-203ENST00000409908 SLFN5Q08AF3 891 aa13.95□□□□□ -0.18
MDH1-203ENST00000409908 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
MDH1-203ENST00000409908 FHDC1Q9C0D6 1143 aaPredicted RBP13.95□□□□□ -0.18
MDH1-203ENST00000409908 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
MDH1-203ENST00000409908 ZNF521Q96K83 1311 aa13.94□□□□□ -0.18
MDH1-203ENST00000409908 TM4SF1P30408 202 aa13.94□□□□□ -0.18
MDH1-203ENST00000409908 NFIXQ14938 502 aa13.94□□□□□ -0.18
MDH1-203ENST00000409908 G2E3Q7L622 706 aa13.94□□□□□ -0.18
MDH1-203ENST00000409908 GPTP24298 496 aa13.93□□□□□ -0.18
MDH1-203ENST00000409908 DDR1Q08345 913 aa13.93□□□□□ -0.18
MDH1-203ENST00000409908 MYH16Q9H6N6 1097 aa13.93□□□□□ -0.18
MDH1-203ENST00000409908 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.184e-6■□□□□ 11.2
MDH1-203ENST00000409908 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
MDH1-203ENST00000409908 SERPINB2P05120 415 aa13.92□□□□□ -0.18
MDH1-203ENST00000409908 CCDC30Q5VVM6 783 aa13.92□□□□□ -0.18
MDH1-203ENST00000409908 KIF6Q6ZMV9 814 aa13.92□□□□□ -0.18
MDH1-203ENST00000409908 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
MDH1-203ENST00000409908 SYT17Q9BSW7 474 aa13.92□□□□□ -0.18
MDH1-203ENST00000409908 E9PSI1 815 aa13.91□□□□□ -0.18
MDH1-203ENST00000409908 LRP10Q7Z4F1 713 aa13.91□□□□□ -0.18
MDH1-203ENST00000409908 NLGN2Q8NFZ4 835 aa13.91□□□□□ -0.18
MDH1-203ENST00000409908 SETDB2Q96T68 719 aa13.91□□□□□ -0.18
MDH1-203ENST00000409908 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
MDH1-203ENST00000409908 NIP7Q9Y221 180 aaKnown RBP eCLIP13.91□□□□□ -0.18
MDH1-203ENST00000409908 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
MDH1-203ENST00000409908 POTEMA6NI47 508 aa13.9□□□□□ -0.18
MDH1-203ENST00000409908 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
MDH1-203ENST00000409908 NPHP1O15259 732 aa13.9□□□□□ -0.18
MDH1-203ENST00000409908 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
MDH1-203ENST00000409908 MAP3K15Q6ZN16 1313 aa13.9□□□□□ -0.19
MDH1-203ENST00000409908 A0A0G2JLW4 131 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 ATP5J2-PTCD1G3V325 749 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 ANKRD13DQ6ZTN6 518 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 STK31Q9BXU1 1019 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
MDH1-203ENST00000409908 HOXB7P09629 217 aa13.88□□□□□ -0.19
MDH1-203ENST00000409908 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
MDH1-203ENST00000409908 GTF2E1P29083 439 aaPredicted RBP13.87□□□□□ -0.19
MDH1-203ENST00000409908 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
MDH1-203ENST00000409908 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
MDH1-203ENST00000409908 TRMT2AQ8IZ69 625 aaKnown RBP13.87□□□□□ -0.19
MDH1-203ENST00000409908 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
MDH1-203ENST00000409908 CICQ96RK0 1608 aaPredicted RBP13.86□□□□□ -0.19
MDH1-203ENST00000409908 LAMB4A4D0S4 1761 aa13.86□□□□□ -0.19
MDH1-203ENST00000409908 ERVV-1B6SEH8 477 aa13.86□□□□□ -0.19
MDH1-203ENST00000409908 CHRNA5P30532 468 aa13.86□□□□□ -0.19
MDH1-203ENST00000409908 GIGYF2Q6Y7W6 1299 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms