RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 LMNB1P20700 586 aa17.88■□□□□ 0.45
TRBV4-1-201ENST00000390357 STYK1Q6J9G0 422 aa17.88■□□□□ 0.45
TRBV4-1-201ENST00000390357 NBPF5PQ86XG9 351 aaPredicted RBP17.88■□□□□ 0.45
TRBV4-1-201ENST00000390357 MASTLQ96GX5 879 aa17.88■□□□□ 0.45
TRBV4-1-201ENST00000390357 ERBB4Q15303 1308 aa17.88■□□□□ 0.45
TRBV4-1-201ENST00000390357 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
TRBV4-1-201ENST00000390357 SOGA3Q5TF21 947 aa17.87■□□□□ 0.45
TRBV4-1-201ENST00000390357 LAMB4A4D0S4 1761 aa17.86■□□□□ 0.45
TRBV4-1-201ENST00000390357 SRGNP10124 158 aa17.86■□□□□ 0.45
TRBV4-1-201ENST00000390357 HSPA6P17066 643 aa17.86■□□□□ 0.45
TRBV4-1-201ENST00000390357 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
TRBV4-1-201ENST00000390357 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRBV4-1-201ENST00000390357 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
TRBV4-1-201ENST00000390357 WDR43Q15061 677 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRBV4-1-201ENST00000390357 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
TRBV4-1-201ENST00000390357 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
TRBV4-1-201ENST00000390357 NYXQ9GZU5 481 aa17.85■□□□□ 0.45
TRBV4-1-201ENST00000390357 TSPYL4Q9UJ04 414 aa17.85■□□□□ 0.45
TRBV4-1-201ENST00000390357 KLRG2A4D1S0 409 aaPredicted RBP17.84■□□□□ 0.45
TRBV4-1-201ENST00000390357 KIF6Q6ZMV9 814 aa17.84■□□□□ 0.45
TRBV4-1-201ENST00000390357 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
TRBV4-1-201ENST00000390357 ALDH1B1P30837 517 aa17.83■□□□□ 0.44
TRBV4-1-201ENST00000390357 DPY19L2Q6NUT2 758 aa17.83■□□□□ 0.44
TRBV4-1-201ENST00000390357 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
TRBV4-1-201ENST00000390357 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.44
TRBV4-1-201ENST00000390357 CCDC88AQ3V6T2 1871 aa17.83■□□□□ 0.44
TRBV4-1-201ENST00000390357 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
TRBV4-1-201ENST00000390357 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
TRBV4-1-201ENST00000390357 C21orf2O43822 256 aa17.82■□□□□ 0.44
TRBV4-1-201ENST00000390357 NPR1P16066 1061 aa17.82■□□□□ 0.44
TRBV4-1-201ENST00000390357 RBM46Q8TBY0 533 aaKnown RBP17.82■□□□□ 0.44
TRBV4-1-201ENST00000390357 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
TRBV4-1-201ENST00000390357 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
TRBV4-1-201ENST00000390357 HLFQ16534 295 aa17.81■□□□□ 0.44
TRBV4-1-201ENST00000390357 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
TRBV4-1-201ENST00000390357 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
TRBV4-1-201ENST00000390357 NMRK2Q9NPI5 230 aa17.81■□□□□ 0.44
TRBV4-1-201ENST00000390357 NUP98P52948 1817 aa17.81■□□□□ 0.44
TRBV4-1-201ENST00000390357 FSTL1Q12841 308 aa17.8■□□□□ 0.44
TRBV4-1-201ENST00000390357 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
TRBV4-1-201ENST00000390357 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
TRBV4-1-201ENST00000390357 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 NFKBIEO00221 500 aa17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 MYL6BP14649 208 aa17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 APLP1P51693 650 aa17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 RASSF7Q02833 373 aa17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 GIGYF2Q6Y7W6 1299 aaKnown RBP17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 RRAGCQ9HB90 399 aa17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
TRBV4-1-201ENST00000390357 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
TRBV4-1-201ENST00000390357 CHL1O00533 1208 aa17.78■□□□□ 0.44
TRBV4-1-201ENST00000390357 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
TRBV4-1-201ENST00000390357 PPP1R42Q7Z4L9 355 aa17.78■□□□□ 0.44
TRBV4-1-201ENST00000390357 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
TRBV4-1-201ENST00000390357 EIF2S2P20042 333 aaKnown RBP17.77■□□□□ 0.44
TRBV4-1-201ENST00000390357 NEUROD2Q15784 382 aa17.77■□□□□ 0.44
TRBV4-1-201ENST00000390357 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
TRBV4-1-201ENST00000390357 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.44
TRBV4-1-201ENST00000390357 PARP10Q53GL7 1025 aa17.77■□□□□ 0.44
TRBV4-1-201ENST00000390357 RTKN2Q8IZC4 609 aa17.77■□□□□ 0.44
TRBV4-1-201ENST00000390357 IBTKQ9P2D0 1353 aaPredicted RBP17.77■□□□□ 0.43
TRBV4-1-201ENST00000390357 SLX4Q8IY92 1834 aa17.77■□□□□ 0.43
TRBV4-1-201ENST00000390357 COL11A2P13942 1736 aaPredicted RBP17.76■□□□□ 0.43
TRBV4-1-201ENST00000390357 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
TRBV4-1-201ENST00000390357 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
TRBV4-1-201ENST00000390357 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
TRBV4-1-201ENST00000390357 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
TRBV4-1-201ENST00000390357 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
TRBV4-1-201ENST00000390357 FAM177BA6PVY3 158 aa17.75■□□□□ 0.43
TRBV4-1-201ENST00000390357 HOXB7P09629 217 aa17.75■□□□□ 0.43
TRBV4-1-201ENST00000390357 PRELPP51888 382 aa17.75■□□□□ 0.43
TRBV4-1-201ENST00000390357 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
TRBV4-1-201ENST00000390357 CC2D2BQ6DHV5 1058 aa17.75■□□□□ 0.43
TRBV4-1-201ENST00000390357 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
TRBV4-1-201ENST00000390357 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
TRBV4-1-201ENST00000390357 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 PDIA6Q15084 440 aa17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 CRY2Q49AN0 593 aa17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 CHMP4AQ9BY43 222 aa17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 ZBTB3Q9H5J0 574 aa17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRBV4-1-201ENST00000390357 LRP10Q7Z4F1 713 aa17.73■□□□□ 0.43
TRBV4-1-201ENST00000390357 SMC1BQ8NDV3 1235 aa17.73■□□□□ 0.43
TRBV4-1-201ENST00000390357 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 SUSD4Q5VX71 490 aa17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 NLRP3Q96P20 1036 aa17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
TRBV4-1-201ENST00000390357 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
TRBV4-1-201ENST00000390357 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
TRBV4-1-201ENST00000390357 RBM17Q96I25 401 aaKnown RBP17.71■□□□□ 0.43
TRBV4-1-201ENST00000390357 CRAMP1Q96RY5 1269 aa17.71■□□□□ 0.43
TRBV4-1-201ENST00000390357 TIAM2Q8IVF5 1701 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms