RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C7orf43Q8WVR3 580 aa6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 EDEM1Q92611 657 aa6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 POLIQ9UNA4 740 aa6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 AMOTL2Q9Y2J4 779 aa6.58□□□□□ -1.36
HMGB1P17-201ENST00000403495 RBM47A0AV96 593 aaKnown RBP6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 A6NHS1 94 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 SOBPA7XYQ1 873 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 ST8SIA5O15466 376 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 ATP4AP20648 1035 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 ZAP70P43403 619 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 LYSMD3Q7Z3D4 306 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 TREML1Q86YW5 311 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 GPR152Q8TDT2 470 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 ZFP42Q96MM3 310 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 GPAMQ9HCL2 828 aa6.57□□□□□ -1.36
HMGB1P17-201ENST00000403495 SPATA31C2B4DYI2 1134 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 GPR182O15218 404 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 GFRA3O60609 400 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 AVPP01185 164 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 P4HBP07237 508 aaKnown RBP6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 NBPF1Q3BBV0 1214 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 BICDL1Q6ZP65 573 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 FBXO33Q7Z6M2 555 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 ZSCAN29Q8IWY8 852 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 RGL4Q8IZJ4 473 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 ABTB2Q8N961 1025 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 SETDB2Q96T68 719 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 DACH1Q9UI36 760 aa6.56□□□□□ -1.36
HMGB1P17-201ENST00000403495 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 E9PSI1 815 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 PDGFAP04085 211 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 MSX1P28360 303 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 SCARF1Q14162 830 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 PKDCCQ504Y2 493 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 C1orf53Q5VUE5 145 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 ALKBH2Q6NS38 261 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 LRRC69Q6ZNQ3 347 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 SUSD3Q96L08 255 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 RBCK1Q9BYM8 510 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 TIMMDC1Q9NPL8 285 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 RNF19AQ9NV58 838 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 KIAA1522Q9P206 1035 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 DNMT3LQ9UJW3 386 aa6.55□□□□□ -1.36
HMGB1P17-201ENST00000403495 AXIN1O15169 862 aa6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 MICAL2O94851 1124 aa6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 TATP17735 454 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 ERCC3P19447 782 aa6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 MAPK8P45983 427 aa6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 ARSJQ5FYB0 599 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 NUDT16Q96DE0 195 aaKnown RBP6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 MRRFQ96E11 262 aaKnown RBP6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 ZIC5Q96T25 663 aa6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 NIF3L1Q9GZT8 377 aa6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 RUBCNLQ9H714 662 aa6.54□□□□□ -1.36
HMGB1P17-201ENST00000403495 OPLAHO14841 1288 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 TREHO43280 583 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 IGHA2P01877 340 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 IDH3AP50213 366 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 C8orf34Q49A92 452 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 GAS2L1Q99501 681 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 GGNBP2Q9H3C7 697 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 ZDHHC3Q9NYG2 299 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 WWC3Q9ULE0 1092 aa6.53□□□□□ -1.36
HMGB1P17-201ENST00000403495 A0A1W2PNR3 127 aa6.52□□□□□ -1.37
HMGB1P17-201ENST00000403495 TGFBR3LH3BV60 316 aa6.52□□□□□ -1.37
HMGB1P17-201ENST00000403495 MZF1P28698 734 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P17-201ENST00000403495 EHHADHQ08426 723 aa6.52□□□□□ -1.37
HMGB1P17-201ENST00000403495 EAPPQ56P03 285 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P17-201ENST00000403495 FAM129BQ96TA1 746 aa6.52□□□□□ -1.37
HMGB1P17-201ENST00000403495 DMGDHQ9UI17 866 aaKnown RBP6.52□□□□□ -1.37
HMGB1P17-201ENST00000403495 DGAT1O75907 488 aa6.51□□□□□ -1.37
HMGB1P17-201ENST00000403495 PLCB3Q01970 1234 aa6.51□□□□□ -1.37
HMGB1P17-201ENST00000403495 DSC3Q14574 896 aa6.51□□□□□ -1.37
HMGB1P17-201ENST00000403495 GJD3Q8N144 294 aa6.51□□□□□ -1.37
HMGB1P17-201ENST00000403495 FAM161BQ96MY7 647 aa6.51□□□□□ -1.37
HMGB1P17-201ENST00000403495 SENP3-EIF4A1A0A087X0R7 540 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 A0A1B0GTH6 734 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 NRG2O14511 850 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 RGS20O76081 388 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 GRNP28799 593 aaKnown RBP6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 SMCPP49901 116 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 FMR1Q06787 632 aaKnown RBP eCLIP6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 ORC1Q13415 861 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 TRIP4Q15650 581 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 BTLAQ7Z6A9 289 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 CMTR1Q8N1G2 835 aaKnown RBP6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 IRX2Q9BZI1 471 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 NEUROD4Q9HD90 331 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 ATP13A2Q9NQ11 1180 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 AAASQ9NRG9 546 aa6.5□□□□□ -1.37
HMGB1P17-201ENST00000403495 PNMA6FA0A0J9YX94 578 aa6.49□□□□□ -1.37
HMGB1P17-201ENST00000403495 MAN1A2O60476 641 aa6.49□□□□□ -1.37
HMGB1P17-201ENST00000403495 CTC1Q2NKJ3 1217 aa6.49□□□□□ -1.37
HMGB1P17-201ENST00000403495 ZNF326Q5BKZ1 582 aaKnown RBP6.49□□□□□ -1.37
HMGB1P17-201ENST00000403495 DMRTB1Q96MA1 342 aa6.49□□□□□ -1.37
HMGB1P17-201ENST00000403495 RTCBQ9Y3I0 505 aaKnown RBP6.49□□□□□ -1.37
HMGB1P17-201ENST00000403495 GJA3Q9Y6H8 435 aa6.49□□□□□ -1.37
HMGB1P17-201ENST00000403495 LDHBP07195 334 aaKnown RBP6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 THBS1P07996 1170 aa6.48□□□□□ -1.37
HMGB1P17-201ENST00000403495 INPP5BP32019 993 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms