RNA–Protein interactions for RNA: ENST00000401644.6

SNED1-203, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-203ENST00000401644 SETDB2Q96T68 719 aa17.5■□□□□ 0.39
SNED1-203ENST00000401644 MAP3K15Q6ZN16 1313 aa17.49■□□□□ 0.39
SNED1-203ENST00000401644 FANCIQ9NVI1 1328 aa17.49■□□□□ 0.39
SNED1-203ENST00000401644 GOLGB1Q14789 3259 aaKnown RBP17.49■□□□□ 0.39
SNED1-203ENST00000401644 DDR1Q08345 913 aa17.49■□□□□ 0.39
SNED1-203ENST00000401644 TWISTNBQ3B726 338 aaPredicted RBP17.49■□□□□ 0.39
SNED1-203ENST00000401644 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
SNED1-203ENST00000401644 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
SNED1-203ENST00000401644 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
SNED1-203ENST00000401644 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
SNED1-203ENST00000401644 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 E9PSI1 815 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 SERPINB2P05120 415 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 TTLL7Q6ZT98 887 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 TSPYL6Q8N831 410 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 BCORQ6W2J9 1755 aa17.48■□□□□ 0.39
SNED1-203ENST00000401644 ANXA1P04083 346 aa17.47■□□□□ 0.39
SNED1-203ENST00000401644 YBX3P16989 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNED1-203ENST00000401644 YY1P25490 414 aa17.47■□□□□ 0.39
SNED1-203ENST00000401644 TGFB2P61812 414 aa17.47■□□□□ 0.39
SNED1-203ENST00000401644 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
SNED1-203ENST00000401644 CACNA1FO60840 1977 aa17.47■□□□□ 0.39
SNED1-203ENST00000401644 NUP98P52948 1817 aa17.47■□□□□ 0.39
SNED1-203ENST00000401644 CARMIL3Q8ND23 1372 aa17.46■□□□□ 0.39
SNED1-203ENST00000401644 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.39
SNED1-203ENST00000401644 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.39
SNED1-203ENST00000401644 HLFQ16534 295 aa17.46■□□□□ 0.39
SNED1-203ENST00000401644 GIGYF2Q6Y7W6 1299 aaKnown RBP17.46■□□□□ 0.39
SNED1-203ENST00000401644 XAGE3Q8WTP9 111 aa17.46■□□□□ 0.39
SNED1-203ENST00000401644 STK31Q9BXU1 1019 aa17.46■□□□□ 0.39
SNED1-203ENST00000401644 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
SNED1-203ENST00000401644 ZBTB3Q9H5J0 574 aa17.45■□□□□ 0.38
SNED1-203ENST00000401644 NIP7Q9Y221 180 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNED1-203ENST00000401644 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
SNED1-203ENST00000401644 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
SNED1-203ENST00000401644 VAMP4O75379 141 aa17.44■□□□□ 0.38
SNED1-203ENST00000401644 SLFN5Q08AF3 891 aa17.44■□□□□ 0.38
SNED1-203ENST00000401644 HSP90AB3PQ58FF7 597 aa17.44■□□□□ 0.38
SNED1-203ENST00000401644 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
SNED1-203ENST00000401644 C10orf71Q711Q0 1435 aa17.44■□□□□ 0.38
SNED1-203ENST00000401644 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
SNED1-203ENST00000401644 NPHP1O15259 732 aa17.43■□□□□ 0.38
SNED1-203ENST00000401644 TPTE2Q6XPS3 522 aa17.43■□□□□ 0.38
SNED1-203ENST00000401644 NBPF5PQ86XG9 351 aaPredicted RBP17.43■□□□□ 0.38
SNED1-203ENST00000401644 PLBD2Q8NHP8 589 aa17.43■□□□□ 0.38
SNED1-203ENST00000401644 NRXN2Q9P2S2 1712 aa17.43■□□□□ 0.38
SNED1-203ENST00000401644 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
SNED1-203ENST00000401644 CNBD1Q8NA66 436 aa17.42■□□□□ 0.38
SNED1-203ENST00000401644 NYXQ9GZU5 481 aa17.42■□□□□ 0.38
SNED1-203ENST00000401644 WWC3Q9ULE0 1092 aa17.42■□□□□ 0.38
SNED1-203ENST00000401644 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
SNED1-203ENST00000401644 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
SNED1-203ENST00000401644 DPEP1P16444 411 aa17.41■□□□□ 0.38
SNED1-203ENST00000401644 ST5P78524 1137 aa17.41■□□□□ 0.38
SNED1-203ENST00000401644 PARP10Q53GL7 1025 aa17.41■□□□□ 0.38
SNED1-203ENST00000401644 ZNF34Q8IZ26 560 aa17.41■□□□□ 0.38
SNED1-203ENST00000401644 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
SNED1-203ENST00000401644 HNRNPUQ00839 825 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNED1-203ENST00000401644 TCIRG1Q13488 830 aa17.4■□□□□ 0.38
SNED1-203ENST00000401644 PRR5LQ6MZQ0 368 aa17.4■□□□□ 0.38
SNED1-203ENST00000401644 PPP1R42Q7Z4L9 355 aa17.4■□□□□ 0.38
SNED1-203ENST00000401644 TRMT2AQ8IZ69 625 aaKnown RBP17.4■□□□□ 0.38
SNED1-203ENST00000401644 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
SNED1-203ENST00000401644 PHAXQ9H814 394 aaKnown RBP17.4■□□□□ 0.38
SNED1-203ENST00000401644 PXDNLA1KZ92 1463 aa17.39■□□□□ 0.37
SNED1-203ENST00000401644 KCNA3P22001 575 aa17.39■□□□□ 0.37
SNED1-203ENST00000401644 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
SNED1-203ENST00000401644 PDE6BP35913 854 aa17.39■□□□□ 0.37
SNED1-203ENST00000401644 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
SNED1-203ENST00000401644 GPTP24298 496 aa17.38■□□□□ 0.37
SNED1-203ENST00000401644 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
SNED1-203ENST00000401644 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
SNED1-203ENST00000401644 H0YIN7 160 aa17.37■□□□□ 0.37
SNED1-203ENST00000401644 PIM2Q9P1W9 311 aa17.37■□□□□ 0.37
SNED1-203ENST00000401644 IBTKQ9P2D0 1353 aaPredicted RBP17.37■□□□□ 0.37
SNED1-203ENST00000401644 N4BP2Q86UW6 1770 aaPredicted RBP17.36■□□□□ 0.37
SNED1-203ENST00000401644 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
SNED1-203ENST00000401644 TCERG1O14776 1098 aaKnown RBP17.36■□□□□ 0.37
SNED1-203ENST00000401644 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
SNED1-203ENST00000401644 TRIM28Q13263 835 aaKnown RBP17.36■□□□□ 0.37
SNED1-203ENST00000401644 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
SNED1-203ENST00000401644 UTP14AQ9BVJ6 771 aaKnown RBP17.36■□□□□ 0.37
SNED1-203ENST00000401644 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
SNED1-203ENST00000401644 CHRNA5P30532 468 aa17.35■□□□□ 0.37
SNED1-203ENST00000401644 KSR2Q6VAB6 950 aa17.35■□□□□ 0.37
SNED1-203ENST00000401644 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
SNED1-203ENST00000401644 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
SNED1-203ENST00000401644 UBN2Q6ZU65 1347 aa17.35■□□□□ 0.37
SNED1-203ENST00000401644 FLIIQ13045 1269 aa17.34■□□□□ 0.37
SNED1-203ENST00000401644 ANKRD36CQ5JPF3 1778 aa17.34■□□□□ 0.37
SNED1-203ENST00000401644 NLRP10Q86W26 655 aa17.34■□□□□ 0.37
SNED1-203ENST00000401644 ISCA1Q9BUE6 129 aa17.34■□□□□ 0.37
SNED1-203ENST00000401644 CHD4Q14839 1912 aa17.33■□□□□ 0.37
SNED1-203ENST00000401644 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.37
SNED1-203ENST00000401644 PI4KAP2A4QPH2 592 aa17.33■□□□□ 0.36
SNED1-203ENST00000401644 NTSR2O95665 410 aa17.33■□□□□ 0.36
SNED1-203ENST00000401644 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
SNED1-203ENST00000401644 G2E3Q7L622 706 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms