RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 N4BP2Q86UW6 1770 aaPredicted RBP8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 CLTCQ00610 1675 aaKnown RBP8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 MBD3O95983 291 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 SLFN14P0C7P3 912 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 CBX1P83916 185 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 PKP1Q13835 747 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 TMEM164Q5U3C3 297 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 CHADLQ6NUI6 762 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 PIK3R5Q8WYR1 880 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 OGFRQ9NZT2 677 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 GABBR1Q9UBS5 961 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 NSFL1CQ9UNZ2 370 aaKnown RBP8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 FAN1Q9Y2M0 1017 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 TBX22Q9Y458 520 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 FANCAO15360 1455 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 PPP2R2DQ66LE6 453 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 PLEKHF1Q96S99 279 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 NSD2O96028 1365 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 PREX1Q8TCU6 1659 aa8.07□□□□□ -1.12
CDKAL1-202ENST00000378610 FRMPD1Q5SYB0 1578 aa8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 FAM184AQ8NB25 1140 aa8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 TMEM87AQ8NBN3 555 aa8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 ZNF830Q96NB3 372 aaPredicted RBP8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 MORC2Q9Y6X9 1032 aaPredicted RBP8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 CHMP7Q8WUX9 453 aaPredicted RBP8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 ZMIZ1Q9ULJ6 1067 aa8.06□□□□□ -1.12
CDKAL1-202ENST00000378610 SETD1AO15047 1707 aaKnown RBP8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 HDLBPQ00341 1268 aaKnown RBP8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 ALDH1L2Q3SY69 923 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 POTEDQ86YR6 584 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 USP26Q9BXU7 913 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 ADGRB3O60242 1522 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 ASXL2Q76L83 1435 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 ATAD2Q6PL18 1390 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 TCHHQ07283 1943 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 KIAA1524Q8TCG1 905 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 CTNNA3Q9UI47 895 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 KIF20BQ96Q89 1820 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 SYCE3A1L190 88 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 CREB3O43889 395 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 IRX5P78411 483 aaPredicted RBP8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 VAC14Q08AM6 782 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 PTGDRQ13258 359 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 PDCL2Q8N4E4 241 aa8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
CDKAL1-202ENST00000378610 CRYBG1Q9Y4K1 1723 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 NSD3Q9BZ95 1437 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 PRR29P0C7W0 189 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 GSPT1P15170 499 aaKnown RBP8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 TCEAL1Q15170 157 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 TMEM57Q8N5G2 664 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 SSH1Q8WYL5 1049 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 FUCA2Q9BTY2 467 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 CUEDC1Q9NWM3 386 aaPredicted RBP8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 IQSEC3Q9UPP2 1182 aaPredicted RBP8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 CDC45O75419 566 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 CUL4AQ13619 759 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 FAM43BQ6ZT52 329 aaPredicted RBP8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 CREBRFQ8IUR6 639 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 NLRP7Q8WX94 980 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 TSPY26PQ9H489 355 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 PRM3Q9NNZ6 103 aa8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 MAGEC2Q9UBF1 373 aaPredicted RBP8.04□□□□□ -1.12
CDKAL1-202ENST00000378610 U2SURPO15042 1029 aaKnown RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 ZBTB7BO15156 539 aaPredicted RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 RAD51AP2Q09MP3 1159 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 RGL3Q3MIN7 710 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 TSC1Q92574 1164 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 BIN2Q9UBW5 565 aaPredicted RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 TRIM35Q9UPQ4 493 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 RTL1A6NKG5 1358 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 RPAP1Q9BWH6 1393 aaPredicted RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 DLG5Q8TDM6 1919 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 GPR37L1O60883 481 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 PRPF40AO75400 957 aaKnown RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 C1QBPQ07021 282 aaKnown RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 NCBP1Q09161 790 aaKnown RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 SIRT2Q8IXJ6 389 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 FTSJ3Q8IY81 847 aaKnown RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 ARHGAP45Q92619 1136 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 KCNF1Q9H3M0 494 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 CHD2O14647 1828 aaKnown RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 CHMP4BQ9H444 224 aaKnown RBP8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 ALG2Q9H553 416 aa8.03□□□□□ -1.12
CDKAL1-202ENST00000378610 TULP4Q9NRJ4 1543 aa8.02□□□□□ -1.13
CDKAL1-202ENST00000378610 PAX3P23760 479 aa8.02□□□□□ -1.13
CDKAL1-202ENST00000378610 ARID4AP29374 1257 aaPredicted RBP8.02□□□□□ -1.13
CDKAL1-202ENST00000378610 SCNN1AP37088 669 aa8.02□□□□□ -1.13
CDKAL1-202ENST00000378610 HNRNPMP52272 730 aaKnown RBP eCLIP8.02□□□□□ -1.132e-7■■■■■ 29.2
CDKAL1-202ENST00000378610 PRKAG2Q9UGJ0 569 aa8.02□□□□□ -1.13
CDKAL1-202ENST00000378610 ABCC4O15439 1325 aa8.02□□□□□ -1.13
CDKAL1-202ENST00000378610 U2AF2P26368 475 aaKnown RBP eCLIP8.02□□□□□ -1.132e-6■■■□□ 17.9
CDKAL1-202ENST00000378610 USP25Q9UHP3 1055 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms