RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 CATIPQ7Z7H3 387 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
TNRC18-203ENST00000399537 PRPF4BQ13523 1007 aaKnown RBP16.61■□□□□ 0.25
TNRC18-203ENST00000399537 ABCC11Q96J66 1382 aa16.61■□□□□ 0.25
TNRC18-203ENST00000399537 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
TNRC18-203ENST00000399537 TRMT1Q9NXH9 659 aaKnown RBP16.6■□□□□ 0.25
TNRC18-203ENST00000399537 GTF2F1P35269 517 aaKnown RBP eCLIP16.6■□□□□ 0.253e-7■■■■■ 33.8
TNRC18-203ENST00000399537 FSIP1Q8NA03 581 aa16.6■□□□□ 0.25
TNRC18-203ENST00000399537 PABPN1LA6NDY0 278 aaKnown RBP16.6■□□□□ 0.25
TNRC18-203ENST00000399537 ADCY5O95622 1261 aa16.6■□□□□ 0.25
TNRC18-203ENST00000399537 SPECC1LQ69YQ0 1117 aa16.6■□□□□ 0.25
TNRC18-203ENST00000399537 TMEM87AQ8NBN3 555 aa16.6■□□□□ 0.25
TNRC18-203ENST00000399537 TMC6Q7Z403 805 aa16.6■□□□□ 0.25
TNRC18-203ENST00000399537 IKBKGQ9Y6K9 419 aa16.6■□□□□ 0.25
TNRC18-203ENST00000399537 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
TNRC18-203ENST00000399537 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
TNRC18-203ENST00000399537 PUF60Q9UHX1 559 aaKnown RBP16.59■□□□□ 0.25
TNRC18-203ENST00000399537 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
TNRC18-203ENST00000399537 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
TNRC18-203ENST00000399537 NEMFO60524 1076 aa16.59■□□□□ 0.25
TNRC18-203ENST00000399537 FCHSD2O94868 740 aa16.59■□□□□ 0.25
TNRC18-203ENST00000399537 CCDC40Q4G0X9 1142 aa16.59■□□□□ 0.25
TNRC18-203ENST00000399537 DDX23Q9BUQ8 820 aaKnown RBP16.59■□□□□ 0.25
TNRC18-203ENST00000399537 HOMER2Q9NSB8 354 aa16.59■□□□□ 0.25
TNRC18-203ENST00000399537 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
TNRC18-203ENST00000399537 CNNM3Q8NE01 707 aa16.59■□□□□ 0.25
TNRC18-203ENST00000399537 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.25
TNRC18-203ENST00000399537 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.25
TNRC18-203ENST00000399537 MAP3K12Q12852 859 aa16.58■□□□□ 0.25
TNRC18-203ENST00000399537 GSDMDP57764 484 aa16.58■□□□□ 0.24
TNRC18-203ENST00000399537 DUSP27Q5VZP5 1158 aa16.58■□□□□ 0.24
TNRC18-203ENST00000399537 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
TNRC18-203ENST00000399537 NAIPQ13075 1403 aa16.58■□□□□ 0.24
TNRC18-203ENST00000399537 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
TNRC18-203ENST00000399537 CPLX3Q8WVH0 158 aa16.58■□□□□ 0.24
TNRC18-203ENST00000399537 SYCP3Q8IZU3 236 aa16.58■□□□□ 0.24
TNRC18-203ENST00000399537 SREK1Q8WXA9 508 aaKnown RBP16.58■□□□□ 0.24
TNRC18-203ENST00000399537 C6orf163Q5TEZ5 329 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
TNRC18-203ENST00000399537 KIF20AO95235 890 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 CALML4Q96GE6 196 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 GUCY1B3Q02153 619 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
TNRC18-203ENST00000399537 WDR78Q5VTH9 848 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 FERMT1Q9BQL6 677 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
TNRC18-203ENST00000399537 GOLGA8AA7E2F4 631 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
TNRC18-203ENST00000399537 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 PIP4K2BP78356 416 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 RNF41Q9H4P4 317 aaPredicted RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 PRG4Q92954 1404 aaPredicted RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 SERPINA10Q9UK55 444 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 WDHD1O75717 1129 aaPredicted RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 BAG4O95429 457 aaKnown RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 LMAN1P49257 510 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 MRPS9P82933 396 aaKnown RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 THEMISQ8N1K5 641 aaPredicted RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 CCDC82Q8N4S0 544 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 BIN1O00499 593 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 KIF5BP33176 963 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
TNRC18-203ENST00000399537 CCDC12Q8WUD4 166 aaPredicted RBP16.56■□□□□ 0.24
TNRC18-203ENST00000399537 MYD88Q99836 296 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 CTTNBP2Q8WZ74 1663 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 TMCO5BA8MYB1 307 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
TNRC18-203ENST00000399537 MCM10Q7L590 875 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 EHBP1Q8NDI1 1231 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 NLRP5P59047 1200 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 ALDH1L2Q3SY69 923 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 TCERG1LQ5VWI1 586 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 NCOA1Q15788 1441 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
TNRC18-203ENST00000399537 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 SSX2IPQ9Y2D8 614 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
TNRC18-203ENST00000399537 ZNF444Q8N0Y2 327 aaPredicted RBP16.55■□□□□ 0.24
TNRC18-203ENST00000399537 SYNCQ9H7C4 482 aa16.55■□□□□ 0.24
TNRC18-203ENST00000399537 A0A1W2PRG0 241 aa16.54■□□□□ 0.24
TNRC18-203ENST00000399537 GPATCH11Q8N954 259 aa16.54■□□□□ 0.24
TNRC18-203ENST00000399537 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
TNRC18-203ENST00000399537 NESP48681 1621 aa16.54■□□□□ 0.24
TNRC18-203ENST00000399537 BICD1Q96G01 975 aa16.54■□□□□ 0.24
TNRC18-203ENST00000399537 STXBP4Q6ZWJ1 553 aa16.54■□□□□ 0.24
TNRC18-203ENST00000399537 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
TNRC18-203ENST00000399537 TBC1D5Q92609 795 aa16.54■□□□□ 0.24
TNRC18-203ENST00000399537 IFIT3O14879 490 aaKnown RBP16.54■□□□□ 0.24
TNRC18-203ENST00000399537 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
TNRC18-203ENST00000399537 AMPD3Q01432 767 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 HSF2BPO75031 334 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 PRC1O43663 620 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms