RNA–Protein interactions for RNA: ENST00000372088.6

CCSER2-203, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2 BASIC

Gene CCSER2, Length 7,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-203ENST00000372088 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
CCSER2-203ENST00000372088 SSH3Q8TE77 659 aa16.53■□□□□ 0.24
CCSER2-203ENST00000372088 NEK1Q96PY6 1258 aa16.53■□□□□ 0.24
CCSER2-203ENST00000372088 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
CCSER2-203ENST00000372088 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
CCSER2-203ENST00000372088 TXLNAP40222 546 aa16.53■□□□□ 0.24
CCSER2-203ENST00000372088 MED14O60244 1454 aa16.53■□□□□ 0.24
CCSER2-203ENST00000372088 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
CCSER2-203ENST00000372088 AIDAQ96BJ3 306 aa16.52■□□□□ 0.24
CCSER2-203ENST00000372088 RNF41Q9H4P4 317 aaPredicted RBP16.52■□□□□ 0.24
CCSER2-203ENST00000372088 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.24
CCSER2-203ENST00000372088 CFAP74Q9C0B2 1584 aa16.52■□□□□ 0.24
CCSER2-203ENST00000372088 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
CCSER2-203ENST00000372088 STRN4Q9NRL3 753 aa16.52■□□□□ 0.24
CCSER2-203ENST00000372088 ABCC3O15438 1527 aa16.52■□□□□ 0.24
CCSER2-203ENST00000372088 FILIP1LQ4L180 1135 aa16.52■□□□□ 0.24
CCSER2-203ENST00000372088 RBM33Q96EV2 1170 aaKnown RBP16.52■□□□□ 0.24
CCSER2-203ENST00000372088 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.23
CCSER2-203ENST00000372088 STK3Q13188 491 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 PNPLA6Q8IY17 1366 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 UQCRFS1P1P0C7P4 283 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
CCSER2-203ENST00000372088 IGSF1Q8N6C5 1336 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 GJB2P29033 226 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 ZNF592Q92610 1267 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 G3V3G9 751 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 F13A1P00488 732 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 ZSCAN23Q3MJ62 389 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 DCAF8Q5TAQ9 597 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
CCSER2-203ENST00000372088 ATL3Q6DD88 541 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 FAM200AQ8TCP9 573 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 TET3O43151 1660 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 SGSM2O43147 1006 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 RNMTO43148 476 aaKnown RBP16.5■□□□□ 0.23
CCSER2-203ENST00000372088 UBAC1Q9BSL1 405 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 ACBD3Q9H3P7 528 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 PHAXQ9H814 394 aaKnown RBP16.5■□□□□ 0.23
CCSER2-203ENST00000372088 RBM8AQ9Y5S9 174 aaKnown RBP16.5■□□□□ 0.23
CCSER2-203ENST00000372088 CCDC69A6NI79 296 aa16.5■□□□□ 0.23
CCSER2-203ENST00000372088 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
CCSER2-203ENST00000372088 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
CCSER2-203ENST00000372088 MYO5CQ9NQX4 1742 aa16.49■□□□□ 0.23
CCSER2-203ENST00000372088 C16orf71Q8IYS4 520 aaPredicted RBP16.49■□□□□ 0.23
CCSER2-203ENST00000372088 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
CCSER2-203ENST00000372088 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
CCSER2-203ENST00000372088 TUBB4AP04350 444 aa16.49■□□□□ 0.23
CCSER2-203ENST00000372088 CEP131Q9UPN4 1083 aa16.49■□□□□ 0.23
CCSER2-203ENST00000372088 G2E3Q7L622 706 aa16.48■□□□□ 0.23
CCSER2-203ENST00000372088 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
CCSER2-203ENST00000372088 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
CCSER2-203ENST00000372088 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
CCSER2-203ENST00000372088 ZNF445P59923 1031 aa16.48■□□□□ 0.23
CCSER2-203ENST00000372088 PRIMPOLQ96LW4 560 aa16.48■□□□□ 0.23
CCSER2-203ENST00000372088 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
CCSER2-203ENST00000372088 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
CCSER2-203ENST00000372088 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
CCSER2-203ENST00000372088 SMC2O95347 1197 aa16.47■□□□□ 0.23
CCSER2-203ENST00000372088 ZKSCAN5Q9Y2L8 839 aa16.47■□□□□ 0.23
CCSER2-203ENST00000372088 KDM5AP29375 1690 aaKnown RBP16.47■□□□□ 0.23
CCSER2-203ENST00000372088 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
CCSER2-203ENST00000372088 IDH1O75874 414 aaKnown RBP16.47■□□□□ 0.23
CCSER2-203ENST00000372088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■■■□□ 17.7
CCSER2-203ENST00000372088 GSDMDP57764 484 aa16.47■□□□□ 0.23
CCSER2-203ENST00000372088 METP08581 1390 aa16.47■□□□□ 0.23
CCSER2-203ENST00000372088 TEX35Q5T0J7 233 aa16.46■□□□□ 0.23
CCSER2-203ENST00000372088 BRF1Q92994 677 aa16.46■□□□□ 0.23
CCSER2-203ENST00000372088 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
CCSER2-203ENST00000372088 SFPQP23246 707 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCSER2-203ENST00000372088 PTCD1O75127 700 aaKnown RBP16.46■□□□□ 0.22
CCSER2-203ENST00000372088 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.22
CCSER2-203ENST00000372088 HSPA4P34932 840 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 LAMC1P11047 1609 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 ANXA1P04083 346 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 EIF4A1P60842 406 aaKnown RBP16.45■□□□□ 0.22
CCSER2-203ENST00000372088 USP19O94966 1318 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 PTCH1Q13635 1447 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 NLRP1Q9C000 1473 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 A0A0U1RQG5 324 aaPredicted RBP16.45■□□□□ 0.22
CCSER2-203ENST00000372088 PES1O00541 588 aaKnown RBP16.45■□□□□ 0.22
CCSER2-203ENST00000372088 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 NCOA7Q8NI08 942 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 TDO2P48775 406 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 UGGT1Q9NYU2 1555 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 ZNF213O14771 459 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 ZNF165P49910 485 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
CCSER2-203ENST00000372088 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
CCSER2-203ENST00000372088 SLC5A1P13866 664 aa16.44■□□□□ 0.22
CCSER2-203ENST00000372088 BRD1O95696 1058 aa16.44■□□□□ 0.22
CCSER2-203ENST00000372088 TSHZ3Q63HK5 1081 aa16.44■□□□□ 0.22
CCSER2-203ENST00000372088 BMP15O95972 392 aa16.44■□□□□ 0.22
CCSER2-203ENST00000372088 ZCRB1Q8TBF4 217 aaKnown RBP16.44■□□□□ 0.22
CCSER2-203ENST00000372088 NAPBQ9H115 298 aa16.44■□□□□ 0.22
CCSER2-203ENST00000372088 SERPINC1P01008 464 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms