RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 PDIA6Q15084 440 aa20.25■□□□□ 0.83
ATG4B-202ENST00000400771 PRR5LQ6MZQ0 368 aa20.25■□□□□ 0.83
ATG4B-202ENST00000400771 ANP32CO43423 234 aa20.24■□□□□ 0.83
ATG4B-202ENST00000400771 ZNF853P0CG23 659 aa20.24■□□□□ 0.83
ATG4B-202ENST00000400771 ZNF784Q8NCA9 323 aaPredicted RBP20.24■□□□□ 0.83
ATG4B-202ENST00000400771 HLFQ16534 295 aa20.23■□□□□ 0.83
ATG4B-202ENST00000400771 PROSER3Q2NL68 480 aa20.23■□□□□ 0.83
ATG4B-202ENST00000400771 CLEC4GQ6UXB4 293 aa20.23■□□□□ 0.83
ATG4B-202ENST00000400771 MRS2Q9HD23 443 aa20.23■□□□□ 0.83
ATG4B-202ENST00000400771 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
ATG4B-202ENST00000400771 TTLL7Q6ZT98 887 aa20.22■□□□□ 0.83
ATG4B-202ENST00000400771 BCS1LQ9Y276 419 aa20.22■□□□□ 0.83
ATG4B-202ENST00000400771 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
ATG4B-202ENST00000400771 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
ATG4B-202ENST00000400771 MAP3K15Q6ZN16 1313 aa20.21■□□□□ 0.83
ATG4B-202ENST00000400771 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
ATG4B-202ENST00000400771 MYL6BP14649 208 aa20.2■□□□□ 0.82
ATG4B-202ENST00000400771 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.82
ATG4B-202ENST00000400771 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
ATG4B-202ENST00000400771 ANXA1P04083 346 aa20.19■□□□□ 0.82
ATG4B-202ENST00000400771 CNBD1Q8NA66 436 aa20.19■□□□□ 0.82
ATG4B-202ENST00000400771 SETDB2Q96T68 719 aa20.19■□□□□ 0.82
ATG4B-202ENST00000400771 PIM2Q9P1W9 311 aa20.19■□□□□ 0.82
ATG4B-202ENST00000400771 ZNF652Q9Y2D9 606 aa20.19■□□□□ 0.82
ATG4B-202ENST00000400771 ABCC12Q96J65 1359 aa20.19■□□□□ 0.82
ATG4B-202ENST00000400771 IFT57Q9NWB7 429 aa20.18■□□□□ 0.82
ATG4B-202ENST00000400771 LAS1LQ9Y4W2 734 aaKnown RBP20.18■□□□□ 0.82
ATG4B-202ENST00000400771 UBN2Q6ZU65 1347 aa20.18■□□□□ 0.82
ATG4B-202ENST00000400771 IBTKQ9P2D0 1353 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-202ENST00000400771 RIC1Q4ADV7 1423 aa20.18■□□□□ 0.82
ATG4B-202ENST00000400771 ERVV-1B6SEH8 477 aa20.17■□□□□ 0.82
ATG4B-202ENST00000400771 HOXB7P09629 217 aa20.17■□□□□ 0.82
ATG4B-202ENST00000400771 EIF2S2P20042 333 aaKnown RBP20.17■□□□□ 0.82
ATG4B-202ENST00000400771 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
ATG4B-202ENST00000400771 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
ATG4B-202ENST00000400771 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
ATG4B-202ENST00000400771 CACNA1FO60840 1977 aa20.16■□□□□ 0.82
ATG4B-202ENST00000400771 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
ATG4B-202ENST00000400771 DALRD3Q5D0E6 543 aaKnown RBP20.16■□□□□ 0.82
ATG4B-202ENST00000400771 C2CD5Q86YS7 1000 aa20.16■□□□□ 0.82
ATG4B-202ENST00000400771 ZBTB3Q9H5J0 574 aa20.16■□□□□ 0.82
ATG4B-202ENST00000400771 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
ATG4B-202ENST00000400771 NECTIN2Q92692 538 aa20.15■□□□□ 0.82
ATG4B-202ENST00000400771 KIF6Q6ZMV9 814 aa20.14■□□□□ 0.81
ATG4B-202ENST00000400771 NBPF5PQ86XG9 351 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-202ENST00000400771 CHPF2Q9P2E5 772 aa20.14■□□□□ 0.81
ATG4B-202ENST00000400771 GNAI1P63096 354 aa20.13■□□□□ 0.81
ATG4B-202ENST00000400771 GIGYF2Q6Y7W6 1299 aaKnown RBP20.13■□□□□ 0.81
ATG4B-202ENST00000400771 DDX21Q9NR30 783 aaKnown RBP eCLIP20.13■□□□□ 0.81
ATG4B-202ENST00000400771 ST5P78524 1137 aa20.12■□□□□ 0.81
ATG4B-202ENST00000400771 HDGFL1Q5TGJ6 251 aa20.12■□□□□ 0.81
ATG4B-202ENST00000400771 DUSP27Q5VZP5 1158 aa20.12■□□□□ 0.81
ATG4B-202ENST00000400771 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
ATG4B-202ENST00000400771 ZNF34Q8IZ26 560 aa20.12■□□□□ 0.81
ATG4B-202ENST00000400771 TAF1P21675 1872 aa20.11■□□□□ 0.81
ATG4B-202ENST00000400771 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
ATG4B-202ENST00000400771 H0YIN7 160 aa20.11■□□□□ 0.81
ATG4B-202ENST00000400771 SRGNP10124 158 aa20.11■□□□□ 0.81
ATG4B-202ENST00000400771 PDE6BP35913 854 aa20.11■□□□□ 0.81
ATG4B-202ENST00000400771 CALD1Q05682 793 aaKnown RBP20.11■□□□□ 0.81
ATG4B-202ENST00000400771 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
ATG4B-202ENST00000400771 NTSR2O95665 410 aa20.1■□□□□ 0.81
ATG4B-202ENST00000400771 GPTP24298 496 aa20.1■□□□□ 0.81
ATG4B-202ENST00000400771 PRELPP51888 382 aa20.1■□□□□ 0.81
ATG4B-202ENST00000400771 TTLL6Q8N841 843 aa20.1■□□□□ 0.81
ATG4B-202ENST00000400771 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
ATG4B-202ENST00000400771 PDZRN3Q9UPQ7 1066 aa20.1■□□□□ 0.81
ATG4B-202ENST00000400771 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
ATG4B-202ENST00000400771 FAM177BA6PVY3 158 aa20.09■□□□□ 0.81
ATG4B-202ENST00000400771 ARHGAP27Q6ZUM4 889 aa20.09■□□□□ 0.81
ATG4B-202ENST00000400771 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
ATG4B-202ENST00000400771 C8orf58Q8NAV2 365 aa20.09■□□□□ 0.81
ATG4B-202ENST00000400771 LRRC37AA6NMS7 1700 aa20.08■□□□□ 0.81
ATG4B-202ENST00000400771 RASSF7Q02833 373 aa20.08■□□□□ 0.81
ATG4B-202ENST00000400771 SUSD4Q5VX71 490 aa20.08■□□□□ 0.81
ATG4B-202ENST00000400771 STYK1Q6J9G0 422 aa20.08■□□□□ 0.81
ATG4B-202ENST00000400771 NUTM1Q86Y26 1132 aa20.08■□□□□ 0.81
ATG4B-202ENST00000400771 TSR2Q969E8 191 aaKnown RBP20.08■□□□□ 0.81
ATG4B-202ENST00000400771 IL16Q14005 1332 aa20.07■□□□□ 0.8
ATG4B-202ENST00000400771 NFKBIEO00221 500 aa20.07■□□□□ 0.8
ATG4B-202ENST00000400771 TPTE2Q6XPS3 522 aa20.07■□□□□ 0.8
ATG4B-202ENST00000400771 COL4A1P02462 1669 aa20.07■□□□□ 0.8
ATG4B-202ENST00000400771 NPHP1O15259 732 aa20.06■□□□□ 0.8
ATG4B-202ENST00000400771 CRY2Q49AN0 593 aa20.06■□□□□ 0.8
ATG4B-202ENST00000400771 ERFEQ4G0M1 354 aa20.06■□□□□ 0.8
ATG4B-202ENST00000400771 TSPYL6Q8N831 410 aa20.06■□□□□ 0.8
ATG4B-202ENST00000400771 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■□□□ 11.8
ATG4B-202ENST00000400771 DBF4Q9UBU7 674 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-202ENST00000400771 MYH3P11055 1940 aa20.06■□□□□ 0.8
ATG4B-202ENST00000400771 AIMP1Q12904 312 aaKnown RBP20.05■□□□□ 0.8
ATG4B-202ENST00000400771 PRPF40BQ6NWY9 871 aaKnown RBP20.05■□□□□ 0.8
ATG4B-202ENST00000400771 MASTLQ96GX5 879 aa20.05■□□□□ 0.8
ATG4B-202ENST00000400771 NYXQ9GZU5 481 aa20.05■□□□□ 0.8
ATG4B-202ENST00000400771 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
ATG4B-202ENST00000400771 C9orf131Q5VYM1 1079 aa20.04■□□□□ 0.8
ATG4B-202ENST00000400771 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
ATG4B-202ENST00000400771 PARP10Q53GL7 1025 aa20.03■□□□□ 0.8
ATG4B-202ENST00000400771 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
ATG4B-202ENST00000400771 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
ATG4B-202ENST00000400771 C7orf43Q8WVR3 580 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms