RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SPOCK3Q9BQ16 436 aa8.66□□□□□ -1.02
TRAV35-201ENST00000390462 EVA1BQ9NVM1 165 aa8.66□□□□□ -1.02
TRAV35-201ENST00000390462 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
TRAV35-201ENST00000390462 CUX2O14529 1486 aa8.65□□□□□ -1.02
TRAV35-201ENST00000390462 ATAD2Q6PL18 1390 aa8.65□□□□□ -1.02
TRAV35-201ENST00000390462 PDGFRBP09619 1106 aa8.65□□□□□ -1.02
TRAV35-201ENST00000390462 CCNYL3P0C7X3 344 aa8.65□□□□□ -1.02
TRAV35-201ENST00000390462 EIF4BP23588 611 aaKnown RBP8.65□□□□□ -1.02
TRAV35-201ENST00000390462 BCAMP50895 628 aa8.65□□□□□ -1.02
TRAV35-201ENST00000390462 HSP90AB4PQ58FF6 505 aa8.65□□□□□ -1.02
TRAV35-201ENST00000390462 APBB1IPQ7Z5R6 666 aaPredicted RBP8.65□□□□□ -1.02
TRAV35-201ENST00000390462 STAC3Q96MF2 364 aa8.65□□□□□ -1.02
TRAV35-201ENST00000390462 TSR3Q9UJK0 312 aaKnown RBP8.65□□□□□ -1.02
TRAV35-201ENST00000390462 CREB3O43889 395 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 TBX4P57082 545 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 SH3BP5LQ7L8J4 393 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 JDP2Q8WYK2 163 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 THAP11Q96EK4 314 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 CCDC136Q96JN2 1154 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 UBA5Q9GZZ9 404 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 TYW1Q9NV66 732 aaKnown RBP8.64□□□□□ -1.03
TRAV35-201ENST00000390462 PRR12Q9ULL5 1215 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 SPG7Q9UQ90 795 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 PCDHB3Q9Y5E6 796 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 PCDHB11Q9Y5F2 797 aa8.64□□□□□ -1.03
TRAV35-201ENST00000390462 USP31Q70CQ4 1352 aa8.63□□□□□ -1.03
TRAV35-201ENST00000390462 TNFRSF10BO14763 440 aa8.63□□□□□ -1.03
TRAV35-201ENST00000390462 NR1I2O75469 434 aa8.63□□□□□ -1.03
TRAV35-201ENST00000390462 SSBP05455 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAV35-201ENST00000390462 RALBP1Q15311 655 aa8.63□□□□□ -1.03
TRAV35-201ENST00000390462 NBPF20Q3BBV1 942 aa8.63□□□□□ -1.03
TRAV35-201ENST00000390462 GJD3Q8N144 294 aa8.63□□□□□ -1.03
TRAV35-201ENST00000390462 CSRNP1Q96S65 589 aa8.63□□□□□ -1.03
TRAV35-201ENST00000390462 GEMIN8Q9NWZ8 242 aaKnown RBP8.63□□□□□ -1.03
TRAV35-201ENST00000390462 COX20Q5RI15 118 aa8.62□□□□□ -1.03
TRAV35-201ENST00000390462 ABTB2Q8N961 1025 aa8.62□□□□□ -1.03
TRAV35-201ENST00000390462 RASGRP4Q8TDF6 673 aa8.62□□□□□ -1.03
TRAV35-201ENST00000390462 CHMP7Q8WUX9 453 aaPredicted RBP8.62□□□□□ -1.03
TRAV35-201ENST00000390462 WNT2BQ93097 391 aa8.62□□□□□ -1.03
TRAV35-201ENST00000390462 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
TRAV35-201ENST00000390462 ZNF408Q9H9D4 720 aa8.62□□□□□ -1.03
TRAV35-201ENST00000390462 V9GY48 417 aaPredicted RBP8.62□□□□□ -1.03
TRAV35-201ENST00000390462 SCRIBQ14160 1630 aa8.62□□□□□ -1.03
TRAV35-201ENST00000390462 HMGB1P1B2RPK0 211 aaPredicted RBP8.61□□□□□ -1.03
TRAV35-201ENST00000390462 CDC45O75419 566 aa8.61□□□□□ -1.03
TRAV35-201ENST00000390462 RHBDL3P58872 404 aa8.61□□□□□ -1.03
TRAV35-201ENST00000390462 CHMP4BP1P59074 171 aa8.61□□□□□ -1.03
TRAV35-201ENST00000390462 NFX1Q12986 1120 aaKnown RBP8.61□□□□□ -1.03
TRAV35-201ENST00000390462 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
TRAV35-201ENST00000390462 ANKRD13DQ6ZTN6 518 aa8.61□□□□□ -1.03
TRAV35-201ENST00000390462 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
TRAV35-201ENST00000390462 PRC1O43663 620 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
TRAV35-201ENST00000390462 USP5P45974 858 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 TEX2Q8IWB9 1127 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 TNS4Q8IZW8 715 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 CARD14Q9BXL6 1004 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 FANCLQ9NW38 375 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 SNTG2Q9NY99 539 aa8.6□□□□□ -1.03
TRAV35-201ENST00000390462 TMEM229AB2RXF0 380 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 ZBTB39O15060 712 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 MYCP01106 439 aaPredicted RBP8.59□□□□□ -1.03
TRAV35-201ENST00000390462 BIRC2Q13490 618 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 MSS51Q4VC12 460 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 SPTY2D1Q68D10 685 aaPredicted RBP8.59□□□□□ -1.03
TRAV35-201ENST00000390462 ANKS3Q6ZW76 656 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 ATCAYQ86WG3 371 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 PRPF38AQ8NAV1 312 aaKnown RBP8.59□□□□□ -1.03
TRAV35-201ENST00000390462 DEPDC7Q96QD5 511 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 NUDT12Q9BQG2 462 aa8.59□□□□□ -1.03
TRAV35-201ENST00000390462 MAGEB6P1A0A0J9YX57 407 aa8.58□□□□□ -1.04
TRAV35-201ENST00000390462 TAF1CQ15572 869 aaPredicted RBP8.58□□□□□ -1.04
TRAV35-201ENST00000390462 ARSHQ5FYA8 562 aa8.58□□□□□ -1.04
TRAV35-201ENST00000390462 ODR4Q5SWX8 454 aa8.58□□□□□ -1.04
TRAV35-201ENST00000390462 APPBP2Q92624 585 aa8.58□□□□□ -1.04
TRAV35-201ENST00000390462 EVI5LQ96CN4 794 aa8.58□□□□□ -1.04
TRAV35-201ENST00000390462 TSPAN10Q9H1Z9 355 aaPredicted RBP8.58□□□□□ -1.04
TRAV35-201ENST00000390462 C12orf49Q9H741 205 aa8.58□□□□□ -1.04
TRAV35-201ENST00000390462 A0A1W2PRU2 124 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 EIF1AYO14602 144 aaKnown RBP8.57□□□□□ -1.04
TRAV35-201ENST00000390462 BACH1O14867 736 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 KLF4O43474 513 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 ETFBP38117 255 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 RAB33AQ14088 237 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 RASA3Q14644 834 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 ERMP1Q7Z2K6 904 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 RPS6KC1Q96S38 1066 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 WBP1LQ9NX94 342 aa8.57□□□□□ -1.04
TRAV35-201ENST00000390462 FAM221BA6H8Z2 402 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 OPLAHO14841 1288 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
TRAV35-201ENST00000390462 PPFIA4O75335 1185 aa8.56□□□□□ -1.04
TRAV35-201ENST00000390462 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
TRAV35-201ENST00000390462 GYS2P54840 703 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms