RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FSIP1Q8NA03 581 aa7.68□□□□□ -1.18
SMC1A-202ENST00000375340 NOL10Q9BSC4 688 aaKnown RBP7.68□□□□□ -1.18
SMC1A-202ENST00000375340 F13A1P00488 732 aa7.68□□□□□ -1.18
SMC1A-202ENST00000375340 TMC6Q7Z403 805 aa7.68□□□□□ -1.18
SMC1A-202ENST00000375340 RHPN1Q8TCX5 695 aa7.68□□□□□ -1.18
SMC1A-202ENST00000375340 INSRP06213 1382 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 CCDC57Q2TAC2 916 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 NCBP3Q53F19 620 aaKnown RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 DYNC1I1O14576 645 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 IPO7O95373 1038 aaKnown RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 PTPN14Q15678 1187 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 AMOTL1Q8IY63 956 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 DCTPP1Q9H773 170 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 AMOTL2Q9Y2J4 779 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 TET3O43151 1660 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 ATP5J2-PTCD1G3V325 749 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 PTCD1O75127 700 aaKnown RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 HAND2P61296 217 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 PKP1Q13835 747 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 KRT32Q14532 448 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 NOLC1Q14978 699 aaKnown RBP eCLIP7.67□□□□□ -1.185e-7■□□□□ 9.5
SMC1A-202ENST00000375340 STX1AQ16623 288 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 GOLIM4O00461 696 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 SART3Q15020 963 aaKnown RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 IMMTQ16891 758 aaKnown RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 TSPOAP1O95153 1857 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 ABCA6Q8N139 1617 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 GSPT1P15170 499 aaKnown RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 CEP135Q66GS9 1140 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 AK7Q96M32 723 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 GOLGA8BA8MQT2 603 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 POLR3DP05423 398 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 PPFIBP1Q86W92 1011 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 RUFY1Q96T51 708 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 NPC1L1Q9UHC9 1359 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 CBFA2T2O43439 604 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 CD2BP2O95400 341 aaKnown RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 CASQ1P31415 396 aa7.67□□□□□ -1.18
SMC1A-202ENST00000375340 PROSER2Q86WR7 435 aaPredicted RBP7.67□□□□□ -1.18
SMC1A-202ENST00000375340 CFAP100Q494V2 611 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 IDH1O75874 414 aaKnown RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 HSP90AB3PQ58FF7 597 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 TOM1L2Q6ZVM7 507 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 TRERF1Q96PN7 1200 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 ECHDC1Q9NTX5 307 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 V9GYY5 206 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 CHMLP26374 656 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 ATP8B2P98198 1209 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 HSP90B2PQ58FF3 399 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 SAMD1Q6SPF0 538 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 CCDC66A2RUB6 948 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 PHAXQ9H814 394 aaKnown RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 POLR3GO15318 223 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 XBP1P17861 261 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 SCAND2PQ9GZW5 306 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 DNAJC25Q9H1X3 360 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 CGNQ9P2M7 1197 aaKnown RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 RBM8AQ9Y5S9 174 aaKnown RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 MAP3K4Q9Y6R4 1608 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 PTGS1P23219 599 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 TRMT2AQ8IZ69 625 aaKnown RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 SMARCE1Q969G3 411 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 MAGEC2Q9UBF1 373 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-202ENST00000375340 ZKSCAN5Q9Y2L8 839 aa7.66□□□□□ -1.18
SMC1A-202ENST00000375340 MCM5P33992 734 aa7.65□□□□□ -1.18
SMC1A-202ENST00000375340 IL13P35225 146 aa7.65□□□□□ -1.18
SMC1A-202ENST00000375340 Q6ZUG5 572 aa7.65□□□□□ -1.18
SMC1A-202ENST00000375340 CCDC47Q96A33 483 aaKnown RBP7.65□□□□□ -1.18
SMC1A-202ENST00000375340 OFD1O75665 1012 aa7.65□□□□□ -1.18
SMC1A-202ENST00000375340 TDO2P48775 406 aa7.65□□□□□ -1.18
SMC1A-202ENST00000375340 HSP90AA4PQ58FG1 418 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 CCDC82Q8N4S0 544 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 ANO10Q9NW15 660 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 UVSSAQ2YD98 709 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 FILIP1LQ4L180 1135 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 DDX46Q7L014 1031 aaKnown RBP7.65□□□□□ -1.19
SMC1A-202ENST00000375340 CHST3Q7LGC8 479 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 KLHL10Q6JEL2 608 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 C8orf76Q96K31 380 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 SNRKQ9NRH2 765 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 LMBRD1Q9NUN5 540 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 HYPKQ9NX55 129 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 ZNF521Q96K83 1311 aa7.65□□□□□ -1.19
SMC1A-202ENST00000375340 IFIT1P09914 478 aaKnown RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 CFAP74Q9C0B2 1584 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 SMTNL1A8MU46 457 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 JMYQ8N9B5 988 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 PLEKHF1Q96S99 279 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 U3KPZ7 1027 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 ACBD3Q9H3P7 528 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 CWC15Q9P013 229 aaKnown RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 EPS15P42566 896 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 SLC4A8Q2Y0W8 1093 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 NOM1Q5C9Z4 860 aaKnown RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 LUZP1Q86V48 1076 aa7.64□□□□□ -1.19
SMC1A-202ENST00000375340 DHX37Q8IY37 1157 aaKnown RBP7.64□□□□□ -1.19
SMC1A-202ENST00000375340 THEMISQ8N1K5 641 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms