RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 NLGN2Q8NFZ4 835 aa21.15■□□□□ 0.98
TSPAN4-208ENST00000409531 BCL2L12Q9HB09 334 aa21.15■□□□□ 0.98
TSPAN4-208ENST00000409531 DBF4Q9UBU7 674 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-208ENST00000409531 C4AP0C0L4 1744 aa21.15■□□□□ 0.98
TSPAN4-208ENST00000409531 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.97
TSPAN4-208ENST00000409531 RARSP54136 660 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-208ENST00000409531 NECTIN2Q92692 538 aa21.14■□□□□ 0.97
TSPAN4-208ENST00000409531 DDX21Q9NR30 783 aaKnown RBP eCLIP21.13■□□□□ 0.97
TSPAN4-208ENST00000409531 SMC4Q9NTJ3 1288 aa21.13■□□□□ 0.97
TSPAN4-208ENST00000409531 DZIP3Q86Y13 1208 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-208ENST00000409531 DDR1Q08345 913 aa21.11■□□□□ 0.97
TSPAN4-208ENST00000409531 NFIXQ14938 502 aa21.11■□□□□ 0.97
TSPAN4-208ENST00000409531 SSH1Q8WYL5 1049 aa21.11■□□□□ 0.97
TSPAN4-208ENST00000409531 HYPKQ9NX55 129 aa21.11■□□□□ 0.97
TSPAN4-208ENST00000409531 CHPF2Q9P2E5 772 aa21.11■□□□□ 0.97
TSPAN4-208ENST00000409531 POLRMTO00411 1230 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-208ENST00000409531 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
TSPAN4-208ENST00000409531 BRPF1P55201 1214 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-208ENST00000409531 KIF16BQ96L93 1317 aa21.09■□□□□ 0.97
TSPAN4-208ENST00000409531 CAMTA2O94983 1202 aa21.09■□□□□ 0.97
TSPAN4-208ENST00000409531 TCERG1O14776 1098 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-208ENST00000409531 TGFB2P61812 414 aa21.08■□□□□ 0.97
TSPAN4-208ENST00000409531 PDIA6Q15084 440 aa21.08■□□□□ 0.97
TSPAN4-208ENST00000409531 GPR162Q16538 588 aa21.08■□□□□ 0.97
TSPAN4-208ENST00000409531 BCL2L13Q9BXK5 485 aa21.08■□□□□ 0.97
TSPAN4-208ENST00000409531 MYL6BP14649 208 aa21.07■□□□□ 0.96
TSPAN4-208ENST00000409531 CLEC4GQ6UXB4 293 aa21.07■□□□□ 0.96
TSPAN4-208ENST00000409531 MRPL50Q8N5N7 158 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-208ENST00000409531 RGL2O15211 777 aa21.06■□□□□ 0.96
TSPAN4-208ENST00000409531 SERPINB2P05120 415 aa21.06■□□□□ 0.96
TSPAN4-208ENST00000409531 TBC1D9BQ66K14 1250 aa21.06■□□□□ 0.96
TSPAN4-208ENST00000409531 BICDL1Q6ZP65 573 aa21.06■□□□□ 0.96
TSPAN4-208ENST00000409531 BCAR3O75815 825 aa21.05■□□□□ 0.96
TSPAN4-208ENST00000409531 PROSER3Q2NL68 480 aa21.05■□□□□ 0.96
TSPAN4-208ENST00000409531 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-208ENST00000409531 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-208ENST00000409531 PTPRCP08575 1304 aa21.05■□□□□ 0.96
TSPAN4-208ENST00000409531 IPO8O15397 1037 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-208ENST00000409531 ANXA1P04083 346 aa21.04■□□□□ 0.96
TSPAN4-208ENST00000409531 SETDB2Q96T68 719 aa21.04■□□□□ 0.96
TSPAN4-208ENST00000409531 ZNF652Q9Y2D9 606 aa21.04■□□□□ 0.96
TSPAN4-208ENST00000409531 DDX58O95786 925 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-208ENST00000409531 C1QTNF8P60827 252 aa21.04■□□□□ 0.96
TSPAN4-208ENST00000409531 FLIIQ13045 1269 aa21.04■□□□□ 0.96
TSPAN4-208ENST00000409531 C10orf71Q711Q0 1435 aa21.03■□□□□ 0.96
TSPAN4-208ENST00000409531 CHD4Q14839 1912 aa21.03■□□□□ 0.96
TSPAN4-208ENST00000409531 A0A0G2JLW4 131 aa21.03■□□□□ 0.96
TSPAN4-208ENST00000409531 ERVV-1B6SEH8 477 aa21.03■□□□□ 0.96
TSPAN4-208ENST00000409531 LRP10Q7Z4F1 713 aa21.03■□□□□ 0.96
TSPAN4-208ENST00000409531 PHAXQ9H814 394 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-208ENST00000409531 FKBP5Q13451 457 aaPredicted RBP21.02■□□□□ 0.95
TSPAN4-208ENST00000409531 ARHGAP45Q92619 1136 aa21.02■□□□□ 0.95
TSPAN4-208ENST00000409531 FRAT1Q92837 279 aaPredicted RBP21.02■□□□□ 0.95
TSPAN4-208ENST00000409531 GRIN3BO60391 1043 aa21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 DPEP1P16444 411 aa21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 YBX3P16989 372 aaKnown RBP eCLIP21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 AIMP1Q12904 312 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 HLFQ16534 295 aa21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 KIF6Q6ZMV9 814 aa21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 TTLL7Q6ZT98 887 aa21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 XAGE3Q8WTP9 111 aa21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 NOB1Q9ULX3 412 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-208ENST00000409531 MAP3K15Q6ZN16 1313 aa21■□□□□ 0.95
TSPAN4-208ENST00000409531 ZKSCAN2Q63HK3 967 aa21■□□□□ 0.95
TSPAN4-208ENST00000409531 G2E3Q7L622 706 aa21■□□□□ 0.95
TSPAN4-208ENST00000409531 API5Q9BZZ5 524 aaKnown RBP21■□□□□ 0.95
TSPAN4-208ENST00000409531 CARMIL3Q8ND23 1372 aa21■□□□□ 0.95
TSPAN4-208ENST00000409531 UTRNP46939 3433 aa20.99■□□□□ 0.95
TSPAN4-208ENST00000409531 KCNA3P22001 575 aa20.99■□□□□ 0.95
TSPAN4-208ENST00000409531 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
TSPAN4-208ENST00000409531 PXDNLA1KZ92 1463 aa20.99■□□□□ 0.95
TSPAN4-208ENST00000409531 KIF13BQ9NQT8 1826 aa20.98■□□□□ 0.95
TSPAN4-208ENST00000409531 ARFGEF2Q9Y6D5 1785 aa20.98■□□□□ 0.95
TSPAN4-208ENST00000409531 MS4A1P11836 297 aa20.98■□□□□ 0.95
TSPAN4-208ENST00000409531 ATF7IPQ6VMQ6 1270 aa20.98■□□□□ 0.95
TSPAN4-208ENST00000409531 ANKRD13DQ6ZTN6 518 aa20.98■□□□□ 0.95
TSPAN4-208ENST00000409531 SCN7AQ01118 1682 aa20.97■□□□□ 0.95
TSPAN4-208ENST00000409531 PRR5LQ6MZQ0 368 aa20.97■□□□□ 0.95
TSPAN4-208ENST00000409531 KSR2Q6VAB6 950 aa20.97■□□□□ 0.95
TSPAN4-208ENST00000409531 PLBD2Q8NHP8 589 aa20.97■□□□□ 0.95
TSPAN4-208ENST00000409531 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
TSPAN4-208ENST00000409531 WWC3Q9ULE0 1092 aa20.97■□□□□ 0.95
TSPAN4-208ENST00000409531 SUPT16HQ9Y5B9 1047 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-208ENST00000409531 BCORQ6W2J9 1755 aa20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 GOLGB1Q14789 3259 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 NUP98P52948 1817 aa20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 RRP1P56182 461 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 TPTE2Q6XPS3 522 aa20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 BRIP1Q9BX63 1249 aa20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 PIM2Q9P1W9 311 aa20.96■□□□□ 0.95
TSPAN4-208ENST00000409531 PI4KAP2A4QPH2 592 aa20.95■□□□□ 0.94
TSPAN4-208ENST00000409531 NPHP1O15259 732 aa20.95■□□□□ 0.94
TSPAN4-208ENST00000409531 CHRNA5P30532 468 aa20.95■□□□□ 0.94
TSPAN4-208ENST00000409531 GIGYF2Q6Y7W6 1299 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-208ENST00000409531 NBPF5PQ86XG9 351 aaPredicted RBP20.95■□□□□ 0.94
TSPAN4-208ENST00000409531 PI4KAP1Q8N8J0 262 aa20.95■□□□□ 0.94
TSPAN4-208ENST00000409531 CNBD1Q8NA66 436 aa20.95■□□□□ 0.94
TSPAN4-208ENST00000409531 RNF123Q5XPI4 1314 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms