RNA–Protein interactions for RNA: ENST00000395290.6

CELF1-204, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CELF1, Length 7,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-204ENST00000395290 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
CELF1-204ENST00000395290 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
CELF1-204ENST00000395290 MYO1BO43795 1136 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 SH2D4BQ5SQS7 431 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 B4GALNT4Q76KP1 1039 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 CTAGE9A4FU28 777 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 TUBB4BP68371 445 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 CFAP157Q5JU67 520 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 AACSQ86V21 672 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
CELF1-204ENST00000395290 TBC1D5Q92609 795 aa13.62□□□□□ -0.23
CELF1-204ENST00000395290 INTS8Q75QN2 995 aaKnown RBP13.62□□□□□ -0.23
CELF1-204ENST00000395290 ATP2A1O14983 1001 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 FLIIQ13045 1269 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 CARMIL2Q6F5E8 1435 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 CEP128Q6ZU80 1094 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 NUF2Q9BZD4 464 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 PPP1R12CQ9BZL4 782 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 VCXQ9H320 206 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 AMPD3Q01432 767 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 CCDC170Q8IYT3 715 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 C8orf76Q96K31 380 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 SH3BP5O60239 455 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 USH1CQ9Y6N9 552 aa13.61□□□□□ -0.23
CELF1-204ENST00000395290 PRPHP41219 470 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 MAP7Q14244 749 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 NEDD9Q14511 834 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.6□□□□□ -0.232e-7■□□□□ 10.8
CELF1-204ENST00000395290 TSNAXIP1Q2TAA8 658 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 SPTY2D1Q68D10 685 aaPredicted RBP13.6□□□□□ -0.23
CELF1-204ENST00000395290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.234e-8■■■■□ 20.1
CELF1-204ENST00000395290 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
CELF1-204ENST00000395290 FAM76AQ8TAV0 307 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.232e-8■■■■■ 33.8
CELF1-204ENST00000395290 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
CELF1-204ENST00000395290 CCDC18Q5T9S5 1454 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 KRT13P13646 458 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 ZBTB17Q13105 803 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 GSTA5Q7RTV2 222 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 FERMT3Q86UX7 667 aa13.6□□□□□ -0.23
CELF1-204ENST00000395290 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
CELF1-204ENST00000395290 PPFIA2O75334 1257 aa13.59□□□□□ -0.23
CELF1-204ENST00000395290 FSIP1Q8NA03 581 aa13.59□□□□□ -0.23
CELF1-204ENST00000395290 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
CELF1-204ENST00000395290 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
CELF1-204ENST00000395290 CCDC196A0A1B0GTZ2 297 aa13.59□□□□□ -0.23
CELF1-204ENST00000395290 CYLC1P35663 651 aaPredicted RBP13.59□□□□□ -0.23
CELF1-204ENST00000395290 TCERG1LQ5VWI1 586 aa13.59□□□□□ -0.23
CELF1-204ENST00000395290 ZNF287Q9HBT7 754 aa13.59□□□□□ -0.23
CELF1-204ENST00000395290 ERCC6LQ2NKX8 1250 aa13.59□□□□□ -0.23
CELF1-204ENST00000395290 ZSCAN29Q8IWY8 852 aaPredicted RBP13.59□□□□□ -0.23
CELF1-204ENST00000395290 PYM1Q9BRP8 204 aaKnown RBP13.59□□□□□ -0.23
CELF1-204ENST00000395290 KANK3Q6NY19 840 aa13.58□□□□□ -0.23
CELF1-204ENST00000395290 GAS2L2Q8NHY3 880 aa13.58□□□□□ -0.23
CELF1-204ENST00000395290 KCNK9Q9NPC2 374 aa13.58□□□□□ -0.23
CELF1-204ENST00000395290 MGEA5O60502 916 aa13.58□□□□□ -0.24
CELF1-204ENST00000395290 CAVIN2O95810 425 aa13.58□□□□□ -0.24
CELF1-204ENST00000395290 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
CELF1-204ENST00000395290 STXBP4Q6ZWJ1 553 aa13.58□□□□□ -0.24
CELF1-204ENST00000395290 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
CELF1-204ENST00000395290 CALML4Q96GE6 196 aa13.58□□□□□ -0.24
CELF1-204ENST00000395290 OGFRQ9NZT2 677 aa13.58□□□□□ -0.24
CELF1-204ENST00000395290 A0A087WZG4 1122 aa13.58□□□□□ -0.24
CELF1-204ENST00000395290 SMAP1Q8IYB5 467 aaPredicted RBP13.58□□□□□ -0.24
CELF1-204ENST00000395290 ARFGAP2Q8N6H7 521 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 TTC21AQ8NDW8 1320 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 SNX16P57768 344 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
CELF1-204ENST00000395290 VPS52Q8N1B4 723 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 SSRP1Q08945 709 aaKnown RBP13.57□□□□□ -0.24
CELF1-204ENST00000395290 NOLC1Q14978 699 aaKnown RBP eCLIP13.57□□□□□ -0.24
CELF1-204ENST00000395290 RGS22Q8NE09 1264 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 KIAA1524Q8TCG1 905 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 MPHOSPH8Q99549 860 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 PHLDB2Q86SQ0 1253 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 CTAGE1Q96RT6 745 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 ATP2A2P16615 1042 aaKnown RBP13.57□□□□□ -0.24
CELF1-204ENST00000395290 FAM160A1Q05DH4 1040 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 DNAI1Q9UI46 699 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
CELF1-204ENST00000395290 ZNF365Q70YC5 407 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 FMNL3Q8IVF7 1028 aa13.57□□□□□ -0.24
CELF1-204ENST00000395290 MIER3Q7Z3K6 550 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 WHAMMP3Q1A5X7 153 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 HDXQ7Z353 690 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 SYCP3Q8IZU3 236 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 CTCFLQ8NI51 663 aaPredicted RBP13.56□□□□□ -0.24
CELF1-204ENST00000395290 TXNDC16Q9P2K2 825 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 MRVI1Q9Y6F6 885 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 CUX2O14529 1486 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 BIN1O00499 593 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 UBASH3AP57075 661 aa13.56□□□□□ -0.24
CELF1-204ENST00000395290 GKAP1Q5VSY0 366 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms