RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 AHDC1Q5TGY3 1603 aaPredicted RBP13.78□□□□□ -0.2
PDCD4-202ENST00000393104 GIMAP6Q6P9H5 292 aa13.78□□□□□ -0.2
PDCD4-202ENST00000393104 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
PDCD4-202ENST00000393104 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.2
PDCD4-202ENST00000393104 SGSM2O43147 1006 aa13.77□□□□□ -0.2
PDCD4-202ENST00000393104 LRRCC1Q9C099 1032 aa13.77□□□□□ -0.2
PDCD4-202ENST00000393104 MTMR6Q9Y217 621 aa13.77□□□□□ -0.2
PDCD4-202ENST00000393104 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.2
PDCD4-202ENST00000393104 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 KCNB2Q92953 911 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 ANO2Q9NQ90 1003 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 ADAMTS7Q9UKP4 1686 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 PXDNLA1KZ92 1463 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 CBX1P83916 185 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 POLA2Q14181 598 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.21
PDCD4-202ENST00000393104 ERBB3P21860 1342 aa13.76□□□□□ -0.21
PDCD4-202ENST00000393104 PPP4R3BQ5MIZ7 849 aa13.76□□□□□ -0.21
PDCD4-202ENST00000393104 WDR33Q9C0J8 1336 aaKnown RBP13.76□□□□□ -0.21
PDCD4-202ENST00000393104 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
PDCD4-202ENST00000393104 TNS3Q68CZ2 1445 aa13.76□□□□□ -0.21
PDCD4-202ENST00000393104 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
PDCD4-202ENST00000393104 F13A1P00488 732 aa13.76□□□□□ -0.21
PDCD4-202ENST00000393104 SSH3Q8TE77 659 aa13.76□□□□□ -0.21
PDCD4-202ENST00000393104 GNAI2P04899 355 aa13.75□□□□□ -0.21
PDCD4-202ENST00000393104 UBE2HP62256 183 aa13.75□□□□□ -0.21
PDCD4-202ENST00000393104 AOX1Q06278 1338 aa13.75□□□□□ -0.21
PDCD4-202ENST00000393104 EPB41L2O43491 1005 aaKnown RBP13.75□□□□□ -0.21
PDCD4-202ENST00000393104 CCT4P50991 539 aaKnown RBP13.75□□□□□ -0.21
PDCD4-202ENST00000393104 NAA30Q147X3 362 aaPredicted RBP13.75□□□□□ -0.21
PDCD4-202ENST00000393104 ADCY9O60503 1353 aa13.75□□□□□ -0.21
PDCD4-202ENST00000393104 KDM3BQ7LBC6 1761 aa13.75□□□□□ -0.21
PDCD4-202ENST00000393104 NCBP1Q09161 790 aaKnown RBP13.75□□□□□ -0.21
PDCD4-202ENST00000393104 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
PDCD4-202ENST00000393104 DNM1Q05193 864 aaKnown RBP13.74□□□□□ -0.21
PDCD4-202ENST00000393104 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
PDCD4-202ENST00000393104 STX6O43752 255 aa13.74□□□□□ -0.21
PDCD4-202ENST00000393104 MAP4K4O95819 1239 aaPredicted RBP13.74□□□□□ -0.21
PDCD4-202ENST00000393104 U2AF2P26368 475 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■■□□ 14.6
PDCD4-202ENST00000393104 HSPA2P54652 639 aa13.74□□□□□ -0.21
PDCD4-202ENST00000393104 PTH1RQ03431 593 aa13.74□□□□□ -0.21
PDCD4-202ENST00000393104 TAF6LQ9Y6J9 622 aa13.74□□□□□ -0.21
PDCD4-202ENST00000393104 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
PDCD4-202ENST00000393104 KCNH5Q8NCM2 988 aa13.74□□□□□ -0.21
PDCD4-202ENST00000393104 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
PDCD4-202ENST00000393104 NUTM1Q86Y26 1132 aa13.73□□□□□ -0.21
PDCD4-202ENST00000393104 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
PDCD4-202ENST00000393104 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
PDCD4-202ENST00000393104 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
PDCD4-202ENST00000393104 FLIIQ13045 1269 aa13.73□□□□□ -0.21
PDCD4-202ENST00000393104 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
PDCD4-202ENST00000393104 RILPL2Q969X0 211 aa13.73□□□□□ -0.21
PDCD4-202ENST00000393104 FAM53CQ9NYF3 392 aa13.73□□□□□ -0.21
PDCD4-202ENST00000393104 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
PDCD4-202ENST00000393104 IGSF1Q8N6C5 1336 aa13.72□□□□□ -0.21
PDCD4-202ENST00000393104 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
PDCD4-202ENST00000393104 LRMPQ12912 555 aa13.72□□□□□ -0.21
PDCD4-202ENST00000393104 TTC6Q86TZ1 520 aa13.72□□□□□ -0.21
PDCD4-202ENST00000393104 ATF3P18847 181 aa13.71□□□□□ -0.21
PDCD4-202ENST00000393104 LIG1P18858 919 aa13.71□□□□□ -0.21
PDCD4-202ENST00000393104 PSME1Q06323 249 aa13.71□□□□□ -0.21
PDCD4-202ENST00000393104 RGPD2P0DJD1 1756 aa13.71□□□□□ -0.22
PDCD4-202ENST00000393104 HMMRO75330 724 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 ME3Q16798 604 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 RGPD5Q99666 1765 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 CPDO75976 1380 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 ESCO1Q5FWF5 840 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 PTGS1P23219 599 aa13.7□□□□□ -0.22
PDCD4-202ENST00000393104 FAM173BQ6P4H8 233 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 SYAP1Q96A49 352 aaPredicted RBP13.69□□□□□ -0.22
PDCD4-202ENST00000393104 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 PARP4Q9UKK3 1724 aaKnown RBP13.69□□□□□ -0.22
PDCD4-202ENST00000393104 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 CCDC144CPQ8IYA2 1237 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
PDCD4-202ENST00000393104 ZSWIM6Q9HCJ5 1215 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 LIMCH1Q9UPQ0 1083 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 OVOS2A0A0G2JMS6 1433 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 TRIM6-TRIM34B2RNG4 842 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 FIBPO43427 364 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
PDCD4-202ENST00000393104 GTPBP4Q9BZE4 634 aaKnown RBP13.69□□□□□ -0.22
PDCD4-202ENST00000393104 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
PDCD4-202ENST00000393104 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
PDCD4-202ENST00000393104 IGSF3O75054 1194 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
PDCD4-202ENST00000393104 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 PHF14O94880 888 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 LUZP1Q86V48 1076 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 ORAI2Q96SN7 254 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 COL15A1P39059 1388 aa13.68□□□□□ -0.22
PDCD4-202ENST00000393104 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms