RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 NEUROD2Q15784 382 aa26.78■■□□□ 1.88
CUEDC2-201ENST00000369937 NIP7Q9Y221 180 aaKnown RBP eCLIP26.78■■□□□ 1.88
CUEDC2-201ENST00000369937 LAMB4A4D0S4 1761 aa26.77■■□□□ 1.88
CUEDC2-201ENST00000369937 TPTE2Q6XPS3 522 aa26.77■■□□□ 1.88
CUEDC2-201ENST00000369937 RUNDC1Q96C34 613 aa26.77■■□□□ 1.88
CUEDC2-201ENST00000369937 DLEC1Q9Y238 1755 aa26.76■■□□□ 1.88
CUEDC2-201ENST00000369937 KIF6Q6ZMV9 814 aa26.76■■□□□ 1.87
CUEDC2-201ENST00000369937 BABAM1Q9NWV8 329 aa26.76■■□□□ 1.87
CUEDC2-201ENST00000369937 MYL6BP14649 208 aa26.75■■□□□ 1.87
CUEDC2-201ENST00000369937 GTF2E1P29083 439 aaPredicted RBP26.75■■□□□ 1.87
CUEDC2-201ENST00000369937 ZEB1P37275 1124 aaPredicted RBP26.75■■□□□ 1.87
CUEDC2-201ENST00000369937 PRKRIP1Q9H875 184 aaPredicted RBP26.75■■□□□ 1.87
CUEDC2-201ENST00000369937 CNKSR1Q969H4 720 aa26.74■■□□□ 1.87
CUEDC2-201ENST00000369937 KDM2BQ8NHM5 1336 aa26.73■■□□□ 1.87
CUEDC2-201ENST00000369937 FAM177BA6PVY3 158 aa26.73■■□□□ 1.87
CUEDC2-201ENST00000369937 RASSF7Q02833 373 aa26.73■■□□□ 1.87
CUEDC2-201ENST00000369937 ZNF219Q9P2Y4 722 aaPredicted RBP26.73■■□□□ 1.87
CUEDC2-201ENST00000369937 KIF3CO14782 793 aa26.72■■□□□ 1.87
CUEDC2-201ENST00000369937 LMNB1P20700 586 aa26.72■■□□□ 1.87
CUEDC2-201ENST00000369937 HLFQ16534 295 aa26.72■■□□□ 1.87
CUEDC2-201ENST00000369937 STYK1Q6J9G0 422 aa26.72■■□□□ 1.87
CUEDC2-201ENST00000369937 MASTLQ96GX5 879 aa26.72■■□□□ 1.87
CUEDC2-201ENST00000369937 ADAMTS8Q9UP79 889 aa26.72■■□□□ 1.87
CUEDC2-201ENST00000369937 ANKRD31Q8N7Z5 1873 aa26.72■■□□□ 1.87
CUEDC2-201ENST00000369937 ERBB4Q15303 1308 aa26.71■■□□□ 1.87
CUEDC2-201ENST00000369937 ERVV-1B6SEH8 477 aa26.71■■□□□ 1.87
CUEDC2-201ENST00000369937 C21orf2O43822 256 aa26.7■■□□□ 1.86
CUEDC2-201ENST00000369937 SRGNP10124 158 aa26.7■■□□□ 1.86
CUEDC2-201ENST00000369937 EIF2S2P20042 333 aaKnown RBP26.7■■□□□ 1.86
CUEDC2-201ENST00000369937 C16orf71Q8IYS4 520 aaPredicted RBP26.7■■□□□ 1.86
CUEDC2-201ENST00000369937 LAS1LQ9Y4W2 734 aaKnown RBP26.7■■□□□ 1.86
CUEDC2-201ENST00000369937 MAP3K15Q6ZN16 1313 aa26.69■■□□□ 1.86
CUEDC2-201ENST00000369937 NMRK2Q9NPI5 230 aa26.69■■□□□ 1.86
CUEDC2-201ENST00000369937 NYXQ9GZU5 481 aa26.68■■□□□ 1.86
CUEDC2-201ENST00000369937 ZC3H4Q9UPT8 1303 aaKnown RBP26.67■■□□□ 1.86
CUEDC2-201ENST00000369937 TOMM70O94826 608 aa26.67■■□□□ 1.86
CUEDC2-201ENST00000369937 SOGA3Q5TF21 947 aa26.67■■□□□ 1.86
CUEDC2-201ENST00000369937 TTLL7Q6ZT98 887 aa26.67■■□□□ 1.86
CUEDC2-201ENST00000369937 ZBTB3Q9H5J0 574 aa26.67■■□□□ 1.86
CUEDC2-201ENST00000369937 NPR1P16066 1061 aa26.66■■□□□ 1.86
CUEDC2-201ENST00000369937 PRPF40BQ6NWY9 871 aaKnown RBP26.66■■□□□ 1.86
CUEDC2-201ENST00000369937 SBF1O95248 1867 aa26.66■■□□□ 1.86
CUEDC2-201ENST00000369937 COL11A2P13942 1736 aaPredicted RBP26.65■■□□□ 1.86
CUEDC2-201ENST00000369937 NFKBIEO00221 500 aa26.64■■□□□ 1.86
CUEDC2-201ENST00000369937 HSPA6P17066 643 aa26.64■■□□□ 1.86
CUEDC2-201ENST00000369937 TRIM35Q9UPQ4 493 aa26.63■■□□□ 1.85
CUEDC2-201ENST00000369937 CHL1O00533 1208 aa26.62■■□□□ 1.85
CUEDC2-201ENST00000369937 GPTP24298 496 aa26.62■■□□□ 1.85
CUEDC2-201ENST00000369937 TAOK3Q9H2K8 898 aa26.62■■□□□ 1.85
CUEDC2-201ENST00000369937 RRAGCQ9HB90 399 aa26.62■■□□□ 1.85
CUEDC2-201ENST00000369937 KLRG2A4D1S0 409 aaPredicted RBP26.61■■□□□ 1.85
CUEDC2-201ENST00000369937 ALDH1B1P30837 517 aa26.61■■□□□ 1.85
CUEDC2-201ENST00000369937 GIGYF2Q6Y7W6 1299 aaKnown RBP26.61■■□□□ 1.85
CUEDC2-201ENST00000369937 NECTIN2Q92692 538 aa26.61■■□□□ 1.85
CUEDC2-201ENST00000369937 DPY19L2Q6NUT2 758 aa26.6■■□□□ 1.85
CUEDC2-201ENST00000369937 NUTM1Q86Y26 1132 aa26.6■■□□□ 1.85
CUEDC2-201ENST00000369937 GLTPD2A6NH11 291 aa26.59■■□□□ 1.85
CUEDC2-201ENST00000369937 PRELPP51888 382 aa26.59■■□□□ 1.85
CUEDC2-201ENST00000369937 ERFEQ4G0M1 354 aa26.59■■□□□ 1.85
CUEDC2-201ENST00000369937 PPP1R42Q7Z4L9 355 aa26.59■■□□□ 1.85
CUEDC2-201ENST00000369937 NUP98P52948 1817 aa26.59■■□□□ 1.85
CUEDC2-201ENST00000369937 PDIA6Q15084 440 aa26.58■■□□□ 1.85
CUEDC2-201ENST00000369937 CCDC93Q567U6 631 aa26.58■■□□□ 1.85
CUEDC2-201ENST00000369937 LTBP3Q9NS15 1303 aa26.58■■□□□ 1.85
CUEDC2-201ENST00000369937 CACNA1SQ13698 1873 aa26.57■■□□□ 1.84
CUEDC2-201ENST00000369937 ANXA1P04083 346 aa26.57■■□□□ 1.84
CUEDC2-201ENST00000369937 AIMP1Q12904 312 aaKnown RBP26.57■■□□□ 1.84
CUEDC2-201ENST00000369937 PARP10Q53GL7 1025 aa26.57■■□□□ 1.84
CUEDC2-201ENST00000369937 ZNF34Q8IZ26 560 aa26.57■■□□□ 1.84
CUEDC2-201ENST00000369937 RBM46Q8TBY0 533 aaKnown RBP26.57■■□□□ 1.84
CUEDC2-201ENST00000369937 SLX4Q8IY92 1834 aa26.57■■□□□ 1.84
CUEDC2-201ENST00000369937 CALD1Q05682 793 aaKnown RBP26.56■■□□□ 1.84
CUEDC2-201ENST00000369937 PROSER3Q2NL68 480 aa26.56■■□□□ 1.84
CUEDC2-201ENST00000369937 SUSD4Q5VX71 490 aa26.56■■□□□ 1.84
CUEDC2-201ENST00000369937 RPGRQ92834 1020 aaKnown RBP26.56■■□□□ 1.84
CUEDC2-201ENST00000369937 CFAP44Q96MT7 982 aa26.56■■□□□ 1.84
CUEDC2-201ENST00000369937 TNRC6CQ9HCJ0 1690 aaKnown RBP26.55■■□□□ 1.84
CUEDC2-201ENST00000369937 APAF1O14727 1248 aa26.55■■□□□ 1.84
CUEDC2-201ENST00000369937 COPS6Q7L5N1 327 aa26.55■■□□□ 1.84
CUEDC2-201ENST00000369937 UBN2Q6ZU65 1347 aa26.55■■□□□ 1.84
CUEDC2-201ENST00000369937 IBTKQ9P2D0 1353 aaPredicted RBP26.55■■□□□ 1.84
CUEDC2-201ENST00000369937 CCDC88AQ3V6T2 1871 aa26.55■■□□□ 1.84
CUEDC2-201ENST00000369937 ARFGEF2Q9Y6D5 1785 aa26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 FER1L6Q2WGJ9 1857 aa26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 VEGFAP15692 232 aaPredicted RBP26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 KRT24Q2M2I5 525 aa26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 HSP90AB3PQ58FF7 597 aa26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 HDGFL1Q5TGJ6 251 aa26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 XAGE3Q8WTP9 111 aa26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 DDX21Q9NR30 783 aaKnown RBP eCLIP26.54■■□□□ 1.84
CUEDC2-201ENST00000369937 TIAM2Q8IVF5 1701 aa26.53■■□□□ 1.84
CUEDC2-201ENST00000369937 HOXB7P09629 217 aa26.53■■□□□ 1.84
CUEDC2-201ENST00000369937 LRP10Q7Z4F1 713 aa26.53■■□□□ 1.84
CUEDC2-201ENST00000369937 RTKN2Q8IZC4 609 aa26.53■■□□□ 1.84
CUEDC2-201ENST00000369937 C7orf43Q8WVR3 580 aa26.53■■□□□ 1.84
CUEDC2-201ENST00000369937 ABCC12Q96J65 1359 aa26.53■■□□□ 1.84
CUEDC2-201ENST00000369937 CRY2Q49AN0 593 aa26.52■■□□□ 1.84
CUEDC2-201ENST00000369937 UTP14AQ9BVJ6 771 aaKnown RBP26.52■■□□□ 1.84
CUEDC2-201ENST00000369937 APLP1P51693 650 aa26.51■■□□□ 1.83
CUEDC2-201ENST00000369937 FSTL1Q12841 308 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms