RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 TTC41PQ6P2S7 1318 aa13.47□□□□□ -0.25
PTCH2-201ENST00000372192 GLI2P10070 1586 aa13.47□□□□□ -0.25
PTCH2-201ENST00000372192 TYRO3Q06418 890 aa13.47□□□□□ -0.25
PTCH2-201ENST00000372192 DHX8Q14562 1220 aaKnown RBP13.47□□□□□ -0.25
PTCH2-201ENST00000372192 STK38Q15208 465 aa13.47□□□□□ -0.25
PTCH2-201ENST00000372192 CCDC8Q9H0W5 538 aaPredicted RBP13.47□□□□□ -0.25
PTCH2-201ENST00000372192 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
PTCH2-201ENST00000372192 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
PTCH2-201ENST00000372192 NSFL1CQ9UNZ2 370 aaKnown RBP13.47□□□□□ -0.25
PTCH2-201ENST00000372192 NEMFO60524 1076 aa13.46□□□□□ -0.25
PTCH2-201ENST00000372192 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.25
PTCH2-201ENST00000372192 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.25
PTCH2-201ENST00000372192 CTAGE5O15320 804 aa13.46□□□□□ -0.25
PTCH2-201ENST00000372192 PAXBP1Q9Y5B6 917 aa13.46□□□□□ -0.25
PTCH2-201ENST00000372192 RGS12O14924 1447 aa13.46□□□□□ -0.26
PTCH2-201ENST00000372192 FLT4P35916 1363 aa13.46□□□□□ -0.26
PTCH2-201ENST00000372192 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.26
PTCH2-201ENST00000372192 C17orf53Q8N3J3 647 aaPredicted RBP13.46□□□□□ -0.26
PTCH2-201ENST00000372192 CHD1O14646 1710 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 KIF2AO00139 706 aaPredicted RBP13.45□□□□□ -0.26
PTCH2-201ENST00000372192 CPA1P15085 419 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 ANO10Q9NW15 660 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 ZNF330Q9Y3S2 320 aaPredicted RBP13.45□□□□□ -0.26
PTCH2-201ENST00000372192 ATP7BP35670 1465 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
PTCH2-201ENST00000372192 USHBP1Q8N6Y0 703 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
PTCH2-201ENST00000372192 CCP110O43303 1012 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 PTGS1P23219 599 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 KIF18AQ8NI77 898 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 EYA1Q99502 592 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 MAP3K19Q56UN5 1328 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 MLH3Q9UHC1 1453 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 TNNT3P45378 269 aaPredicted RBP13.44□□□□□ -0.26
PTCH2-201ENST00000372192 TRDNQ13061 729 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 RALYLQ86SE5 291 aaKnown RBP13.44□□□□□ -0.26
PTCH2-201ENST00000372192 CFAP74Q9C0B2 1584 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 HMG20BQ9P0W2 317 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 FAM177BA6PVY3 158 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
PTCH2-201ENST00000372192 TRIM29Q14134 588 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 STAP2Q9UGK3 403 aa13.44□□□□□ -0.26
PTCH2-201ENST00000372192 NRXN1Q9ULB1 1477 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 MYOM1P52179 1685 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 LRRC7Q96NW7 1537 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 GTPBP4Q9BZE4 634 aaKnown RBP13.43□□□□□ -0.26
PTCH2-201ENST00000372192 ANXA1P04083 346 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 RUFY3Q7L099 469 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 CHPF2Q9P2E5 772 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 CPSF1Q10570 1443 aaKnown RBP13.43□□□□□ -0.26
PTCH2-201ENST00000372192 GPS2Q13227 327 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
PTCH2-201ENST00000372192 HOOK1Q9UJC3 728 aaKnown RBP13.43□□□□□ -0.26
PTCH2-201ENST00000372192 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
PTCH2-201ENST00000372192 PHAXQ9H814 394 aaKnown RBP13.42□□□□□ -0.26
PTCH2-201ENST00000372192 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 STX1AQ16623 288 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 TAF3Q5VWG9 929 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
PTCH2-201ENST00000372192 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 CEP135Q66GS9 1140 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 CREB3L3Q68CJ9 461 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 OLFM4Q6UX06 510 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 ABCC3O15438 1527 aa13.42□□□□□ -0.26
PTCH2-201ENST00000372192 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 RIOK3O14730 519 aaKnown RBP13.41□□□□□ -0.26
PTCH2-201ENST00000372192 DNAJC25Q9H1X3 360 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 SSH3Q8TE77 659 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 TSC1Q92574 1164 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
PTCH2-201ENST00000372192 NEK1Q96PY6 1258 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
PTCH2-201ENST00000372192 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
PTCH2-201ENST00000372192 SFPQP23246 707 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTCH2-201ENST00000372192 UNC5CLQ8IV45 518 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 NEURL4Q96JN8 1562 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 SMTNL1A8MU46 457 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 HMGB1P09429 215 aaKnown RBP13.4□□□□□ -0.26
PTCH2-201ENST00000372192 MYL6BP14649 208 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
PTCH2-201ENST00000372192 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 GSDMDP57764 484 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 FEZ1Q99689 392 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 HYPKQ9NX55 129 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 MPRIPQ6WCQ1 1025 aa13.4□□□□□ -0.26
PTCH2-201ENST00000372192 MAP3K5Q99683 1374 aa13.4□□□□□ -0.27
PTCH2-201ENST00000372192 SERPINC1P01008 464 aa13.39□□□□□ -0.27
PTCH2-201ENST00000372192 NMIQ13287 307 aaPredicted RBP13.39□□□□□ -0.27
PTCH2-201ENST00000372192 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
PTCH2-201ENST00000372192 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
PTCH2-201ENST00000372192 A0A0U1RQG5 324 aaPredicted RBP13.39□□□□□ -0.27
PTCH2-201ENST00000372192 APPP05067 770 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms