RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 CHL1O00533 1208 aa18.2■□□□□ 0.5
SEC13-204ENST00000397099 NPHP1O15259 732 aa18.2■□□□□ 0.5
SEC13-204ENST00000397099 RRP7AQ9Y3A4 280 aaKnown RBP18.2■□□□□ 0.5
SEC13-204ENST00000397099 PIP4K2AP48426 406 aaPredicted RBP18.19■□□□□ 0.5
SEC13-204ENST00000397099 ST5P78524 1137 aa18.19■□□□□ 0.5
SEC13-204ENST00000397099 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
SEC13-204ENST00000397099 KIF6Q6ZMV9 814 aa18.19■□□□□ 0.5
SEC13-204ENST00000397099 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
SEC13-204ENST00000397099 CNBD1Q8NA66 436 aa18.19■□□□□ 0.5
SEC13-204ENST00000397099 HOXB7P09629 217 aa18.18■□□□□ 0.5
SEC13-204ENST00000397099 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
SEC13-204ENST00000397099 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
SEC13-204ENST00000397099 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
SEC13-204ENST00000397099 TPTE2Q6XPS3 522 aa18.17■□□□□ 0.5
SEC13-204ENST00000397099 RNF181Q9P0P0 153 aa18.17■□□□□ 0.5
SEC13-204ENST00000397099 APAF1O14727 1248 aa18.16■□□□□ 0.5
SEC13-204ENST00000397099 PRR5LQ6MZQ0 368 aa18.16■□□□□ 0.5
SEC13-204ENST00000397099 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
SEC13-204ENST00000397099 CCDC24Q8N4L8 307 aa18.16■□□□□ 0.5
SEC13-204ENST00000397099 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
SEC13-204ENST00000397099 MAP3K15Q6ZN16 1313 aa18.16■□□□□ 0.5
SEC13-204ENST00000397099 NUP98P52948 1817 aa18.16■□□□□ 0.5
SEC13-204ENST00000397099 GNAI1P63096 354 aa18.15■□□□□ 0.5
SEC13-204ENST00000397099 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
SEC13-204ENST00000397099 IFT57Q9NWB7 429 aa18.15■□□□□ 0.5
SEC13-204ENST00000397099 NIP7Q9Y221 180 aaKnown RBP eCLIP18.15■□□□□ 0.5
SEC13-204ENST00000397099 ANKRD31Q8N7Z5 1873 aa18.14■□□□□ 0.49
SEC13-204ENST00000397099 ZNF622Q969S3 477 aaKnown RBP eCLIP18.14■□□□□ 0.49
SEC13-204ENST00000397099 MRS2Q9HD23 443 aa18.14■□□□□ 0.49
SEC13-204ENST00000397099 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
SEC13-204ENST00000397099 KIF3CO14782 793 aa18.13■□□□□ 0.49
SEC13-204ENST00000397099 MYL6BP14649 208 aa18.13■□□□□ 0.49
SEC13-204ENST00000397099 RASSF7Q02833 373 aa18.13■□□□□ 0.49
SEC13-204ENST00000397099 IBTKQ9P2D0 1353 aaPredicted RBP18.13■□□□□ 0.49
SEC13-204ENST00000397099 EIF2S2P20042 333 aaKnown RBP18.12■□□□□ 0.49
SEC13-204ENST00000397099 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
SEC13-204ENST00000397099 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
SEC13-204ENST00000397099 STYK1Q6J9G0 422 aa18.11■□□□□ 0.49
SEC13-204ENST00000397099 NGEFQ8N5V2 710 aa18.11■□□□□ 0.49
SEC13-204ENST00000397099 CNKSR1Q969H4 720 aa18.11■□□□□ 0.49
SEC13-204ENST00000397099 NMRK2Q9NPI5 230 aa18.11■□□□□ 0.49
SEC13-204ENST00000397099 DDX21Q9NR30 783 aaKnown RBP eCLIP18.11■□□□□ 0.493e-7■■■□□ 17.1
SEC13-204ENST00000397099 KDM2BQ8NHM5 1336 aa18.1■□□□□ 0.49
SEC13-204ENST00000397099 GTF2E1P29083 439 aaPredicted RBP18.1■□□□□ 0.49
SEC13-204ENST00000397099 HLFQ16534 295 aa18.1■□□□□ 0.49
SEC13-204ENST00000397099 PARP10Q53GL7 1025 aa18.1■□□□□ 0.49
SEC13-204ENST00000397099 HSP90AB3PQ58FF7 597 aa18.1■□□□□ 0.49
SEC13-204ENST00000397099 SOGA3Q5TF21 947 aa18.1■□□□□ 0.49
SEC13-204ENST00000397099 GIGYF2Q6Y7W6 1299 aaKnown RBP18.1■□□□□ 0.49
SEC13-204ENST00000397099 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
SEC13-204ENST00000397099 MASTLQ96GX5 879 aa18.1■□□□□ 0.49
SEC13-204ENST00000397099 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
SEC13-204ENST00000397099 ARFGEF2Q9Y6D5 1785 aa18.09■□□□□ 0.49
SEC13-204ENST00000397099 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
SEC13-204ENST00000397099 SRGNP10124 158 aa18.09■□□□□ 0.49
SEC13-204ENST00000397099 HSPA6P17066 643 aa18.09■□□□□ 0.49
SEC13-204ENST00000397099 PDIA6Q15084 440 aa18.09■□□□□ 0.49
SEC13-204ENST00000397099 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
SEC13-204ENST00000397099 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
SEC13-204ENST00000397099 DBF4Q9UBU7 674 aaPredicted RBP18.09■□□□□ 0.49
SEC13-204ENST00000397099 ZC3H4Q9UPT8 1303 aaKnown RBP18.08■□□□□ 0.49
SEC13-204ENST00000397099 KLRG2A4D1S0 409 aaPredicted RBP18.08■□□□□ 0.48
SEC13-204ENST00000397099 LMNB1P20700 586 aa18.08■□□□□ 0.48
SEC13-204ENST00000397099 LRP10Q7Z4F1 713 aa18.08■□□□□ 0.48
SEC13-204ENST00000397099 PPP1R42Q7Z4L9 355 aa18.08■□□□□ 0.48
SEC13-204ENST00000397099 MBIPQ9NS73 344 aa18.08■□□□□ 0.48
SEC13-204ENST00000397099 RIC1Q4ADV7 1423 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 COL11A2P13942 1736 aaPredicted RBP18.07■□□□□ 0.48
SEC13-204ENST00000397099 FAM177BA6PVY3 158 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 TOMM70O94826 608 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 NPR1P16066 1061 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 ZBTB3Q9H5J0 574 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 HYPKQ9NX55 129 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 SBF1O95248 1867 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
SEC13-204ENST00000397099 IL16Q14005 1332 aa18.06■□□□□ 0.48
SEC13-204ENST00000397099 C21orf2O43822 256 aa18.06■□□□□ 0.48
SEC13-204ENST00000397099 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
SEC13-204ENST00000397099 CCDC184Q52MB2 194 aa18.06■□□□□ 0.48
SEC13-204ENST00000397099 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
SEC13-204ENST00000397099 ZNF34Q8IZ26 560 aa18.06■□□□□ 0.48
SEC13-204ENST00000397099 CEP350Q5VT06 3117 aa18.05■□□□□ 0.48
SEC13-204ENST00000397099 COPS6Q7L5N1 327 aa18.05■□□□□ 0.48
SEC13-204ENST00000397099 NFKBIEO00221 500 aa18.04■□□□□ 0.48
SEC13-204ENST00000397099 RRAGCQ9HB90 399 aa18.04■□□□□ 0.48
SEC13-204ENST00000397099 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
SEC13-204ENST00000397099 PRPF40BQ6NWY9 871 aaKnown RBP18.03■□□□□ 0.48
SEC13-204ENST00000397099 WWC1Q8IX03 1113 aa18.03■□□□□ 0.48
SEC13-204ENST00000397099 XAGE3Q8WTP9 111 aa18.03■□□□□ 0.48
SEC13-204ENST00000397099 CHPF2Q9P2E5 772 aa18.03■□□□□ 0.48
SEC13-204ENST00000397099 FER1L6Q2WGJ9 1857 aa18.03■□□□□ 0.48
SEC13-204ENST00000397099 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
SEC13-204ENST00000397099 PRELPP51888 382 aa18.02■□□□□ 0.48
SEC13-204ENST00000397099 CACNA1SQ13698 1873 aa18.02■□□□□ 0.48
SEC13-204ENST00000397099 KRT24Q2M2I5 525 aa18.02■□□□□ 0.48
SEC13-204ENST00000397099 CRY2Q49AN0 593 aa18.02■□□□□ 0.48
SEC13-204ENST00000397099 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.48
SEC13-204ENST00000397099 NECTIN2Q92692 538 aa18.02■□□□□ 0.48
SEC13-204ENST00000397099 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
SEC13-204ENST00000397099 SLX4Q8IY92 1834 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms