RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
GGPS1-203ENST00000391855 MBIPQ9NS73 344 aa16.47■□□□□ 0.23
GGPS1-203ENST00000391855 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
GGPS1-203ENST00000391855 DPEP1P16444 411 aa16.46■□□□□ 0.23
GGPS1-203ENST00000391855 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
GGPS1-203ENST00000391855 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
GGPS1-203ENST00000391855 MAP3K15Q6ZN16 1313 aa16.46■□□□□ 0.23
GGPS1-203ENST00000391855 A0A0G2JLW4 131 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 MYL6BP14649 208 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 NPHP1O15259 732 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 ST5P78524 1137 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 PRR5LQ6MZQ0 368 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 PIM2Q9P1W9 311 aa16.45■□□□□ 0.22
GGPS1-203ENST00000391855 IL16Q14005 1332 aa16.44■□□□□ 0.22
GGPS1-203ENST00000391855 PDIA6Q15084 440 aa16.44■□□□□ 0.22
GGPS1-203ENST00000391855 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
GGPS1-203ENST00000391855 BRIP1Q9BX63 1249 aa16.44■□□□□ 0.22
GGPS1-203ENST00000391855 DDX21Q9NR30 783 aaKnown RBP eCLIP16.44■□□□□ 0.22
GGPS1-203ENST00000391855 NIP7Q9Y221 180 aaKnown RBP eCLIP16.44■□□□□ 0.22
GGPS1-203ENST00000391855 DLEC1Q9Y238 1755 aa16.43■□□□□ 0.22
GGPS1-203ENST00000391855 PDE6BP35913 854 aa16.43■□□□□ 0.22
GGPS1-203ENST00000391855 DUSP27Q5VZP5 1158 aa16.43■□□□□ 0.22
GGPS1-203ENST00000391855 LRP10Q7Z4F1 713 aa16.43■□□□□ 0.22
GGPS1-203ENST00000391855 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
GGPS1-203ENST00000391855 IBTKQ9P2D0 1353 aaPredicted RBP16.43■□□□□ 0.22
GGPS1-203ENST00000391855 BCS1LQ9Y276 419 aa16.43■□□□□ 0.22
GGPS1-203ENST00000391855 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
GGPS1-203ENST00000391855 KCNA3P22001 575 aa16.42■□□□□ 0.22
GGPS1-203ENST00000391855 KRT24Q2M2I5 525 aa16.42■□□□□ 0.22
GGPS1-203ENST00000391855 DALRD3Q5D0E6 543 aaKnown RBP16.42■□□□□ 0.22
GGPS1-203ENST00000391855 TTLL7Q6ZT98 887 aa16.42■□□□□ 0.22
GGPS1-203ENST00000391855 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
GGPS1-203ENST00000391855 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
GGPS1-203ENST00000391855 NUP98P52948 1817 aa16.41■□□□□ 0.22
GGPS1-203ENST00000391855 H0YIN7 160 aa16.41■□□□□ 0.22
GGPS1-203ENST00000391855 CHRNA5P30532 468 aa16.41■□□□□ 0.22
GGPS1-203ENST00000391855 HLFQ16534 295 aa16.41■□□□□ 0.22
GGPS1-203ENST00000391855 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
GGPS1-203ENST00000391855 GIGYF2Q6Y7W6 1299 aaKnown RBP16.41■□□□□ 0.22
GGPS1-203ENST00000391855 NYXQ9GZU5 481 aa16.41■□□□□ 0.22
GGPS1-203ENST00000391855 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 C2CD5Q86YS7 1000 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 WDR63Q8IWG1 891 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
GGPS1-203ENST00000391855 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
GGPS1-203ENST00000391855 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
GGPS1-203ENST00000391855 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
GGPS1-203ENST00000391855 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
GGPS1-203ENST00000391855 ANXA1P04083 346 aa16.38■□□□□ 0.21
GGPS1-203ENST00000391855 PARP10Q53GL7 1025 aa16.38■□□□□ 0.21
GGPS1-203ENST00000391855 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
GGPS1-203ENST00000391855 XAGE3Q8WTP9 111 aa16.38■□□□□ 0.21
GGPS1-203ENST00000391855 ANKRD36CQ5JPF3 1778 aa16.38■□□□□ 0.21
GGPS1-203ENST00000391855 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
GGPS1-203ENST00000391855 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
GGPS1-203ENST00000391855 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
GGPS1-203ENST00000391855 COL11A2P13942 1736 aaPredicted RBP16.37■□□□□ 0.21
GGPS1-203ENST00000391855 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
GGPS1-203ENST00000391855 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
GGPS1-203ENST00000391855 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
GGPS1-203ENST00000391855 STYK1Q6J9G0 422 aa16.36■□□□□ 0.21
GGPS1-203ENST00000391855 PPP1R42Q7Z4L9 355 aa16.36■□□□□ 0.21
GGPS1-203ENST00000391855 C8orf58Q8NAV2 365 aa16.36■□□□□ 0.21
GGPS1-203ENST00000391855 CNKSR1Q969H4 720 aa16.36■□□□□ 0.21
GGPS1-203ENST00000391855 UBN2Q6ZU65 1347 aa16.35■□□□□ 0.21
GGPS1-203ENST00000391855 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
GGPS1-203ENST00000391855 GPTP24298 496 aa16.35■□□□□ 0.21
GGPS1-203ENST00000391855 AIMP1Q12904 312 aaKnown RBP16.35■□□□□ 0.21
GGPS1-203ENST00000391855 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
GGPS1-203ENST00000391855 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
GGPS1-203ENST00000391855 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
GGPS1-203ENST00000391855 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
GGPS1-203ENST00000391855 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
GGPS1-203ENST00000391855 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
GGPS1-203ENST00000391855 SRGNP10124 158 aa16.34■□□□□ 0.21
GGPS1-203ENST00000391855 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
GGPS1-203ENST00000391855 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
GGPS1-203ENST00000391855 ARFGEF2Q9Y6D5 1785 aa16.34■□□□□ 0.21
GGPS1-203ENST00000391855 ADCY9O60503 1353 aa16.34■□□□□ 0.21
GGPS1-203ENST00000391855 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
GGPS1-203ENST00000391855 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
GGPS1-203ENST00000391855 NPR1P16066 1061 aa16.33■□□□□ 0.2
GGPS1-203ENST00000391855 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
GGPS1-203ENST00000391855 TCIRG1Q13488 830 aa16.33■□□□□ 0.2
GGPS1-203ENST00000391855 TWISTNBQ3B726 338 aaPredicted RBP16.33■□□□□ 0.2
GGPS1-203ENST00000391855 ANKRD13DQ6ZTN6 518 aa16.33■□□□□ 0.2
GGPS1-203ENST00000391855 MYH16Q9H6N6 1097 aa16.33■□□□□ 0.2
GGPS1-203ENST00000391855 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
GGPS1-203ENST00000391855 NTSR2O95665 410 aa16.32■□□□□ 0.2
GGPS1-203ENST00000391855 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
GGPS1-203ENST00000391855 SUSD4Q5VX71 490 aa16.32■□□□□ 0.2
GGPS1-203ENST00000391855 ZNF784Q8NCA9 323 aaPredicted RBP16.32■□□□□ 0.2
GGPS1-203ENST00000391855 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms